Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq4562 159 4e-34 >seq4562 Length=21325 Score = 159 bits (176), Expect = 4e-34 Identities = 478/729 (66%), Gaps = 24/729 (3%) Strand=Plus/Minus Query 110698 TCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTG 110757 |||||| |||| || |||| ||| | |||||||| ||||| | || || | ||||| Sbjct 20712 TCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTG 20653 Query 110758 TGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTT 110817 ||| || ||||| || ||||| || || ||||| ||| || || | ||| | | || Sbjct 20652 TGCAGTAGAGGCAGTCGGCATAGGAGCTATCAATAGAGAATTGCGCAAACCATGTT--TT 20595 Query 110818 G--ATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTT---CCCAC 110872 | || ||| || || ||| ||||||| | || | || | || ||||| Sbjct 20594 GCTATCTTTTCTTTAAGGACAGCCCAGTCCCAA---AGGTCTGTAGGAGTTTTGTCCCAC 20538 Query 110873 ATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCT 110932 || ||| |||| || | |||||| || ||| || | | | || || | |||| Sbjct 20537 ATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTGCTGTATGCACCT 20478 Query 110933 TGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATA 110992 | |||||| |||||||| || || || || | | | ||| || |||||||| || Sbjct 20477 TCTTTTTCAGCTAATTCACAACTAGCTTCTAGTGCACCATAATAAATAGTTTCAAATATT 20418 Query 110993 CGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA-CAAAATAAATAC 111051 | ||| | | |||| || || | | || || ||| | ||| | Sbjct 20417 TGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAAGA-TATTCTCATCAACACAAACGC 20359 Query 111052 ATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGC 111111 ||| || | || |||||||| | |||||||||||| |||| |||||| || || || Sbjct 20358 ATCTGCCATGCCCTGAACACCAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGC 20299 Query 111112 AGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT 111168 ||| || ||||||||||| ||||| ||| ||||| ||||| || ||||| Sbjct 20298 T---TCAGGGACAGGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTACAAT 20242 Query 111169 CTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTT 111228 |||||||||||| | | ||||| | ||| ||| || | | |||| ||| || | Sbjct 20241 CTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTG---TTATTTTCA---ACAAACAT 20188 Query 111229 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 111288 ||| || || || || | ||||| || ||| ||||| | ||||| | | Sbjct 20187 GTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCAC 20128 Query 111289 AATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTT 111348 || ||||| || | ||| || ||||| || || | ||| ||||| |||||||| | Sbjct 20127 AACCTCTGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCT 20068 Query 111349 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408 ||| || |||||||| || | |||||| || || || |||||| || | || | ||| Sbjct 20067 GTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAAT 20008 Query 111409 AGCCTTCCA 111417 | |||||| Sbjct 20007 TGACTTCCA 19999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626823360266400