Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq100195 149 7e-31
seq16499 105 7e-18
>seq100195
Length=1806
Score = 149 bits (164), Expect = 7e-31
Identities = 204/283 (72%), Gaps = 13/283 (5%)
Strand=Plus/Plus
Query 124494 AACTCACGGATGCTGTGCGTCTCACCCGTGCCAATCACGAAATCTTCGGGAATCGACTGC 124553
||||| || | |||||||| ||| |||||| | | |||||| || || || ||||
Sbjct 1419 AACTCGCGCACGCTGTGCGCCTCGCCCGTGGCTACCACGAAGTCCTCTGGTGCGTCCTGC 1478
Query 124554 TGCAACATAAGCCACATGGCTTGGACGTAGTCCTCTGCGTGCCCCCAGTCGCGCTTGGCA 124613
|||| ||| ||||||||||| | |||||||| ||||| |||||||| ||||||
Sbjct 1479 TGCAGCATGAGCCACATGGCCTCCACGTAGTCGCGCGCGTGGCCCCAGTCACGCTTGCTG 1538
Query 124614 TCCAGGTTTCCGAGCTCGATTGGC-----TTGGCCGTCTTGTTCCACTCCGCCAAACCCA 124668
|||||||| |||||||||| || ||||| ||| || || | |||
Sbjct 1539 TCCAGGTTGCCGAGCTCGAGGTGCGACATGAGGCCGAGGTGT--ATCTTGGCGACGCCCC 1596
Query 124669 GTGTAATCTTGCGCGTCACAAA---CTCGGAACCGCGTCGCTCAGACTCGTGGTTGAACA 124725
| || |||||||||||||| || |||| ||||| ||| | ||||||||||||||
Sbjct 1597 GCGTGATCTTGCGCGTCACGAAGTTCTCG---CCGCGGCGCGGACTCTCGTGGTTGAACA 1653
Query 124726 GAATGCCAGTACACGCAAACATCCCGTACGACTCGCGGTAGTT 124768
| | || | ||||| ||||| ||||||| |||||||||||
Sbjct 1654 GCACCCCGTTGCACGCGAACATGCCGTACGCTTCGCGGTAGTT 1696
Score = 140 bits (154), Expect = 4e-28
Identities = 203/282 (72%), Gaps = 11/282 (4%)
Strand=Plus/Plus
Query 158944 AACTCGCGGATGCTGTGCGTCTCTCCAGTCGCAATCACAAAGTCCTCTGGACCGGGCTGT 159003
|||||||| | |||||||| ||| || || || | ||| ||||||||||| || |||
Sbjct 1419 AACTCGCGCACGCTGTGCGCCTCGCCCGTGGCTACCACGAAGTCCTCTGGTGCGTCCTGC 1478
Query 159004 TGGAGCATGAGCCACATGGCCTCGACGTAATCCTGCGCGTGACCCCAGTCGCGCTTGGCA 159063
|| |||||||||||||||||||| ||||| || ||||||| |||||||| ||||||
Sbjct 1479 TGCAGCATGAGCCACATGGCCTCCACGTAGTCGCGCGCGTGGCCCCAGTCACGCTTGCTG 1538
Query 159064 TCCATGTTCCCGAGCTCGA----TGAC-TTTTCCAGACTTTTTCCACTCAGCCAGACCGA 159118
|||| ||| |||||||||| ||| | | || | | || || | ||
Sbjct 1539 TCCAGGTTGCCGAGCTCGAGGTGCGACATGAGGCCGAGGTGT--ATCTTGGCGACGCCCC 1596
Query 159119 GCGTGATCTTGCGCGTCACAAACTCTGCTCCGCGCCGTTCCGA--CTCATGGTTAAACAG 159176
||||||||||||||||||| || | | ||||| || | || ||| ||||| |||||
Sbjct 1597 GCGTGATCTTGCGCGTCACGAAGTTCTCGCCGCGGCG--CGGACTCTCGTGGTTGAACAG 1654
Query 159177 AATGCCGGTACAAGCGAACAGGTTATAGGACTCGCGGTAATT 159218
| ||| | || ||||||| | || | |||||||| ||
Sbjct 1655 CACCCCGTTGCACGCGAACATGCCGTACGCTTCGCGGTAGTT 1696
>seq16499
Length=23041
Score = 105 bits (116), Expect = 7e-18
Identities = 109/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 117287 GTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCA 117346
||| |||| | | | | |||||||||||||| | ||| |||||||| ||||| ||||
Sbjct 12341 GTCAACGGGGACATGAGTGTGAAAATGTAACGGGGGCTCGCAGCATCTTTGCCGCCAGAC 12400
Query 117347 AGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAG 117406
|| || ||||| || || |||| || ||||| ||||| | |||||| | |||||| ||
Sbjct 12401 AGGCGGGTACCAAACTGACCACGGGGTTCCAATAGGTTAATGTTGTTCGACCCCACATAG 12460
Query 117407 TTTTGAGCCAAGTTGACAATCGT 117429
|||||||||| || || || ||
Sbjct 12461 TTTTGAGCCAGATTCACTATTGT 12483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546162889648200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |