Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq9095 134 9e-27
seq58137 118 7e-22
seq21475 100 2e-16
seq27008 95.1 8e-15
seq133270 93.3 3e-14
seq52194 87.8 1e-12
>seq9095
Length=14658
Score = 134 bits (148), Expect = 9e-27
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| ||||| | || ||||| | ||| ||||| |||||||| || |||||
Sbjct 5070 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGTCTGAT 5129
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| || | |||||||||||||| || || || || | | ||||||||| || ||
Sbjct 5130 AGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCGAAAATAAGCCTCTGTTGGTCTGGGGGA 5189
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658
| |||||||| ||| ||| ||||| |||||| | ||||||||| ||| ||
Sbjct 5190 ATCCCCTCCTTATCT-TGAATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAAC 5248
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | || || |||||||| || | |||||| |||||||| |||||
Sbjct 5249 TTCAAGAGTAATAGTTTTACCAGTAAGCGTTTTTACAAAAATTTGCAT 5296
Score = 120 bits (132), Expect = 2e-22
Identities = 167/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| ||||||||||| ||||| | ||| |||||| || || ||||| |||||
Sbjct 4842 CCACCTCTTAGACGCAACACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGAC 4901
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| ||| ||| | ||||| ||||| || || ||||| || | | ||||| || || ||
Sbjct 4902 AATGTGCGCCCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCAGGAGGA 4961
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTC-TTCGCTCTCCA 34657
| || || ||||| ||| |||| |||||| | |||||||| ||| ||||
Sbjct 4962 ATGCCTTCTTTGTC-CTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCT-TCCA 5019
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| | ||| || ||||| || || | |||||||||||||| |||||
Sbjct 5020 CTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5068
Score = 113 bits (124), Expect = 3e-20
Identities = 161/224 (72%), Gaps = 2/224 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|||||||||||||| || | ||| |||||| || || ||||| ||||| | ||| |||
Sbjct 6447 AGACGCAACACCAAGTGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGC 6506
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| ||||| || ||||| || || | | ||||| || || || | || |||
Sbjct 6507 CCATCTTCGAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCC 6566
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTC-TTCGCTCTCCACTTCCACGGT 34667
|||||| |||||| |||| | ||||| || ||| |||||||||| ||
Sbjct 6567 TTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCT-TCCACTTCCAATGT 6625
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711
|| ||||| || ||||| ||||| || || || |||||| |||
Sbjct 6626 GATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCATGATGA 6669
Score = 111 bits (122), Expect = 1e-19
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| |||||||| || ||||| | ||| |||||| || || ||||| |||||
Sbjct 5526 CCACCTCTTAGACGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGAC 5585
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| ||| ||| | ||||| ||||| || || || || || | | ||||| || || ||
Sbjct 5586 AATGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGAGGA 5645
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTC-GCTCTCCA 34657
| || || ||||| |||||| | |||||| | |||||||| ||| ||||
Sbjct 5646 ATGCCTTCTTTGTCCTGAATCTTT-GCTTTAACATTTTCGATTGTGTCAGAAGCT-TCCA 5703
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| | ||| || ||||| || || | |||||||||||||| |||||
Sbjct 5704 CTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5752
Score = 93.3 bits (102), Expect = 3e-14
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| || |||| || || || | ||| ||||||||||| ||||| || ||
Sbjct 5298 CCACCTCTTAGCCGCAGAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAGTCAGAC 5357
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | ||||| || ||||| || || || || | | ||||||||| || ||
Sbjct 5358 AGAGTGCGTCCATCTTCTAGCTGTTTGCCAGCGAAAATCAGCCTCTGTTGGTCTGGAGGA 5417
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTC-TTCGCTCTCCA 34657
| || ||||||||| ||| ||| | ||||| | ||||| || ||| ||||
Sbjct 5418 ATACCTTCCTTGTCT-TGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCT-TCCA 5475
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||||| || || ||||| || || | || || |||||||| |||||
Sbjct 5476 CTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 5524
>seq58137
Length=8097
Score = 118 bits (130), Expect = 7e-22
Identities = 168/234 (72%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | ||||||||| ||||| || ||||| || |||||||| || || || |||
Sbjct 7759 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAA 7700
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || ||||||| | ||| || || || || || ||||| ||||| || || ||
Sbjct 7699 AGGGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 7640
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| ||| ||| | ||| || | ||| || || || ||
Sbjct 7639 ATGCCTTCCTTGTCT-TGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAAC 7581
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGAT 34712
||||| || || |||||||| || | ||||||||||| |||||||| |||||
Sbjct 7580 TTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTTGAT 7527
>seq21475
Length=13715
Score = 100 bits (110), Expect = 2e-16
Identities = 163/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 34472 AATCGTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTAT 34531
||| || || || | ||| || | ||| | ||| | ||| |||||||||||||| |
Sbjct 11130 AATAGTTACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGT 11071
Query 34532 AATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGT 34591
| || || | ||| || | ||||| ||||||||||| ||||| || ||||| || ||||
Sbjct 11070 AGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGT 11011
Query 34592 CCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGC 34651
| || || | || ||||| ||| ||| || ||||| | || || || |
Sbjct 11010 CTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGG 10951
Query 34652 TCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||||| || | ||| || |||||||| || | || || || ||||| |||||
Sbjct 10950 CCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 10896
>seq27008
Length=12848
Score = 95.1 bits (104), Expect = 8e-15
Identities = 126/173 (73%), Gaps = 4/173 (2%)
Strand=Plus/Minus
Query 46826 GGATGGCCCGTCAC--TTTTATTACACCCGAAGTGATGGCACGTAACGGATTTTATTATC 46883
|||||||||||||| ||||||| ||||||| | || | || || || |||||||
Sbjct 4818 GGATGGCCCGTCACATTTTTATT--ACCCGAATCACTCGCGAGGAATGGCTTCTATTATC 4761
Query 46884 TTGGAAGAGGTGATGAAGTTCGATGCGCCTTTTGCAAGGTTGAGATCATGCGTTGGGAAG 46943
| || | || |||||||| || ||||| ||||| || || || || ||| |||| |
Sbjct 4760 TGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAAATTATGAAATGGGTTG 4701
Query 46944 AGGGTGATGATCCTGCCGAAGACCATAAACGTTGGGCTCCTCAGTGTCCGTTC 46996
||| || ||||| ||| | ||||| | || ||||| || ||||| || |||
Sbjct 4700 CGGGCGACGATCCCGCCAAGGACCACCAGCGCTGGGCGCCCCAGTGCCCCTTC 4648
>seq133270
Length=334
Score = 93.3 bits (102), Expect = 3e-14
Identities = 132/183 (72%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 34525 ATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGC 34584
||||| || || || || || || | ||||| | ||| ||||||||||| || | ||||
Sbjct 2 ATGTTGTAGTCAGACAGGGTGCGACCATCTTCCAATTGCTTACCGGCAAAGATAAGACGC 61
Query 34585 TGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTG-TTTTAACGATAAAATTGT 34643
|| || || || || | ||||| |||||| ||| ||| | ||||| | ||| ||
Sbjct 62 TGCTGATCAGGAGGGATGCCCTCTTTGTCT-TGAATTTTAGCTTTTACATTTTCAATAGT 120
Query 34644 GTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTG 34703
|| | |||||||||| ||| || || || || |||| ||||| |||||||||||
Sbjct 121 ATCAGAGGGTTCCACTTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTG 180
Query 34704 CAT 34706
|||
Sbjct 181 CAT 183
>seq52194
Length=4646
Score = 87.8 bits (96), Expect = 1e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | || ||||| | || || ||||| ||||||||||| ||
Sbjct 3434 CCACCGCGAAGACGAAGTACTAAATGCAAGGTAGATTCTTTTTGGATGTTATAATCCGAC 3493
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | || || | |||||||| ||||| || | |||||||||||| || ||
Sbjct 3494 AGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGA 3553
Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622
| |||||||||||| ||||||
Sbjct 3554 ATGCCCTCCTTGTCTTGGATCTT 3576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314139049148447
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |