Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq58137 111 1e-19
seq9095 105 5e-18
seq21475 82.4 5e-11
>seq58137
Length=8097
Score = 111 bits (122), Expect = 1e-19
Identities = 165/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846
|||||||| || ||||||||||| ||||| || ||| ||||| | || || |||
Sbjct 7530 AAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCT 7589
Query 27847 ACCG--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
||| || || | ||| || ||| ||||| ||||| ||||| |||| |
Sbjct 7590 TCCGATACTATTGAAAAT--GTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAG 7647
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| || ||||| || ||||| || ||||| |||||||| |||| ||||| | | || || |
Sbjct 7648 ATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACCCTTTCTGACT 7707
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||| || |||||||| ||| | || ||||| |||||| | ||||| ||
Sbjct 7708 ACAATATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCGTGGTGG 7759
>seq9095
Length=14658
Score = 105 bits (116), Expect = 5e-18
Identities = 156/221 (71%), Gaps = 10/221 (5%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||||||||||||||| || ||||| ||| |||||| | || || ||| |
Sbjct 5068 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 5009
Query 27850 GACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
||| ||||||| || ||| ||| || ||||||||||| |||| |
Sbjct 5008 GAC-----ACAATCGAAAATGTTAAAGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTG 4954
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| || ||| | | |||||||| ||||| ||| |||| || | |||| ||||| || |
Sbjct 4953 ATCAACAAAGACTGATTTTTGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACT 4894
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGT 28005
| || ||||| || ||| ||||||||||| || ||||||
Sbjct 4893 ATAATATCCAGAAGGAGTCTACTTTGCATTTAGTGTTGCGT 4853
Score = 102 bits (112), Expect = 6e-17
Identities = 155/221 (70%), Gaps = 10/221 (5%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||||||||||||||| || ||||| ||| |||||| | || || ||| |
Sbjct 5752 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 5693
Query 27850 GACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
||| ||||||| || ||| ||| || ||||||||||| |||| |
Sbjct 5692 GAC-----ACAATCGAAAATGTTAAAGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTG 5638
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| || ||| | | ||||| || ||||| ||| |||| || | |||| ||||| || |
Sbjct 5637 ATCAACAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACT 5578
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGT 28005
| || ||||| || ||| ||||||||||| || ||||||
Sbjct 5577 ATAATATCCAGAAGGAGTCTACTTTGCATTTAGTCTTGCGT 5537
>seq21475
Length=13715
Score = 82.4 bits (90), Expect = 5e-11
Identities = 141/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848
|||||||||||| || || || ||||| || ||| ||||| | || || || | |
Sbjct 10895 AATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTC 10954
Query 27849 CGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCA 27908
|| | || || || ||| ||||| || || |||||| |||| || ||
Sbjct 10955 TGATACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCA 11014
Query 27909 GCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAA 27968
|||||| || || ||||| || |||||| | || || | ||| | ||||| || |||||
Sbjct 11015 GCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAA 11074
Query 27969 CATCCAAAAAGAGAGCACTTTGCAT 27993
||| ||||| || ||| ||||||
Sbjct 11075 CATTCAAAAGGAATCCACATTGCAT 11099
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355194668577993
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |