Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq52194 159 8e-34 seq58137 145 2e-29 seq9095 145 2e-29 seq133270 96.9 8e-15 >seq52194 Length=4646 Score = 159 bits (176), Expect = 8e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| ||||||||||| ||||| || || || | ||||| | |||||| Sbjct 3905 AGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCT 3964 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||| ||||| || ||||||||||| |||||||| || ||||||| ||||||||| || Sbjct 3965 TCCAGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCT 4024 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| ||| || ||||| |||||||| || || || || | ||| || || Sbjct 4025 TGAATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGCTCTACTTCCAAAGTTATTGTT 4084 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| || || || || ||||| | |||||| Sbjct 4085 TTTCCAGTAAGTGTTTTGACAAATATTTGCATT 4117 Score = 156 bits (172), Expect = 1e-32 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| | |||||||||||| || || || || || | || || | ||||| |||||||| Sbjct 3685 GTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGACCATCCTCCAGCTG 3744 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 |||||| ||||| || || |||||||| || || |||| ||| || ||||| |||||||| Sbjct 3745 CTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATTCCCTCTTTGTCTTGGATCTT 3804 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||| || ||||| || ||||| ||| |||||| || | ||||| || || || || Sbjct 3805 GGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTTCCCTGT 3864 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 ||| ||||||||||| | |||||| Sbjct 3865 GAGTGTCTTTACAAAGATCTGCAT 3888 Score = 152 bits (168), Expect = 1e-31 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || |||||||||||||||||||||| || || | ||||| |||| ||| || || Sbjct 3464 GTAGATTCTTTTTGGATGTTATAATCCGACAGAGTGCGGCCATCCTCCAACTGTTTACCA 3523 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || ||||| || || |||||||| || |||| || |||||||| |||||||| || Sbjct 3524 GCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTA 3583 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || |||||||| ||||| || |||||||| | |||||| ||||| || || |||||| Sbjct 3584 ACATTTTCGATAGTGTCGGATGGCTCAACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTC 3643 Query 211098 TTTACAAACACCTGCAT 211114 || || || | |||||| Sbjct 3644 TTAACGAAGATCTGCAT 3660 Score = 150 bits (166), Expect = 4e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 ||||| || ||||| ||||||||||| || |||| | ||| | ||||||||||||||| Sbjct 4375 TGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGATAAGGTACGTCCATCTTCCAGCTGT 4434 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 ||||| || |||||||| |||||||| || || |||| || || || || || ||||| Sbjct 4435 TTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGGAATACCCTCTTTATCTTGAATCTTA 4494 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 || || ||||| ||||||||||| || || || ||||| || ||||| || || Sbjct 4495 GCCTTTACATTTTCAATGGTGTCAGACGGCTCTACTTCCAGAGTTATAGTCTTGCCTGTT 4554 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| | ||||| Sbjct 4555 AGTGTCTTGACAAATATTTGCAT 4577 >seq58137 Length=8097 Score = 145 bits (160), Expect = 2e-29 Identities = 167/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | | || | ||||||||| || |||||||| || || || || | |||||| Sbjct 7754 ACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGGGT 7695 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||| ||||||| ||||| || ||||| || | |||||||| || ||||||| || Sbjct 7694 GCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCC 7635 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||| || || || ||| || ||||| || || || || |||||| || | Sbjct 7634 TTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAA 7575 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||| || || || ||||| || || || ||||| | ||||||||| Sbjct 7574 AGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 7530 >seq9095 Length=14658 Score = 145 bits (160), Expect = 2e-29 Identities = 164/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 210896 AAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCT 210955 |||||| || |||||||||||||| || ||||| ||||| ||||| || | | || | Sbjct 4622 AAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGGATATTATAGTCTGACAATGTACG 4681 Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 ||||||||||| ||||| || || || || || | |||||| || ||||||| ||||| Sbjct 4682 CCCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCTGGAGGAATACCTTC 4741 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075 |||||| || || || || || ||||| || || ||||| ||| || || | ||| Sbjct 4742 CTTGTCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGT 4801 Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||| || || || || || |||||||| || | |||||| Sbjct 4802 GATAGTTTTCCCAGTCAGTGTCTTTACGAAAATTTGCATT 4841 Score = 138 bits (152), Expect = 3e-27 Identities = 150/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976 ||| || || || || || || || || | || || | ||||||||| |||||||| || Sbjct 5783 AGTAGATTCCTTCTGAATATTGTAGTCAGACAGTGTGCGTCCATCTTCAAGCTGCTTTCC 5842 Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036 || || ||||| | ||||||||| ||||||| ||||||||| || || || || || Sbjct 5843 AGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATTCCTTCCTTATCTTGAATTTTGGCCTT 5902 Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096 || |||||||| ||||||||| ||||| || || ||||| || || || || || || Sbjct 5903 AACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTTTTGCCAGTCAGTGT 5962 Query 211097 CTTTACAAACACCTGCATT 211115 ||||||||| | |||||| Sbjct 5963 CTTTACAAATATTTGCATT 5981 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| | ||| || || ||||| || ||||| || | || || | ||||||| Sbjct 5313 AGAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAGTCAGACAGAGTGCGTCCATCT 5372 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||| ||||| ||||| || || | |||||||| ||||||| ||||||||||| Sbjct 5373 TCTAGCTGTTTGCCAGCGAAAATCAGCCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCT 5432 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || || || || || ||||| || || ||||| ||| || || | |||||| || Sbjct 5433 TGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTT 5492 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || || ||||||||||| | |||||| Sbjct 5493 TTCCCAGTCAGTGTCTTTACAAAAATTTGCATT 5525 Score = 132 bits (146), Expect = 1e-25 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976 ||| ||||| || ||||| ||||| || | | || | ||||||||||| ||||| || Sbjct 5555 AGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCCAGTTGCTTTCC 5614 Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036 ||||| || || | |||||| |||||||||| ||||| |||||||| |||||| ||| Sbjct 5615 AGCGAAAATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTGTCCTGAATCTTTGCTTT 5674 Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096 || |||||||| |||||||| ||| || || | || || || || || || || || Sbjct 5675 AACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATAGTTTTGCCAGTCAGTGT 5734 Query 211097 CTTTACAAACACCTGCAT 211114 || ||||| | ||||| Sbjct 5735 TTTCACAAAAATTTGCAT 5752 Score = 127 bits (140), Expect = 5e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976 ||| ||||| || ||||| ||||| || | | || | ||||||||||| ||||| || Sbjct 4871 AGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCCAGTTGCTTTCC 4930 Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036 || || || || | |||||| |||||||||| ||||| |||||||| |||||| ||| Sbjct 4931 AGCAAAAATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTGTCCTGAATCTTTGCTTT 4990 Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096 || |||||||| |||||||| ||| || || | || || || || || || || || Sbjct 4991 AACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATAGTTTTGCCAGTCAGTGT 5050 Query 211097 CTTTACAAACACCTGCAT 211114 || ||||| | ||||| Sbjct 5051 TTTCACAAAAATTTGCAT 5068 Score = 125 bits (138), Expect = 2e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| | ||| ||||| || ||||| ||||| || | | || | |||||||| || || Sbjct 6461 GTGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCGAGTTG 6520 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || ||||| || || | |||||| || ||||||| ||||||||||| || ||||| Sbjct 6521 CTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTT 6580 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 | || ||||||||||| || ||||| ||| || || | ||||| || || || || Sbjct 6581 TGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGT 6640 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 | ||| ||||| || | ||||| Sbjct 6641 TAAAGTTTTTACGAAGATTTGCAT 6664 >seq133270 Length=334 Score = 96.9 bits (106), Expect = 8e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| | ||| || |||||||||||||| || || | || || | |||||| Sbjct 200 AGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGATAGTGTACGACCATCT 259 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || | |||||||| || || ||||| |||||||| || ||||||| ||||| ||||| Sbjct 260 TCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTCT 319 Query 211023 TGGATCTT 211030 ||||| || Sbjct 320 TGGATTTT 327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1156865457127035