Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq30827 111 1e-19
seq101375 98.7 9e-16
seq30828 98.7 9e-16
>seq30827
Length=2392
Score = 111 bits (122), Expect = 1e-19
Identities = 229/331 (69%), Gaps = 10/331 (3%)
Strand=Plus/Plus
Query 14715 AATTTGATAGCTACAACGATTACGTGGTGGCGGCGACATATTTTGACGGAAAGAAGGTGA 14774
||||||| | ||||| |||||| | |||| | |||||||| | |||| | |
Sbjct 234 AATTTGACAAATACAATGATTACATTCTGGCTTTAAATTATTTTGATGCAAAGGCTATTA 293
Query 14775 ACTACAACAGCGGTTTGTTTTACTATGTTCTGTGGAA-AT-TGTGCAGCGCCAAAAAGTG 14832
| ||||||| ||||||||||| ||||| |||||||| || |||| | || ||| | ||
Sbjct 294 AATACAACAAGGGTTTGTTTTATTATGTACTGTGGAATATATGTG-ATCG-TAAAGAATG 351
Query 14833 GATGAACCAAAATGTGCTTGACCAATT--TTGGAAATACGTTAA-ACTTCGCTTACAAAA 14889
|||| ||| |||||| |||| |||| | | ||| ||||| | | |||| |
Sbjct 352 GATGGACCGAAATGTTGTTGAAAAATTCAAAGAATATATGTTAAGGCGT--ATTAC-CGA 408
Query 14890 CACTACATGCAAGCTAGGTCTTTCGTCGCTTCCTATGGACCCGCCCATGAAAACATCACT 14949
|| | |||| | | ||||| | || |||||| |||| || || |||| |||||
Sbjct 409 GACAAAATGCTATATTGGTCTGACCTCCCTTCCTTTGGATCCCTTAATACAAACGTCACT 468
Query 14950 ACTAACAGCCCTGTGGTACTGTGTTGAGTTGTCGTCCGACATATTTAAACACGACCAATT 15009
|| |||| || ||||| ||||| || | || || | ||||||||| |||| |
Sbjct 469 ACCTGCAGCTCTCTGGTATTGTGTAGAAATTTCATCATATATATTTAAAGACGATGACGC 528
Query 15010 ACATTACACCAATGAAAGACTGCGACTTTAT 15040
||||||| |||| ||||| ||| | ||||
Sbjct 529 ACATTACTCCAAAGAAAGGTTGCAAAATTAT 559
>seq101375
Length=1150
Score = 98.7 bits (108), Expect = 9e-16
Identities = 225/330 (68%), Gaps = 8/330 (2%)
Strand=Plus/Plus
Query 14715 AATTTGATAGCTACAACGATTACGTGGTGGCGGCGACATATTTTGACGGAAAGAAGGTGA 14774
||||||| | ||||| |||||| | |||| | |||||||| |||| | |
Sbjct 255 AATTTGACAAATACAATGATTACATTCTGGCTTTAAATTATTTTGATTCAAAGGCTATTA 314
Query 14775 ACTACAACAGCGGTTTGTTTTACTATGTTCTGTGGAA-AT-TGTGCAGCGCCAAAAAGTG 14832
| ||||| | ||||||||||| ||||| |||||||| || |||| | || || || ||
Sbjct 315 AATACAATAAGGGTTTGTTTTATTATGTACTGTGGAATATATGTG-ATCGTAAAGAA-TG 372
Query 14833 GATGAACCAAAATGTGCTTGACCAATTTTG-GAA-ATACGTTAAACTTCGCTTACAAAAC 14890
|||| ||| |||||| | || |||| ||| ||| ||||| | | | ||||
Sbjct 373 GATGGACCGAAATGTTGTAGAAAAATTCAAAGAATATATGTTAAGGCGTGTTACCGAAAC 432
Query 14891 ACTACATGCAAGCTAGGTCTTTCGTCGCTTCCTATGGACCCGCCCATGAAAACATCACTA 14950
| | ||| | | ||||| | || |||||| |||| || || |||| ||||||
Sbjct 433 A--AAATGTTATATTGGTCTGACCTCCCTTCCTTTGGATCCCTTAATACAAACGTCACTA 490
Query 14951 CTAACAGCCCTGTGGTACTGTGTTGAGTTGTCGTCCGACATATTTAAACACGACCAATTA 15010
| |||| || ||||| ||||| || | || || ||||||||||| |||| |
Sbjct 491 CCTGCAGCTCTCTGGTATTGTGTAGAAATTTCATCATACATATTTAAAGACGATGACGCG 550
Query 15011 CATTACACCAATGAAAGACTGCGACTTTAT 15040
|||||| |||| ||||| ||| | ||||
Sbjct 551 CATTACTCCAAAGAAAGGTTGCAAAATTAT 580
>seq30828
Length=2787
Score = 98.7 bits (108), Expect = 9e-16
Identities = 225/330 (68%), Gaps = 8/330 (2%)
Strand=Plus/Plus
Query 14715 AATTTGATAGCTACAACGATTACGTGGTGGCGGCGACATATTTTGACGGAAAGAAGGTGA 14774
||||||| | ||||| |||||| | |||| | |||||||| |||| | |
Sbjct 596 AATTTGACAAATACAATGATTACATTCTGGCTTTAAATTATTTTGATTCAAAGGCTATTA 655
Query 14775 ACTACAACAGCGGTTTGTTTTACTATGTTCTGTGGAA-AT-TGTGCAGCGCCAAAAAGTG 14832
| ||||||| ||||||||||| ||||| |||||||| || |||| | || || || ||
Sbjct 656 AATACAACAAGGGTTTGTTTTATTATGTACTGTGGAATATATGTG-ATCGTAAAGAA-TG 713
Query 14833 GATGAACCAAAATGTGCTTGACCAATTTTG-GAA-ATACGTTAAACTTCGCTTACAAAAC 14890
|||| ||| |||||| || |||| ||| ||| ||||| | | | ||||
Sbjct 714 GATGGACCGAAATGTTGCAGAAAAATTCAAAGAATATATGTTAAGGCGTGTTGCCGAAAC 773
Query 14891 ACTACATGCAAGCTAGGTCTTTCGTCGCTTCCTATGGACCCGCCCATGAAAACATCACTA 14950
| | |||| | | ||| | | || |||||| |||| || || |||| |||||
Sbjct 774 A--AAATGCTATATTGGTTTGACCTCCCTTCCTTTGGATCCCTTAATACAAACGTCACTG 831
Query 14951 CTAACAGCCCTGTGGTACTGTGTTGAGTTGTCGTCCGACATATTTAAACACGACCAATTA 15010
| |||| || ||||| ||||| || | || || ||||||||||| |||| |
Sbjct 832 CCTGCAGCTCTCTGGTATTGTGTAGAAATTTCATCATACATATTTAAAGACGATAACGCG 891
Query 15011 CATTACACCAATGAAAGACTGCGACTTTAT 15040
|||||| |||| |||||| ||| | ||||
Sbjct 892 CATTACTCCAAAGAAAGATTGCAAAATTAT 921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428739611240567
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |