Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq30827 111 1e-19 seq101375 98.7 9e-16 seq30828 98.7 9e-16 >seq30827 Length=2392 Score = 111 bits (122), Expect = 1e-19 Identities = 229/331 (69%), Gaps = 10/331 (3%) Strand=Plus/Plus Query 14715 AATTTGATAGCTACAACGATTACGTGGTGGCGGCGACATATTTTGACGGAAAGAAGGTGA 14774 ||||||| | ||||| |||||| | |||| | |||||||| | |||| | | Sbjct 234 AATTTGACAAATACAATGATTACATTCTGGCTTTAAATTATTTTGATGCAAAGGCTATTA 293 Query 14775 ACTACAACAGCGGTTTGTTTTACTATGTTCTGTGGAA-AT-TGTGCAGCGCCAAAAAGTG 14832 | ||||||| ||||||||||| ||||| |||||||| || |||| | || ||| | || Sbjct 294 AATACAACAAGGGTTTGTTTTATTATGTACTGTGGAATATATGTG-ATCG-TAAAGAATG 351 Query 14833 GATGAACCAAAATGTGCTTGACCAATT--TTGGAAATACGTTAA-ACTTCGCTTACAAAA 14889 |||| ||| |||||| |||| |||| | | ||| ||||| | | |||| | Sbjct 352 GATGGACCGAAATGTTGTTGAAAAATTCAAAGAATATATGTTAAGGCGT--ATTAC-CGA 408 Query 14890 CACTACATGCAAGCTAGGTCTTTCGTCGCTTCCTATGGACCCGCCCATGAAAACATCACT 14949 || | |||| | | ||||| | || |||||| |||| || || |||| ||||| Sbjct 409 GACAAAATGCTATATTGGTCTGACCTCCCTTCCTTTGGATCCCTTAATACAAACGTCACT 468 Query 14950 ACTAACAGCCCTGTGGTACTGTGTTGAGTTGTCGTCCGACATATTTAAACACGACCAATT 15009 || |||| || ||||| ||||| || | || || | ||||||||| |||| | Sbjct 469 ACCTGCAGCTCTCTGGTATTGTGTAGAAATTTCATCATATATATTTAAAGACGATGACGC 528 Query 15010 ACATTACACCAATGAAAGACTGCGACTTTAT 15040 ||||||| |||| ||||| ||| | |||| Sbjct 529 ACATTACTCCAAAGAAAGGTTGCAAAATTAT 559 >seq101375 Length=1150 Score = 98.7 bits (108), Expect = 9e-16 Identities = 225/330 (68%), Gaps = 8/330 (2%) Strand=Plus/Plus Query 14715 AATTTGATAGCTACAACGATTACGTGGTGGCGGCGACATATTTTGACGGAAAGAAGGTGA 14774 ||||||| | ||||| |||||| | |||| | |||||||| |||| | | Sbjct 255 AATTTGACAAATACAATGATTACATTCTGGCTTTAAATTATTTTGATTCAAAGGCTATTA 314 Query 14775 ACTACAACAGCGGTTTGTTTTACTATGTTCTGTGGAA-AT-TGTGCAGCGCCAAAAAGTG 14832 | ||||| | ||||||||||| ||||| |||||||| || |||| | || || || || Sbjct 315 AATACAATAAGGGTTTGTTTTATTATGTACTGTGGAATATATGTG-ATCGTAAAGAA-TG 372 Query 14833 GATGAACCAAAATGTGCTTGACCAATTTTG-GAA-ATACGTTAAACTTCGCTTACAAAAC 14890 |||| ||| |||||| | || |||| ||| ||| ||||| | | | |||| Sbjct 373 GATGGACCGAAATGTTGTAGAAAAATTCAAAGAATATATGTTAAGGCGTGTTACCGAAAC 432 Query 14891 ACTACATGCAAGCTAGGTCTTTCGTCGCTTCCTATGGACCCGCCCATGAAAACATCACTA 14950 | | ||| | | ||||| | || |||||| |||| || || |||| |||||| Sbjct 433 A--AAATGTTATATTGGTCTGACCTCCCTTCCTTTGGATCCCTTAATACAAACGTCACTA 490 Query 14951 CTAACAGCCCTGTGGTACTGTGTTGAGTTGTCGTCCGACATATTTAAACACGACCAATTA 15010 | |||| || ||||| ||||| || | || || ||||||||||| |||| | Sbjct 491 CCTGCAGCTCTCTGGTATTGTGTAGAAATTTCATCATACATATTTAAAGACGATGACGCG 550 Query 15011 CATTACACCAATGAAAGACTGCGACTTTAT 15040 |||||| |||| ||||| ||| | |||| Sbjct 551 CATTACTCCAAAGAAAGGTTGCAAAATTAT 580 >seq30828 Length=2787 Score = 98.7 bits (108), Expect = 9e-16 Identities = 225/330 (68%), Gaps = 8/330 (2%) Strand=Plus/Plus Query 14715 AATTTGATAGCTACAACGATTACGTGGTGGCGGCGACATATTTTGACGGAAAGAAGGTGA 14774 ||||||| | ||||| |||||| | |||| | |||||||| |||| | | Sbjct 596 AATTTGACAAATACAATGATTACATTCTGGCTTTAAATTATTTTGATTCAAAGGCTATTA 655 Query 14775 ACTACAACAGCGGTTTGTTTTACTATGTTCTGTGGAA-AT-TGTGCAGCGCCAAAAAGTG 14832 | ||||||| ||||||||||| ||||| |||||||| || |||| | || || || || Sbjct 656 AATACAACAAGGGTTTGTTTTATTATGTACTGTGGAATATATGTG-ATCGTAAAGAA-TG 713 Query 14833 GATGAACCAAAATGTGCTTGACCAATTTTG-GAA-ATACGTTAAACTTCGCTTACAAAAC 14890 |||| ||| |||||| || |||| ||| ||| ||||| | | | |||| Sbjct 714 GATGGACCGAAATGTTGCAGAAAAATTCAAAGAATATATGTTAAGGCGTGTTGCCGAAAC 773 Query 14891 ACTACATGCAAGCTAGGTCTTTCGTCGCTTCCTATGGACCCGCCCATGAAAACATCACTA 14950 | | |||| | | ||| | | || |||||| |||| || || |||| ||||| Sbjct 774 A--AAATGCTATATTGGTTTGACCTCCCTTCCTTTGGATCCCTTAATACAAACGTCACTG 831 Query 14951 CTAACAGCCCTGTGGTACTGTGTTGAGTTGTCGTCCGACATATTTAAACACGACCAATTA 15010 | |||| || ||||| ||||| || | || || ||||||||||| |||| | Sbjct 832 CCTGCAGCTCTCTGGTATTGTGTAGAAATTTCATCATACATATTTAAAGACGATAACGCG 891 Query 15011 CATTACACCAATGAAAGACTGCGACTTTAT 15040 |||||| |||| |||||| ||| | |||| Sbjct 892 CATTACTCCAAAGAAAGATTGCAAAATTAT 921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428739611240567