Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq58137 131 1e-25 seq52194 129 4e-25 seq9095 123 2e-23 seq133270 116 2e-21 >seq58137 Length=8097 Score = 131 bits (144), Expect = 1e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| || || ||||| || ||||| ||||| || ||| | |||||||| | Sbjct 7530 AAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCT 7589 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | || ||| |||||| ||||| |||||| ||||| ||||| | || |||||| Sbjct 7590 TCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 7649 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 ||||| ||||| || || || || || ||| ||||||||| |||||| | || ||| Sbjct 7650 CAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACCCTTTCTGACTAC 7709 Query 23788 AACATACAAAAAGAGTCCAC 23807 || || |||||||| || || Sbjct 7710 AATATTCAAAAAGAATCTAC 7729 >seq52194 Length=4646 Score = 129 bits (142), Expect = 4e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || ||||| || ||||| ||||| | |||||||| || | Sbjct 3888 ATGCAGATCTTTGTAAAGACACTCACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 3829 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||||| | ||||| | || | | |||||||| || | || |||||||| Sbjct 3828 GACACTATTGAAAATGTTAAAGCCAAGA-TCCAAGACAAAGAGGGAATTCCCCCAGATCA 3770 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| | || || || ||||| || ||||| || | || ||| | || ||||| Sbjct 3769 ACAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGTCGTACTCTCTCTGACTACAA 3710 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || ||||||||||| || || || || ||| | || |||||||| Sbjct 3709 TATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTTTACGAGGAGG 3662 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || || || || || || || || || ||||| ||||| || | | Sbjct 4577 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAAGTAGAGCCGTCT 4518 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||||| |||| || ||| || ||||| ||| | || ||||||||| Sbjct 4517 GACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCAA 4458 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || |||||||||||||| |||||||| | ||| || ||| || |||||| Sbjct 4457 CAACGTCTTATCTTTGCCGGCAAACAGCTGGAAGATGGACGTACCTTATCGGACTACAAC 4398 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||| ||||| || | |||||||| | | ||||||| || Sbjct 4397 ATCCAAAAGGAGTCTACCCTTCATTTAGTACTGCGTCTGCGAGGTGG 4351 Score = 104 bits (114), Expect = 2e-17 Identities = 144/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || || ||||| || || |||||||| || ||| | ||||| || | | Sbjct 4117 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTAGAGCCATC 4058 Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| |||||| | ||||| | || | || || || ||||| | || ||||||| Sbjct 4057 CGACACCATTGAAAATGTTAAAGCTAAGA-TTCAAGATAAGGAAGGAATTCCTCCAGATC 3999 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 |||| ||| | || || || || || ||||||||||| | ||||| | || |||| Sbjct 3998 AACAACGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGCCGCACCCTGTCTGACTACA 3939 Query 23789 ACATACAAAAAGAGTCCAC 23807 | || || ||||||||||| Sbjct 3938 ATATCCAGAAAGAGTCCAC 3920 >seq9095 Length=14658 Score = 123 bits (136), Expect = 2e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || ||||| || || || ||||| || ||||| |||||||| | | Sbjct 5296 ATGCAAATTTTTGTAAAAACGCTTACTGGTAAAACTATTACTCTTGAAGTTGAGCCTTCT 5237 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||||| | ||||| |||||| || || || || || | || ||||| || Sbjct 5236 GACACAATTGAAAATGTTAAAGCAAAAA-TTCAAGATAAGGAGGGGATTCCCCCAGACCA 5178 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | | || || || || |||||||| ||||| | |||||| || || ||||| Sbjct 5177 ACAGAGGCTTATTTTCGCTGGAAAACAACTTGAAGATGGACGCACACTATCAGACTACAA 5118 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| || || || || || ||||||||||| Sbjct 5117 CATTCAGAAGGAATCTACTTTACATTTAGT 5088 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| |||||||| || || || || || || || |||||| | |||||||| | | Sbjct 6437 AATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTAGAAGTTGAGCCTTC 6378 Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || || |||||| | ||||| | |||| || || ||||| || | || ||||||| Sbjct 6377 TGATACAATTGAAAATGTTAAAGCGAAAA-TTCAGGATAAAGAGGGAATTCCCCCAGATC 6319 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | || | | || ||||| || || || || ||||| | |||||| || ||||||| Sbjct 6318 AGCAAAGACTTATTTTTGCTGGAAAGCAGCTAGAAGATGGACGCACACTATCTGATTACA 6259 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 |||| || ||||| || || || || |||| || || || |||| ||| Sbjct 6258 ACATTCAGAAAGAATCTACTTTGCACCTAGTACTACGGCTGAGAGGTGGA 6209 Score = 102 bits (112), Expect = 5e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || ||||| || || || ||||| || || | ||||| || | | Sbjct 5068 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 5009 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | |||| | ||||| |||| | || ||||||||||| | || || ||||| Sbjct 5008 GACACAATCGAAAATGTTAAAGCAAAGA-TTCAGGACAAAGAAGGCATTCCTCCTGATCA 4950 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || ||||||||||| | ||||| || || || || Sbjct 4949 ACAAAGACTGATTTTTGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAA 4890 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTT 23822 || || || ||||| || || |||||||| || Sbjct 4889 TATCCAGAAGGAGTCTACTTTGCATTTAGTGTT 4857 Score = 98.7 bits (108), Expect = 7e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || ||||| || || || ||||| || || | ||||| || | | Sbjct 5752 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 5693 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | |||| | ||||| |||| | || ||||||||||| | || || ||||| Sbjct 5692 GACACAATCGAAAATGTTAAAGCAAAGA-TTCAGGACAAAGAAGGCATTCCTCCTGATCA 5634 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || || || || || ||||||||||| | ||||| || || || || Sbjct 5633 ACAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAA 5574 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTT 23822 || || || ||||| || || |||||||| || Sbjct 5573 TATCCAGAAGGAGTCTACTTTGCATTTAGTCTT 5541 Score = 95.1 bits (104), Expect = 8e-15 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || || || || || || || ||||| ||||| || |||||||| || | Sbjct 5981 AATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACACTGGAAGTTGAGCCCTC 5922 Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| | |||| | |||| | |||| || || || ||||| | || ||||| | Sbjct 5921 TGACACAATCGAAAATGTTAAGGCCAAAA-TTCAAGATAAGGAAGGAATTCCTCCAGACC 5863 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 |||| | | || ||||| || || || || ||||| | |||||| | || |||| Sbjct 5862 AACAAAGGCTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTGTCTGACTACA 5803 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGT 23819 | || || || || || || ||||||||||| Sbjct 5802 ATATTCAGAAGGAATCTACTTTACATTTAGT 5772 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| |||||||| || || || || || ||||| |||||| | ||||| || | | Sbjct 4841 AATGCAAATTTTCGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTC 4782 Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || || | |||| | |||| | |||| || ||||| |||||| | || ||||||| Sbjct 4781 TGATACAATAGAAAATGTTAAGGCTAAAA-TTCAAGACAAGGAAGGTATTCCTCCAGATC 4723 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 |||| | | || ||||| || || ||||||||||| | || || || || || | Sbjct 4722 AACAAAGACTGATTTTTGCTGGAAAGCAACTGGAAGATGGGCGTACATTGTCAGACTATA 4663 Query 23789 ACATACAAAAAGAGTCCAC 23807 | || || ||||| || || Sbjct 4662 ATATCCAGAAAGAATCTAC 4644 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || || ||||| || || || ||||| ||||| | ||||| || | | Sbjct 6209 AATGCAAATATTTGTAAAAACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTC 6150 Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || || |||||| | |||| | |||| | || ||||| || | || ||||||| Sbjct 6149 TGATACAATTGAAAATGTTAAGGCGAAAA-TCCAGGATAAAGAGGGCATTCCCCCAGATC 6091 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 |||| | | || ||||| || || || || ||||| | ||||||| || || |||| Sbjct 6090 AACAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACTCTATCTGACTACA 6031 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 | || || || || || || || ||| | || || || || |||| ||| Sbjct 6030 ATATTCAGAAGGAATCTACTTTGCATCTGGTACTACGGCTGAGAGGTGGA 5981 >seq133270 Length=334 Score = 116 bits (128), Expect = 2e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| ||||||||||| || ||||| || || || || ||||| || || | Sbjct 183 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACCCTGGAAGTGGAACCCTCT 124 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || ||| |||||| ||||| |||||| |||||||| || | || || ||||| Sbjct 123 GATACTATTGAAAATGTAAAAGCTAAAATTCAAGACAAAGAGGGCATCCCTCCTGATCAG 64 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || |||||||| || ||| ||||||| | ||||| | || |||||| Sbjct 63 CAGCGTCTTATCTTTGCCGGTAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAAC 4 Query 23791 AT 23792 || Sbjct 3 AT 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337375367131172