Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq58137 131 1e-25
seq52194 129 4e-25
seq9095 123 2e-23
seq133270 116 2e-21
>seq58137
Length=8097
Score = 131 bits (144), Expect = 1e-25
Identities = 149/200 (75%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||| || || ||||| || ||||| ||||| || ||| | |||||||| |
Sbjct 7530 AAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCT 7589
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| || ||| |||||| ||||| |||||| ||||| ||||| | || ||||||
Sbjct 7590 TCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 7649
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
||||| ||||| || || || || || ||| ||||||||| |||||| | || |||
Sbjct 7650 CAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACCCTTTCTGACTAC 7709
Query 23788 AACATACAAAAAGAGTCCAC 23807
|| || |||||||| || ||
Sbjct 7710 AATATTCAAAAAGAATCTAC 7729
>seq52194
Length=4646
Score = 129 bits (142), Expect = 4e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || || ||||| || ||||| ||||| | |||||||| || |
Sbjct 3888 ATGCAGATCTTTGTAAAGACACTCACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 3829
Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| |||||| | ||||| | || | | |||||||| || | || ||||||||
Sbjct 3828 GACACTATTGAAAATGTTAAAGCCAAGA-TCCAAGACAAAGAGGGAATTCCCCCAGATCA 3770
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| ||| | || || || ||||| || ||||| || | || ||| | || |||||
Sbjct 3769 ACAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGTCGTACTCTCTCTGACTACAA 3710
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|| || ||||||||||| || || || || ||| | || ||||||||
Sbjct 3709 TATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTTTACGAGGAGG 3662
Score = 125 bits (138), Expect = 5e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || || || || || || || || || || || ||||| ||||| || | |
Sbjct 4577 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAAGTAGAGCCGTCT 4518
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||||| |||| || ||| || ||||| ||| | || |||||||||
Sbjct 4517 GACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCAA 4458
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| ||| | || |||||||||||||| |||||||| | ||| || ||| || ||||||
Sbjct 4457 CAACGTCTTATCTTTGCCGGCAAACAGCTGGAAGATGGACGTACCTTATCGGACTACAAC 4398
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|| ||||| ||||| || | |||||||| | | ||||||| ||
Sbjct 4397 ATCCAAAAGGAGTCTACCCTTCATTTAGTACTGCGTCTGCGAGGTGG 4351
Score = 104 bits (114), Expect = 2e-17
Identities = 144/199 (72%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| || || || ||||| || || |||||||| || ||| | ||||| || | |
Sbjct 4117 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTAGAGCCATC 4058
Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
||||| |||||| | ||||| | || | || || || ||||| | || |||||||
Sbjct 4057 CGACACCATTGAAAATGTTAAAGCTAAGA-TTCAAGATAAGGAAGGAATTCCTCCAGATC 3999
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
|||| ||| | || || || || || ||||||||||| | ||||| | || ||||
Sbjct 3998 AACAACGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGCCGCACCCTGTCTGACTACA 3939
Query 23789 ACATACAAAAAGAGTCCAC 23807
| || || |||||||||||
Sbjct 3938 ATATCCAGAAAGAGTCCAC 3920
>seq9095
Length=14658
Score = 123 bits (136), Expect = 2e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| ||||| || ||||| || || || ||||| || ||||| |||||||| | |
Sbjct 5296 ATGCAAATTTTTGTAAAAACGCTTACTGGTAAAACTATTACTCTTGAAGTTGAGCCTTCT 5237
Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||||| | ||||| |||||| || || || || || | || ||||| ||
Sbjct 5236 GACACAATTGAAAATGTTAAAGCAAAAA-TTCAAGATAAGGAGGGGATTCCCCCAGACCA 5178
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||| | | || || || || |||||||| ||||| | |||||| || || |||||
Sbjct 5177 ACAGAGGCTTATTTTCGCTGGAAAACAACTTGAAGATGGACGCACACTATCAGACTACAA 5118
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819
||| || || || || || |||||||||||
Sbjct 5117 CATTCAGAAGGAATCTACTTTACATTTAGT 5088
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| |||||||| || || || || || || || |||||| | |||||||| | |
Sbjct 6437 AATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTAGAAGTTGAGCCTTC 6378
Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
|| || |||||| | ||||| | |||| || || ||||| || | || |||||||
Sbjct 6377 TGATACAATTGAAAATGTTAAAGCGAAAA-TTCAGGATAAAGAGGGAATTCCCCCAGATC 6319
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
| || | | || ||||| || || || || ||||| | |||||| || |||||||
Sbjct 6318 AGCAAAGACTTATTTTTGCTGGAAAGCAGCTAGAAGATGGACGCACACTATCTGATTACA 6259
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
|||| || ||||| || || || || |||| || || || |||| |||
Sbjct 6258 ACATTCAGAAAGAATCTACTTTGCACCTAGTACTACGGCTGAGAGGTGGA 6209
Score = 102 bits (112), Expect = 5e-17
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| ||||| || ||||| || || || ||||| || || | ||||| || | |
Sbjct 5068 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 5009
Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | |||| | ||||| |||| | || ||||||||||| | || || |||||
Sbjct 5008 GACACAATCGAAAATGTTAAAGCAAAGA-TTCAGGACAAAGAAGGCATTCCTCCTGATCA 4950
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || ||||| || || ||||||||||| | ||||| || || || ||
Sbjct 4949 ACAAAGACTGATTTTTGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAA 4890
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTT 23822
|| || || ||||| || || |||||||| ||
Sbjct 4889 TATCCAGAAGGAGTCTACTTTGCATTTAGTGTT 4857
Score = 98.7 bits (108), Expect = 7e-16
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| ||||| || ||||| || || || ||||| || || | ||||| || | |
Sbjct 5752 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 5693
Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | |||| | ||||| |||| | || ||||||||||| | || || |||||
Sbjct 5692 GACACAATCGAAAATGTTAAAGCAAAGA-TTCAGGACAAAGAAGGCATTCCTCCTGATCA 5634
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || || || || || ||||||||||| | ||||| || || || ||
Sbjct 5633 ACAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAA 5574
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTT 23822
|| || || ||||| || || |||||||| ||
Sbjct 5573 TATCCAGAAGGAGTCTACTTTGCATTTAGTCTT 5541
Score = 95.1 bits (104), Expect = 8e-15
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| || || || || || || || || ||||| ||||| || |||||||| || |
Sbjct 5981 AATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACACTGGAAGTTGAGCCCTC 5922
Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
||||| | |||| | |||| | |||| || || || ||||| | || ||||| |
Sbjct 5921 TGACACAATCGAAAATGTTAAGGCCAAAA-TTCAAGATAAGGAAGGAATTCCTCCAGACC 5863
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
|||| | | || ||||| || || || || ||||| | |||||| | || ||||
Sbjct 5862 AACAAAGGCTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTGTCTGACTACA 5803
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGT 23819
| || || || || || || |||||||||||
Sbjct 5802 ATATTCAGAAGGAATCTACTTTACATTTAGT 5772
Score = 91.5 bits (100), Expect = 1e-13
Identities = 141/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| |||||||| || || || || || ||||| |||||| | ||||| || | |
Sbjct 4841 AATGCAAATTTTCGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTC 4782
Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
|| || | |||| | |||| | |||| || ||||| |||||| | || |||||||
Sbjct 4781 TGATACAATAGAAAATGTTAAGGCTAAAA-TTCAAGACAAGGAAGGTATTCCTCCAGATC 4723
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
|||| | | || ||||| || || ||||||||||| | || || || || || |
Sbjct 4722 AACAAAGACTGATTTTTGCTGGAAAGCAACTGGAAGATGGGCGTACATTGTCAGACTATA 4663
Query 23789 ACATACAAAAAGAGTCCAC 23807
| || || ||||| || ||
Sbjct 4662 ATATCCAGAAAGAATCTAC 4644
Score = 87.8 bits (96), Expect = 1e-12
Identities = 159/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| || || || ||||| || || || ||||| ||||| | ||||| || | |
Sbjct 6209 AATGCAAATATTTGTAAAAACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTC 6150
Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
|| || |||||| | |||| | |||| | || ||||| || | || |||||||
Sbjct 6149 TGATACAATTGAAAATGTTAAGGCGAAAA-TCCAGGATAAAGAGGGCATTCCCCCAGATC 6091
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
|||| | | || ||||| || || || || ||||| | ||||||| || || ||||
Sbjct 6090 AACAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACTCTATCTGACTACA 6031
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
| || || || || || || || ||| | || || || || |||| |||
Sbjct 6030 ATATTCAGAAGGAATCTACTTTGCATCTGGTACTACGGCTGAGAGGTGGA 5981
>seq133270
Length=334
Score = 116 bits (128), Expect = 2e-21
Identities = 135/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| ||||||||||| || ||||| || || || || ||||| || || |
Sbjct 183 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACCCTGGAAGTGGAACCCTCT 124
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| ||| |||||| ||||| |||||| |||||||| || | || || |||||
Sbjct 123 GATACTATTGAAAATGTAAAAGCTAAAATTCAAGACAAAGAGGGCATCCCTCCTGATCAG 64
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || |||||||| || ||| ||||||| | ||||| | || ||||||
Sbjct 63 CAGCGTCTTATCTTTGCCGGTAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAAC 4
Query 23791 AT 23792
||
Sbjct 3 AT 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337375367131172
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |