Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq9095 172 1e-37 seq21475 138 3e-27 seq52194 136 9e-27 seq58137 122 2e-22 seq23 122 2e-22 seq133270 98.7 2e-15 seq92866 86.0 1e-11 >seq9095 Length=14658 Score = 172 bits (190), Expect = 1e-37 Identities = 170/220 (77%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 |||||| || |||||||| ||||| |||||||| |||| ||| || || | ||| || | Sbjct 4622 AAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGGATATTATAGTCTGACAATGTACG 4681 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 ||||||||| || ||||| ||||| || || |||| |||||| || || ||||||||||| Sbjct 4682 CCCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCTGGAGGAATACCTTC 4741 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 ||||||||| || || ||| ||| ||| || || || || | |||||| || || || Sbjct 4742 CTTGTCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGT 4801 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||| || || || |||| || |||| ||| | ||||||| Sbjct 4802 GATAGTTTTCCCAGTCAGTGTCTTTACGAAAATTTGCATT 4841 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| | ||| || || || |||| ||| || || | ||| || | ||||||||| || || Sbjct 6461 GTGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCGAGTTG 6520 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| || ||||| || |||| |||||| || || ||||| |||||||||||||| ||||| Sbjct 6521 CTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTT 6580 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 | ||| || |||||| || || || | |||||| || || ||||| || || || || Sbjct 6581 TGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGT 6640 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 |||||||||| ||| | |||||| Sbjct 6641 TAAAGTTTTTACGAAGATTTGCAT 6664 Score = 143 bits (158), Expect = 6e-29 Identities = 160/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||| || | ||| | ||| ||||| ||||| | ||| || || | || ||| | ||||| Sbjct 5312 CAGAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAGTCAGACAGAGTGCGTCCATC 5371 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||||||||| || |||||||| || || | |||||||| || ||||||||||||||||| Sbjct 5372 TTCTAGCTGTTTGCCAGCGAAAATCAGCCTCTGTTGGTCTGGAGGAATACCTTCCTTGTC 5431 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||| || || ||| ||| ||| || || || || | |||||| || || ||||| || Sbjct 5432 TTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGT 5491 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || |||| || |||| || | ||||||| Sbjct 5492 TTTCCCAGTCAGTGTCTTTACAAAAATTTGCATT 5525 Score = 131 bits (144), Expect = 4e-25 Identities = 159/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| | ||| |||||||| || | |||||||| | | || | |||||| Sbjct 6225 AGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGATAGTGTGCGTCCATCT 6284 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 ||||||||||| ||||| || ||||||| ||| || || || ||||| || || || || Sbjct 6285 TCTAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTATCC 6344 Query 225622 TGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 || || ||| || || ||| ||| || || || || | || || ||||| ||||| || Sbjct 6345 TGAAT-TTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACTTCTAAAGTGATAGT 6403 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 |||||| |||| || |||| ||| | ||||||| Sbjct 6404 CTTGCCAGTCAGTGTCTTTACGAAAATTTGCATT 6437 >seq21475 Length=13715 Score = 138 bits (152), Expect = 3e-27 Identities = 166/223 (74%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||||| || ||||| || | |||||||| ||||| | ||||| || | ||| || Sbjct 11116 CGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTA 11057 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||||||||| || || ||||| ||||| | ||||| ||||| || ||||||||| Sbjct 11056 CGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCT 10997 Query 225613 TCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| |||||||| ||| || || ||| ||| || || || |||| ||||| || | Sbjct 10996 TCCTTATCTTGGAT-TTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCCACCTCGAG 10938 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || || || ||||| | || || | ||| | ||||||| Sbjct 10937 GGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 10895 >seq52194 Length=4646 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || ||||| ||||| |||| |||||| || | || || | |||||| Sbjct 3905 AGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCT 3964 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| |||||||||||||| |||||||| || || ||||| |||||||| ||| Sbjct 3965 TCCAGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCT 4024 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| || ||| ||| |||||||| || | || || || || || || || Sbjct 4025 TGAATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGCTCTACTTCCAAAGTTATTGTT 4084 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || || | ||||| | || | ||||||| Sbjct 4085 TTTCCAGTAAGTGTTTTGACAAATATTTGCATT 4117 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || ||||||||||||| || ||||| | || ||| | ||||| || | ||| || ||| Sbjct 3464 GTAGATTCTTTTTGGATGTTATAATCCGACAGAGTGCGGCCATCCTCCAACTGTTTACCA 3523 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 || ||||| || || |||||||| || ||||| || ||||||||||||||||| ||| Sbjct 3524 GCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTA 3583 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 ||| |||||| ||||| || | || || || || ||||| ||||| || || | ||| Sbjct 3584 ACATTTTCGATAGTGTCGGATGGCTCAACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTC 3643 Query 225697 TTTATGAACACTTGCAT 225713 || | ||| | ||||| Sbjct 3644 TTAACGAAGATCTGCAT 3660 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| | |||||| ||||| || | |||||| || | | ||| | ||||| || ||||| Sbjct 3685 GTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGACCATCCTCCAGCTG 3744 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| |||||||| || || |||||||| || || ||||| || || |||||||||||||| Sbjct 3745 CTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATTCCCTCTTTGTCTTGGATCTT 3804 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 || ||| ||| || |||||||||| ||| || ||||| ||||| || || || || Sbjct 3805 GGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTTCCCTGT 3864 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 | || |||| || | ||||| Sbjct 3865 GAGTGTCTTTACAAAGATCTGCAT 3888 >seq58137 Length=8097 Score = 122 bits (134), Expect = 2e-22 Identities = 164/226 (73%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| ||||| ||||||||||| | |||||| || | | || Sbjct 7754 ACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGGGT 7695 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| | ||||| |||||||| || | |||||||| || || ||||| || Sbjct 7694 GCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCC 7635 Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 |||||||||||| || ||| || || ||| ||| || || || || | ||| || || | Sbjct 7634 TTCCTTGTCTTGAAT-TTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCA 7576 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 | || || || || ||||| | ||||| | || | |||||||| Sbjct 7575 AAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 7530 >seq23 Length=15353 Score = 122 bits (134), Expect = 2e-22 Identities = 135/180 (75%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| |||| || |||| |||| || ||||| ||| |||| ||||| ||| | |||||| Sbjct 11344 CAAATTTATAATACTATTGTTACAGCTCATGCTTTTATTATAATTTTTTTTATAGTTATG 11403 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || |||| || || || || ||||||||||| || || ||||| | || ||||||||| Sbjct 11404 CCAATTATAATTGGAGGATTTGGAAATTGATTAGTACCATTAATATTAGGAGCTCCTGAT 11463 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 || |||||||| | | || || ||||| |||||| | |||| || || ||| || || Sbjct 11464 ATAGCTTTTCCTCGAATAAATAACATAAGATTTTGACTTTTACCCCCATCATTAATTTTA 11523 Score = 118 bits (130), Expect = 3e-21 Identities = 88/103 (85%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727 ||| ||||||||||||||||||||| |||||||||||||| | |||||||| ||||| | Sbjct 11920 ATACTTCAGGATGACCAAAAAATCAAAATAAATGTTGATATAAAATAGGATCACCTCCTC 11861 Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 ||| ||| |||||||| ||||| ||||||| ||||||||| Sbjct 11860 CTGCTGGGTCAAAAAAAGATGTATTTAAATTTCGATCAGTTAA 11818 >seq133270 Length=334 Score = 98.7 bits (108), Expect = 2e-15 Identities = 103/134 (77%), Gaps = 1/134 (1%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| | ||| ||||||||||||| ||||| || | | || | |||||| Sbjct 200 AGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGATAGTGTACGACCATCT 259 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 |||| ||||| || || || ||||| |||||||| || || ||||| ||||| |||||| Sbjct 260 TCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTCT 319 Query 225622 TGGATCTTTTGCTT 225635 ||||| ||| |||| Sbjct 320 TGGAT-TTTAGCTT 332 >seq92866 Length=653 Score = 86.0 bits (94), Expect = 1e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 371365 AATGGTAATTTATGCATAGATAAACCAGGTACTCTCATATTAAATATCGTAGTAATAAAG 371424 |||| ||||||||| | || ||| ||| |||||||||| ||||| || || |||||| Sbjct 141 AATGCTAATTTATGTAATCTTATACCTGGTGCTCTCATATTTAATATTGTTGTTATAAAG 200 Query 371425 TTTATAGCGCCTAGAAGAGAAGATATACCTGCAAGATGTAAACTAAATATTGCTAAATCG 371484 || || || || || | | | |||||||| | ||||||| |||||||||||||| Sbjct 201 TTCATGGCTCCAAGTAAACTACTTATACCTGATAAATGTAAAGCGAATATTGCTAAATCA 260 Query 371485 AC 371486 || Sbjct 261 AC 262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1190178813327546