Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq89413 109 4e-19 seq133270 86.0 5e-12 >seq89413 Length=986 Score = 109 bits (120), Expect = 4e-19 Identities = 180/260 (69%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 109141 GCGTACTTTGTCGAATGGGGTGTGTACGGCCGCAATTTTCCCGTGGACAAAGTGCCGTTG 109200 || ||||| || ||||||||||| || | || || ||||| || | || | Sbjct 727 GCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTAGATCGTATACCTATA 786 Query 109201 CCCAATTTATCGCATTTGCTGTACGGTTTTATTCCAATATGTGGCGGCGACGGCATCAAC 109260 || ||| | | || ||||| ||||| ||||||||||| || ||||| ||||||||||| Sbjct 787 CCTAATCTTACTCACTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAAT 846 Query 109261 GACGCCCTCAAAACCATTCCCGGCAGTTTTGACGCTTTGCAACGATCGTGCCGCGGTCGC 109320 || | ||| || |||||||| | || | || || || || |||| || Sbjct 847 GATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCCTGTAGCGGCCGT 906 Query 109321 GACGATTTCAAAGTGTCCATACACGACATTTGGGCCGCGGTGCAAAAACCGCAAAAAGGC 109380 || || |||||||| || || ||||| ||||| || | |||||||| |||||||| Sbjct 907 GAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGA 966 Query 109381 GTGACCGCGTGGAACGAGCC 109400 || | | ||||||||||| Sbjct 967 TTGTCTTCATGGAACGAGCC 986 >seq133270 Length=334 Score = 86.0 bits (94), Expect = 5e-12 Identities = 88/113 (78%), Gaps = 4/113 (4%) Strand=Plus/Plus Query 101035 GTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGA--ATCTTCCAAT 101092 ||||||||| ||||||||||| || ||||| || | ||||| | || |||||| ||| Sbjct 208 GTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAG--ATAGTGTACGACCATCTTCTAAT 265 Query 101093 TGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 || ||||||||| | ||||| | |||||| || || | |||||||||||| Sbjct 266 TGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTC 318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408892122588381