Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq4562 592 2e-164
seq7375 100 4e-16
seq7176 95.1 2e-14
>seq4562
Length=21325
Score = 592 bits (656), Expect = 2e-164
Identities = 1037/1497 (69%), Gaps = 17/1497 (1%)
Strand=Plus/Minus
Query 76762 TTATTTTATTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGAT 76821
|||||||| || || | ||||||||||| | | | ||| |||||||| |||| |
Sbjct 21100 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 21041
Query 76822 AGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGG 76881
||||||| || ||||||| ||||| |||| ||| |||||| || || |||||
Sbjct 21040 AGTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 20981
Query 76882 AATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTC 76941
||| |||| | || | ||| || || | || |||||||| || || ||||||||||
Sbjct 20980 CATAGTTAGGTTTAGCAACATGGATGTTGAAAGATTGACTTTGGTCTATAAAAGCTCCTC 20921
Query 76942 TATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTT 77001
||||||| ||||| | ||| || || | | ||| ||||| | |||||| | | |
Sbjct 20920 TATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAAT 20861
Query 77002 GTTTGATATCATCTGGAAGGTTTGTATTTT---GAATGGAACCACCATCTGATATAATTG 77058
| | || || | |||| ||| | ||| | || || ||| | |||||||
Sbjct 20860 CTCTTATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAA 20801
Query 77059 TATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGAT 77118
|| || ||||| |||| |||||| | | || ||| | | || |||||| | |
Sbjct 20800 GGTTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGGT 20741
Query 77119 TAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTT 77178
| |||| ||||||||||||| || ||||| | ||||||||| ||| | ||||
Sbjct 20740 TCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTT 20681
Query 77179 CCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCA 77238
| | ||||||| |||| || | |||||| |||||||| ||||| |||||||| || | ||
Sbjct 20680 CAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATCA 20621
Query 77239 ATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAA 77298
||| | ||| | | ||||||| || || || ||||| || ||| |||||||
Sbjct 20620 ATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCAAA 20561
Query 77299 GATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATC 77358
| |||| ||| ||||| | ||| || || || || || | || || | ||
Sbjct 20560 GGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGC-TGGACTC 20502
Query 77359 CATT-ATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCT 77417
| || |||||| || | |||||| ||||||||| ||||||||| ||||| | |||
Sbjct 20501 CCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAGTGCA 20442
Query 77418 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAAC 77477
|| |||||||| ||||| || || | | ||||||| | ||||| ||| || |
Sbjct 20441 CCATAATAAATAGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAA 20382
Query 77478 GGATAATGTAAAAGA-ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCT 77536
| ||| | | | | | ||| |||||||| | |||||||| |||||||||||||||||
Sbjct 20381 G-ATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCT 20323
Query 77537 ATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTT 77596
||||||| |||| ||| |||| ||||| || | ||||||| |||||| || |||| |||
Sbjct 20322 ATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACTTT 20263
Query 77597 ATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCC 77656
|| | |||| | || | || | || |||| ||| ||||| ||||||
Sbjct 20262 GTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTGTT 20203
Query 77657 ATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGC 77716
|| | |||||||||||| | ||||| || || || || || ||||| || |||| |
Sbjct 20202 ATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTC 20143
Query 77717 GTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTG 77776
| ||||| | | ||| || || ||||| |||||||| |||||||| |||||||
Sbjct 20142 TGAAGTGTATTGCACAACCTCTGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTT 20083
Query 77777 TTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAAT 77836
||| || |||||| | || || | |||||||| | || | || || || || || |
Sbjct 20082 TTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCAC 20023
Query 77837 CTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATCATAGATTTGTA--TC 77892
|| | ||| ||||| || ||||| | ||||| |||| | | | | ||| || ||
Sbjct 20022 TTGGGCTTCTATAATTGACTTCCATA--ACTCTTGAGCTCTGAC--TTGTTTTATAAATC 19967
Query 77893 GCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACA-TCATCC 77951
| | ||| |||||||| ||||||| ||||||||| ||||| || || ||| |
Sbjct 19966 GTTTTTCTTCTTCATATTTGGTATATAATTCTTCAAATTCCTCTCCA-AAGCAGTCAGCG 19908
Query 77952 AATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTC 78011
| ||||| | |||| || ||||| | ||| | |||||| | |||| ||||
Sbjct 19907 AGGCCAGGACTGTCATGAGGACACATGAGACTCCAAACTTCATCTTTTTCTACTCTTTTC 19848
Query 78012 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTT 78071
||||| ||||| |||||||||| |||| ||| || |||| | ||| |||||| ||
Sbjct 19847 ATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTA 19788
Query 78072 CCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 78131
||||| ||||| || | ||| | || || | || || | |||||| || |||| |||
Sbjct 19787 CCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCCGCATGCCAAGGCTCTAAATAA 19728
Query 78132 ATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTA 78191
||||| | | || || ||||| || || || ||||||| ||||||||| || || |||
Sbjct 19727 ATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTA 19668
Query 78192 TAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAA 78248
|| |||||||||||||| | | ||| || || ||||| || |||| || |||
Sbjct 19667 TACACTCTCAACATTGGCACTAGACCATTCGAGACCCCATTAGTGCCAGCTATGTAA 19611
Score = 114 bits (126), Expect = 2e-20
Identities = 92/111 (83%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 78542 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 78601
|||||| ||||| |||||||| |||||| ||||||||||||| |||||||||||||||||
Sbjct 18970 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTA 18911
Query 78602 TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTT 78652
| ||| ||||| || |||| ||| |||| | || ||| || |||| |||
Sbjct 18910 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 18860
>seq7375
Length=9560
Score = 100 bits (110), Expect = 4e-16
Identities = 79/95 (83%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 48627 TTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTC 48686
|| |||| ||||||||||| || |||||||| ||||| || |||||||||||||| | |
Sbjct 3667 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 3608
Query 48687 CATATATCACTGTATTGGATTGGGAAAATAACAAA 48721
|||||||| |||||||||||||| ||||| ||
Sbjct 3607 CATATATCTGGATATTGGATTGGGAATATAACGAA 3573
Score = 87.8 bits (96), Expect = 2e-12
Identities = 154/220 (70%), Gaps = 7/220 (3%)
Strand=Plus/Minus
Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224
||||| ||| ||| | ||| || || || | |||||||| || || ||||||||
Sbjct 4857 TCATCCCTAGAAATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTC 4798
Query 48225 AGCCAAAATATTGCCGCGAAAGAT-CCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283
| ||||||||||| || |||| | || || || ||||| || || || || ||||| ||
Sbjct 4797 AACCAAAATATTGAAGC-AAAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAAAGC 4739
Query 48284 GGTAAGTCTCTCTCC----GTAACTGGCTTCGTTGTGTATCCACCGTTGTGCCCAATCAG 48339
| | | ||||| ||| | | ||| | || |||||| || ||||| || |
Sbjct 4738 AATTATACGTTCTCCAAATGTAGCCGTCTT-GCTGCCGATCCACTGTAACGCCCAGTCTG 4680
Query 48340 CCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 48379
|||||||||| ||||| || | ||||| || ||||| ||
Sbjct 4679 CCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGAA 4640
>seq7176
Length=6331
Score = 95.1 bits (104), Expect = 2e-14
Identities = 244/370 (66%), Gaps = 9/370 (2%)
Strand=Plus/Plus
Query 170967 TTATGATTCCTATAAATCCTATGTTAGCAGAATCATGTGATTCTGTTAACAAGGCATTTA 171026
|||||| ||| || || |||||||| ||| | || | || ||| | | ||| | |
Sbjct 2579 TTATGACTCCAGTATTACCGATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTATGA 2638
Query 171027 AAAAATTTCCATCTGGAATGTTTGCAGAAGTAAAATATGATGGTGAACGAGTCCAAGTTC 171086
|||||| |||| ||| |||||| | || ||||||||||||| ||||| || ||||| |
Sbjct 2639 AAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGTCC 2698
Query 171087 ATAAAAACAATAATAATTTTGCCTTCTTTAGCAGAAACATGAAACCAGTTTTACCACATA 171146
||||||| ||| | || | ||| | | | | |||||||| | | || |
Sbjct 2699 ATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCAGTAATGGCTCACA 2758
Query 171147 AAGTTGATTATCTCAAGGAATACCTTCCTAAAGCATT---TAAAAAAGCTACCTCTATTA 171203
||||| | || | || || || | || |||||||| |||| || | || | |
Sbjct 2759 AAGTTAGTCATTTTAAAGATTATTTGCCCAAAGCATTTCCTAAAGGAGATGACT---TGA 2815
Query 171204 TCTTGGATTCCGAAATTGTTCTAGTTGATGAACATAATG---TTCCACTTCCGTTTGGAA 171260
|||||||| | ||| | || | ||||||| ||| || ||| | || || || |
Sbjct 2816 TCTTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCATTGCCTTTCGGTA 2875
Query 171261 GTCTAGGAATACACAAAAAGAAAGAGTACAAAAATGCTAATATGTGTTTGTTCGTCTTTG 171320
|||| || |||||| | ||| | ||| ||||| | | || || | | ||||
Sbjct 2876 CATTAGGTATTCACAAACAATCAGAATTTAAAGATGCTCAAGTTTGCTTATATATATTTG 2935
Query 171321 ATTGTTTATA 171330
|||| |||||
Sbjct 2936 ATTGCTTATA 2945
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 693331918577760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |