Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq4562 589 3e-163
seq7375 91.5 2e-13
>seq4562
Length=21325
Score = 589 bits (652), Expect = 3e-163
Identities = 1116/1627 (69%), Gaps = 19/1627 (1%)
Strand=Plus/Minus
Query 75357 TTATTTTATTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGAT 75416
|||||||| || || | || |||||||| | | | |||||||||||| |||| |
Sbjct 21100 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 21041
Query 75417 AGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGG 75476
||||||| || ||||||| ||||| |||| ||| |||||| || || |||||
Sbjct 21040 AGTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 20981
Query 75477 AATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTC 75536
||| | || | || | ||| || || | || |||||||| || || ||||||||||
Sbjct 20980 CATAGTTAGGTTTAGCAACATGGATGTTGAAAGATTGACTTTGGTCTATAAAAGCTCCTC 20921
Query 75537 TATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTT 75596
||||||| ||||| | ||| || || | | ||| ||||| | |||||| | | |
Sbjct 20920 TATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAAT 20861
Query 75597 GTTTGATATCATCTGGAAGATTTGTATTTT---GAATGGATCCGCCATCAGATATAATTG 75653
| | || || | |||| ||| | ||| | || ||||| | |||||||
Sbjct 20860 CTCTTATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAA 20801
Query 75654 TATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGAT 75713
|| || || || |||| |||||| | | || ||| | | || |||||| | |
Sbjct 20800 GGTTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGGT 20741
Query 75714 TAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTT 75773
| || | ||||||||||||| || ||||||| ||||||||| ||| | ||||
Sbjct 20740 TCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTT 20681
Query 75774 CCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCA 75833
| | ||||||| |||| || | |||||| ||||| || |||||||||||||| || | ||
Sbjct 20680 CAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATCA 20621
Query 75834 ATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAA 75893
||| | ||| | | ||||||| || || || ||||| || ||| |||||||
Sbjct 20620 ATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCAAA 20561
Query 75894 GATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATC 75953
| |||| || ||||| | ||| || || || || || | ||| || | ||
Sbjct 20560 GGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGC-TGGACTC 20502
Query 75954 CATT-ATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCA 76012
| || |||||| ||| | || || |||||||||| ||| ||||| || |||| |||
Sbjct 20501 CCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAGTGCA 20442
Query 76013 CCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAA 76072
|| |||||||| ||||| || || | | ||| ||| | |||| ||| || ||
Sbjct 20441 CCATAATAAATAGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAA 20382
Query 76073 GGATAATGTAAAAGA-ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCT 76131
| ||| | | | | | ||| |||||||| | |||||||| |||||||||||||||||
Sbjct 20381 G-ATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCT 20323
Query 76132 ATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTT 76191
||||||| |||| ||| ||| ||||| || | ||| ||| |||||| ||| |||| |||
Sbjct 20322 ATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACTTT 20263
Query 76192 ATTGAGATTTCTGACA-ACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTC 76250
|| | |||| ||| || | || | || |||| ||| ||||| |||| |
Sbjct 20262 GTTTAAATTT-TGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTGT 20204
Query 76251 CATCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAG 76310
|| | |||||||| ||||| ||||| || || || || || || || || ||||
Sbjct 20203 TATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTT 20144
Query 76311 CATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTT 76370
| | ||||| | | ||| ||||| ||||| ||||| || ||||| ||||||||||
Sbjct 20143 CTGAAGTGTATTGCACAACCTCTGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTT 20084
Query 76371 GTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAA 76430
||| || |||||| ||||||| | |||||||| | | | || || ||||| || |
Sbjct 20083 TTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCA 20024
Query 76431 TCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATTATAGATTTGTA--T 76486
|| | ||| ||||| || ||||| | ||||| |||| | | | | ||| || |
Sbjct 20023 CTTGGGCTTCTATAATTGACTTCCATA--ACTCTTGAGCTCTGACTT--GTTTTATAAAT 19968
Query 76487 CGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACA-TCATC 76545
|| || ||| |||||||| |||||||| ||||||||| ||||| || || ||| |
Sbjct 19967 CGTTTTTCTTCTTCATATTTGGTATATAATTCTTCAAATTCCTCTCCA-AAGCAGTCAGC 19909
Query 76546 CAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTT 76605
| ||||||| |||| |||||||| | ||| | |||||| | || | |||
Sbjct 19908 GAGGCCAGGACTGTCATGAGGACACATGAGACTCCAAACTTCATCTTTTTCTACTCTTTT 19849
Query 76606 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATT 76665
|||||| ||||| |||||||||| |||| ||| || |||| | ||| |||||| ||
Sbjct 19848 CATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTT 19789
Query 76666 TCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATA 76725
||||| ||||| || | ||| | ||| || | || || | |||||| || |||| |||
Sbjct 19788 ACCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCCGCATGCCAAGGCTCTAAATA 19729
Query 76726 TATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATT 76785
|| || | | || || ||||| || || || ||||||| |||||||||||| || ||
Sbjct 19728 AATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTT 19669
Query 76786 ATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACT 76845
||| |||||||||||||| | | || || || ||||| || |||| || |||
Sbjct 19668 ATACACTCTCAACATTGGCACTAGACCATTCGAGACCCCATTAGTGCCAGCTATGTAAGA 19609
Query 76846 TCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAG 76905
|| || | || | || || ||||| || || || |||||| ||||
Sbjct 19608 ACCCTGAGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATTAA 19549
Query 76906 AGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAG 76965
||||| |||| || || ||| | || || || || ||||| || |||| | |||
Sbjct 19548 TGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCATAGCTATAAG 19489
Query 76966 AAAACAG 76972
||||||
Sbjct 19488 GAAACAG 19482
Score = 114 bits (126), Expect = 2e-20
Identities = 92/111 (83%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 77137 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 77196
|||||| ||||| |||||||| |||||| ||||||||||||| |||||||||||||||||
Sbjct 18970 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTA 18911
Query 77197 TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTT 77247
| ||| ||||| || |||| ||| | || | || ||||||||| | |||
Sbjct 18910 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 18860
>seq7375
Length=9560
Score = 91.5 bits (100), Expect = 2e-13
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 47116 TTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTC 47175
|| |||| ||||||||||| || ||||| || || || || |||||||||||||| | |
Sbjct 3667 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 3608
Query 47176 CATATATCACGATATTGGATCGGAAAAATAACAAA 47210
|||||||| |||||||||| || || ||||| ||
Sbjct 3607 CATATATCTGGATATTGGATTGGGAATATAACGAA 3573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 711562366658880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |