Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq9095 131 4e-25
seq52194 122 2e-22
seq21475 111 4e-19
seq58137 100 7e-16
>seq9095
Length=14658
Score = 131 bits (144), Expect = 4e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | ||| | |||||| || || || |||||||| || | || || | ||||||
Sbjct 5085 AGTACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGTCTGATAGTGTGCGTCCATCT 5144
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || ||| || ||||| ||||||||||| ||||| | | || || ||||| |||
Sbjct 5145 TCAAGTTGTTTTCCAGCGAAAATAAGCCTCTGTTGGTCTGGGGGAATCCCCTCCTTATCT 5204
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||||||| ||| ||| | || | |||| ||| ||| ||||||||||||||||||
Sbjct 5205 TGAATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTT 5264
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || || || || | |||||
Sbjct 5265 TTACCAGTAAGCGTTTTTACAAAAATTTGCAT 5296
Score = 125 bits (138), Expect = 2e-23
Identities = 170/234 (73%), Gaps = 5/234 (2%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| |||||||| ||||| ||||||||||| ||||| ||||| || || || | || ||
Sbjct 4620 CTAAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGGATATTATAGTCTGACAATGTA 4679
Query 151944 CTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001
| ||||||||| || ||||| || || || || || || || || || | | || |
Sbjct 4680 CGCCCATCTTCCAGTTGCTTT--CCAGCAAAAATCAGTCTTTGTTGATCTGGAGGAATAC 4737
Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAA 152061
||||||| ||||||||||| || ||| | |||| | || ||| || ||||| |
Sbjct 4738 CTTCCTTGTCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCA 4797
Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTA 152114
||| |||||||| || || || ||||| ||||| | |||||| ||| ||||
Sbjct 4798 AAGTGATAGTTTTCCCAGTCAGTGTCTTTACGAAAATTTGCATTCCACCTCTTA 4851
Score = 114 bits (126), Expect = 3e-20
Identities = 159/221 (72%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || || || | |||||| ||||| || ||||||||||| | || || | ||||||
Sbjct 6225 AGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGATAGTGTGCGTCCATCT 6284
Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
||||| ||||| || || || ||||| || ||||| || | | ||||| || || |
Sbjct 6285 TCTAGCTGCTTT--CCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTAT 6342
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070
| |||||||| ||| ||| | || | | || ||| ||| ||||| | ||| ||||
Sbjct 6343 CCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACTTCTAAAGTGATAG 6402
Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACCC 152111
| ||||| || || ||||| ||||| | |||||| ||||
Sbjct 6403 TCTTGCCAGTCAGTGTCTTTACGAAAATTTGCATTCCACCC 6443
Score = 107 bits (118), Expect = 4e-18
Identities = 150/209 (72%), Gaps = 1/209 (0%)
Strand=Plus/Plus
Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCC 151966
|||||| || ||||| || || || || | | ||| | ||||||||||| ||| ||
Sbjct 5327 AGTAGATTCCTTTTGAATATTATAGTCAGACAGAGTGCGTCCATCTTCTAGCTGTTTGCC 5386
Query 151967 GGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTT 152026
||||| || |||||||| ||||| | | || |||||||| ||||||||||| ||
Sbjct 5387 AGCGAAAATCAGCCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTAGCCTT 5446
Query 152027 GACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGT 152086
||| | |||| | || ||| || ||||| | ||| |||||||| || || || ||
Sbjct 5447 AACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTTCCCAGTCAGTGT 5506
Query 152087 CTTCACGAAGACCTGCATTTTACC-CTTA 152114
||| || || | |||||| ||| ||||
Sbjct 5507 CTTTACAAAAATTTGCATTCCACCTCTTA 5535
Score = 104 bits (114), Expect = 5e-17
Identities = 153/215 (71%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | ||| | |||||| || || || || ||||| || | | || | ||||||
Sbjct 5769 AGTACTAAATGTAAAGTAGATTCCTTCTGAATATTGTAGTCAGACAGTGTGCGTCCATCT 5828
Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
|| || ||||| || || || |||||||| || ||||| | | ||||||||||| |
Sbjct 5829 TCAAGCTGCTTT--CCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATTCCTTCCTTAT 5886
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070
|||||||||| || ||| | || | |||| || ||| ||||| || || ||||
Sbjct 5887 CTTGAATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAG 5946
Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
||||||| || || ||||| || || | ||||||
Sbjct 5947 TTTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 5981
Score = 98.7 bits (108), Expect = 2e-15
Identities = 150/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954
||| | ||| | ||||||||| || ||||| || || || | || || | |||||||||
Sbjct 5543 GACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTC 5602
Query 151955 TAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| ||||| || ||||| || || || || || || | | || ||||| || ||
Sbjct 5603 CAGTTGCTTT--CCAGCGAAAATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTGTCC 5660
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||| ||| ||| ||| | || | |||| ||| || ||||| | |||||||||
Sbjct 5661 TGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATAGTT 5720
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || || || ||||| || | |||||
Sbjct 5721 TTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5752
Score = 91.5 bits (100), Expect = 3e-13
Identities = 145/206 (70%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--G 151958
||| | ||||||||| || ||||| || || || | || || | ||||||||| || |
Sbjct 4865 ATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCCAGTTG 4924
Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018
|||| || || || || || || || || || | | || ||||| || || |||||
Sbjct 4925 CTTT--CCAGCAAAAATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTGTCCTGAATC 4982
Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078
||| ||| ||| | || | |||| ||| || ||||| | ||||||||||||||
Sbjct 4983 TTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATAGTTTTGCCA 5042
Query 152079 GTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| || | |||||
Sbjct 5043 GTCAGTGTTTTCACAAAAATTTGCAT 5068
>seq52194
Length=4646
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | |||||| |||||||| |||||||||||||| || | ||| || | ||||||
Sbjct 4366 AGTACTAAATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGATAAGGTACGTCCATCT 4425
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || ||| ||||| |||||||| | || || || | | || || || || |||
Sbjct 4426 TCCAGCTGTTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGGAATACCCTCTTTATCT 4485
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||| || || ||| | || | | |||| || ||||||||| ||||| |||||
Sbjct 4486 TGAATCTTAGCCTTTACATTTTCAATGGTGTCAGACGGCTCTACTTCCAGAGTTATAGTC 4545
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || || ||||| || || | |||||
Sbjct 4546 TTGCCTGTTAGTGTCTTGACAAATATTTGCAT 4577
Score = 104 bits (114), Expect = 5e-17
Identities = 155/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || | ||||| || |||||||| ||||| ||||| || | | || |
Sbjct 3898 GAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCG 3957
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|||||||| || || || ||||||||||| | || || || | | ||||||||
Sbjct 3958 GCCATCTTCCAGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTC 4017
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| |||||||| || ||| ||| | || | | |||| || ||||||||| | |||
Sbjct 4018 CTTATCTTGAATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGCTCTACTTCCAAAGT 4077
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| ||||| || || || || || || || | ||||||
Sbjct 4078 TATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCATT 4117
Score = 89.7 bits (98), Expect = 1e-12
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967
||||| |||||||||||||| ||||| | | ||| | ||||| || | ||| ||
Sbjct 3464 GTAGATTCTTTTTGGATGTTATAATCCGACAGAGTGCGGCCATCCTCCAACTGTTTACCA 3523
Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027
|| ||||| || | ||| ||||| | | || || ||||| ||||| || || ||
Sbjct 3524 GCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTA 3583
Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087
||| | || | |||| || ||| || || | ||| || || || || || ||||||
Sbjct 3584 ACATTTTCGATAGTGTCGGATGGCTCAACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTC 3643
Query 152088 TTCACGAAGACCTGCAT 152104
|| ||||||| ||||||
Sbjct 3644 TTAACGAAGATCTGCAT 3660
>seq21475
Length=13715
Score = 111 bits (122), Expect = 4e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
|||| || |||||||| | || || || ||||| |||||||| || | || || |
Sbjct 11113 AGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGT 11054
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
||||||||||| ||| || || ||||| | | |||||||| | | || ||||||
Sbjct 11053 CCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCC 10994
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| ||||| ||||| ||| ||| | |||| | || || ||| || || || |||
Sbjct 10993 TTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCCACCTCGAGGGTA 10934
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| ||||| ||||| || ||||| ||||| | ||||||
Sbjct 10933 ATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 10895
>seq58137
Length=8097
Score = 100 bits (110), Expect = 7e-16
Identities = 152/213 (71%), Gaps = 5/213 (2%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||||||||| |||||||| || ||||| || | | || | || ||||| |
Sbjct 7739 CAAG-TGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGTCCGTCTTCCA 7681
Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
||||| || ||||| || | | || || || | | || |||||||| |||||
Sbjct 7680 ATTGCTTT--CCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTG 7623
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
|||||| ||| ||| | || | | || ||| || ||||| | |||||| |||||
Sbjct 7622 AATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGTTTT 7563
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
||||| || || ||||| |||| |||||||||
Sbjct 7562 ACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 7530
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151544773450489
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