Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq9095 131 4e-25 seq52194 122 2e-22 seq21475 111 4e-19 seq58137 100 7e-16 >seq9095 Length=14658 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| | |||||| || || || |||||||| || | || || | |||||| Sbjct 5085 AGTACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGTCTGATAGTGTGCGTCCATCT 5144 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || ||||| ||||||||||| ||||| | | || || ||||| ||| Sbjct 5145 TCAAGTTGTTTTCCAGCGAAAATAAGCCTCTGTTGGTCTGGGGGAATCCCCTCCTTATCT 5204 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||||||| ||| ||| | || | |||| ||| ||| |||||||||||||||||| Sbjct 5205 TGAATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTT 5264 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || || || || | ||||| Sbjct 5265 TTACCAGTAAGCGTTTTTACAAAAATTTGCAT 5296 Score = 125 bits (138), Expect = 2e-23 Identities = 170/234 (73%), Gaps = 5/234 (2%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || |||||||| ||||| ||||||||||| ||||| ||||| || || || | || || Sbjct 4620 CTAAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGGATATTATAGTCTGACAATGTA 4679 Query 151944 CTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 | ||||||||| || ||||| || || || || || || || || || | | || | Sbjct 4680 CGCCCATCTTCCAGTTGCTTT--CCAGCAAAAATCAGTCTTTGTTGATCTGGAGGAATAC 4737 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAA 152061 ||||||| ||||||||||| || ||| | |||| | || ||| || ||||| | Sbjct 4738 CTTCCTTGTCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCA 4797 Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTA 152114 ||| |||||||| || || || ||||| ||||| | |||||| ||| |||| Sbjct 4798 AAGTGATAGTTTTCCCAGTCAGTGTCTTTACGAAAATTTGCATTCCACCTCTTA 4851 Score = 114 bits (126), Expect = 3e-20 Identities = 159/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || | |||||| ||||| || ||||||||||| | || || | |||||| Sbjct 6225 AGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGATAGTGTGCGTCCATCT 6284 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 ||||| ||||| || || || ||||| || ||||| || | | ||||| || || | Sbjct 6285 TCTAGCTGCTTT--CCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTAT 6342 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | |||||||| ||| ||| | || | | || ||| ||| ||||| | ||| |||| Sbjct 6343 CCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACTTCTAAAGTGATAG 6402 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACCC 152111 | ||||| || || ||||| ||||| | |||||| |||| Sbjct 6403 TCTTGCCAGTCAGTGTCTTTACGAAAATTTGCATTCCACCC 6443 Score = 107 bits (118), Expect = 4e-18 Identities = 150/209 (72%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCC 151966 |||||| || ||||| || || || || | | ||| | ||||||||||| ||| || Sbjct 5327 AGTAGATTCCTTTTGAATATTATAGTCAGACAGAGTGCGTCCATCTTCTAGCTGTTTGCC 5386 Query 151967 GGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTT 152026 ||||| || |||||||| ||||| | | || |||||||| ||||||||||| || Sbjct 5387 AGCGAAAATCAGCCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTAGCCTT 5446 Query 152027 GACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGT 152086 ||| | |||| | || ||| || ||||| | ||| |||||||| || || || || Sbjct 5447 AACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTTCCCAGTCAGTGT 5506 Query 152087 CTTCACGAAGACCTGCATTTTACC-CTTA 152114 ||| || || | |||||| ||| |||| Sbjct 5507 CTTTACAAAAATTTGCATTCCACCTCTTA 5535 Score = 104 bits (114), Expect = 5e-17 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| | |||||| || || || || ||||| || | | || | |||||| Sbjct 5769 AGTACTAAATGTAAAGTAGATTCCTTCTGAATATTGTAGTCAGACAGTGTGCGTCCATCT 5828 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || || || |||||||| || ||||| | | ||||||||||| | Sbjct 5829 TCAAGCTGCTTT--CCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATTCCTTCCTTAT 5886 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 |||||||||| || ||| | || | |||| || ||| ||||| || || |||| Sbjct 5887 CTTGAATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAG 5946 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||||| || || ||||| || || | |||||| Sbjct 5947 TTTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 5981 Score = 98.7 bits (108), Expect = 2e-15 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 ||| | ||| | ||||||||| || ||||| || || || | || || | ||||||||| Sbjct 5543 GACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTC 5602 Query 151955 TAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || ||||| || ||||| || || || || || || | | || ||||| || || Sbjct 5603 CAGTTGCTTT--CCAGCGAAAATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTGTCC 5660 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| ||| ||| ||| | || | |||| ||| || ||||| | ||||||||| Sbjct 5661 TGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATAGTT 5720 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || || ||||| || | ||||| Sbjct 5721 TTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5752 Score = 91.5 bits (100), Expect = 3e-13 Identities = 145/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--G 151958 ||| | ||||||||| || ||||| || || || | || || | ||||||||| || | Sbjct 4865 ATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCCAGTTG 4924 Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018 |||| || || || || || || || || || | | || ||||| || || ||||| Sbjct 4925 CTTT--CCAGCAAAAATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTGTCCTGAATC 4982 Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078 ||| ||| ||| | || | |||| ||| || ||||| | |||||||||||||| Sbjct 4983 TTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATAGTTTTGCCA 5042 Query 152079 GTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || | ||||| Sbjct 5043 GTCAGTGTTTTCACAAAAATTTGCAT 5068 >seq52194 Length=4646 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | |||||| |||||||| |||||||||||||| || | ||| || | |||||| Sbjct 4366 AGTACTAAATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGATAAGGTACGTCCATCT 4425 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| ||||| |||||||| | || || || | | || || || || ||| Sbjct 4426 TCCAGCTGTTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGGAATACCCTCTTTATCT 4485 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || ||| | || | | |||| || ||||||||| ||||| ||||| Sbjct 4486 TGAATCTTAGCCTTTACATTTTCAATGGTGTCAGACGGCTCTACTTCCAGAGTTATAGTC 4545 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||| || || | ||||| Sbjct 4546 TTGCCTGTTAGTGTCTTGACAAATATTTGCAT 4577 Score = 104 bits (114), Expect = 5e-17 Identities = 155/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | ||||| || |||||||| ||||| ||||| || | | || | Sbjct 3898 GAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCG 3957 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || || || ||||||||||| | || || || | | |||||||| Sbjct 3958 GCCATCTTCCAGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTC 4017 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| |||||||| || ||| ||| | || | | |||| || ||||||||| | ||| Sbjct 4018 CTTATCTTGAATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGCTCTACTTCCAAAGT 4077 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || ||||| || || || || || || || | |||||| Sbjct 4078 TATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCATT 4117 Score = 89.7 bits (98), Expect = 1e-12 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 ||||| |||||||||||||| ||||| | | ||| | ||||| || | ||| || Sbjct 3464 GTAGATTCTTTTTGGATGTTATAATCCGACAGAGTGCGGCCATCCTCCAACTGTTTACCA 3523 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || ||||| || | ||| ||||| | | || || ||||| ||||| || || || Sbjct 3524 GCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTA 3583 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 ||| | || | |||| || ||| || || | ||| || || || || || |||||| Sbjct 3584 ACATTTTCGATAGTGTCGGATGGCTCAACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTC 3643 Query 152088 TTCACGAAGACCTGCAT 152104 || ||||||| |||||| Sbjct 3644 TTAACGAAGATCTGCAT 3660 >seq21475 Length=13715 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| || |||||||| | || || || ||||| |||||||| || | || || | Sbjct 11113 AGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGT 11054 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||||||||| ||| || || ||||| | | |||||||| | | || |||||| Sbjct 11053 CCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCC 10994 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || ||||| ||||| ||| ||| | |||| | || || ||| || || || ||| Sbjct 10993 TTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCCACCTCGAGGGTA 10934 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || ||||| ||||| || ||||| ||||| | |||||| Sbjct 10933 ATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 10895 >seq58137 Length=8097 Score = 100 bits (110), Expect = 7e-16 Identities = 152/213 (71%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| |||||||| || ||||| || | | || | || ||||| | Sbjct 7739 CAAG-TGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGTCCGTCTTCCA 7681 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 ||||| || ||||| || | | || || || | | || |||||||| ||||| Sbjct 7680 ATTGCTTT--CCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTG 7623 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 |||||| ||| ||| | || | | || ||| || ||||| | |||||| ||||| Sbjct 7622 AATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGTTTT 7563 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||||| || || ||||| |||| ||||||||| Sbjct 7562 ACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 7530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151544773450489