Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq117556 226 3e-54 seq91323 192 6e-44 seq7375 138 1e-27 >seq117556 Length=207 Score = 226 bits (250), Expect = 3e-54 Identities = 142/152 (93%), Gaps = 1/152 (1%) Strand=Plus/Plus Query 8467 CCACCACGCCAAGCTAATTTT-TGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCC 8525 |||||| ||| ||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 1 CCACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCC 60 Query 8526 AGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTG 8585 |||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct 61 AGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTG 120 Query 8586 GGATTACAGGCATGAGCCACCGCGCCTGGCCC 8617 ||||||||||| |||||||||||||||||||| Sbjct 121 GGATTACAGGCGTGAGCCACCGCGCCTGGCCC 152 >seq91323 Length=201 Score = 192 bits (212), Expect = 6e-44 Identities = 140/160 (88%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 8346 TCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCC 8405 || |||||| ||||||||||||||||||||| ||||| ||||||||||||||| ||| Sbjct 41 TCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGCGATCTTGGCTCACTGCAACCTCTGCC 100 Query 8406 TCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAA 8465 |||| ||||||||| ||||||| |||||||||||| |||||||||||| ||||||| Sbjct 101 TCCCAGGTTCAAGCGATTCTCC-GCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCC 159 Query 8466 GCCACCACGCCAAGCTAA-TTTTTGTATTTTTAGTAGAGA 8504 ||||||||||| ||||| ||||||||||||||||||||| Sbjct 160 GCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGA 199 >seq7375 Length=9560 Score = 138 bits (152), Expect = 1e-27 Identities = 157/211 (74%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 23777 TTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCT 23836 |||||||||| ||||||| |||| ||||| || ||||||| |||||| |||||||| | Sbjct 4032 TTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTT 3973 Query 23837 GAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTA 23896 |||| ||||| || || || ||||||| || |||||| || | | || | | | | Sbjct 3972 GAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCCACCA 3913 Query 23897 AATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAAT 23956 | || || ||||||||||||||| ||| |||||||| || | |||| || ||||||| Sbjct 3912 AGTTCTCATTAACAATACCATCAGAAGCTGCAAAGAATGCTAAGACATGCTTGATAAAAT 3853 Query 23957 GTCTTTCATCAGTTGATAATTTTTTCCAATC 23987 || | ||| | | |||| | | |||||| Sbjct 3852 GTTTCTCACAATCTTTTAATGTCTCCCAATC 3822 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||||||| ||| | |||||| || || ||||| ||||| | ||||||||||| Sbjct 4857 TCATCCCTAGAAATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTC 4798 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | ||||||||||| |||||| || || || || || |||||||| || ||||| || Sbjct 4797 AACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAAAGCA 4738 Query 23653 ACAAGACGTGTACCAAATGTTGC 23675 | | |||| |||||||| || Sbjct 4737 ATTATACGTTCTCCAAATGTAGC 4715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520484402862600