Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq117556 226 3e-54
seq91323 192 6e-44
seq7375 138 1e-27
>seq117556
Length=207
Score = 226 bits (250), Expect = 3e-54
Identities = 142/152 (93%), Gaps = 1/152 (1%)
Strand=Plus/Plus
Query 8467 CCACCACGCCAAGCTAATTTT-TGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCC 8525
|||||| ||| ||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 1 CCACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCC 60
Query 8526 AGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTG 8585
|||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct 61 AGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTG 120
Query 8586 GGATTACAGGCATGAGCCACCGCGCCTGGCCC 8617
||||||||||| ||||||||||||||||||||
Sbjct 121 GGATTACAGGCGTGAGCCACCGCGCCTGGCCC 152
>seq91323
Length=201
Score = 192 bits (212), Expect = 6e-44
Identities = 140/160 (88%), Gaps = 2/160 (1%)
Strand=Plus/Plus
Query 8346 TCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCC 8405
|| |||||| ||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct 41 TCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGCGATCTTGGCTCACTGCAACCTCTGCC 100
Query 8406 TCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAA 8465
|||| ||||||||| ||||||| |||||||||||| |||||||||||| |||||||
Sbjct 101 TCCCAGGTTCAAGCGATTCTCC-GCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCC 159
Query 8466 GCCACCACGCCAAGCTAA-TTTTTGTATTTTTAGTAGAGA 8504
||||||||||| ||||| |||||||||||||||||||||
Sbjct 160 GCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGA 199
>seq7375
Length=9560
Score = 138 bits (152), Expect = 1e-27
Identities = 157/211 (74%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 23777 TTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCT 23836
|||||||||| ||||||| |||| ||||| || ||||||| |||||| |||||||| |
Sbjct 4032 TTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTT 3973
Query 23837 GAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTA 23896
|||| ||||| || || || ||||||| || |||||| || | | || | | | |
Sbjct 3972 GAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCCACCA 3913
Query 23897 AATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAAT 23956
| || || ||||||||||||||| ||| |||||||| || | |||| || |||||||
Sbjct 3912 AGTTCTCATTAACAATACCATCAGAAGCTGCAAAGAATGCTAAGACATGCTTGATAAAAT 3853
Query 23957 GTCTTTCATCAGTTGATAATTTTTTCCAATC 23987
|| | ||| | | |||| | | ||||||
Sbjct 3852 GTTTCTCACAATCTTTTAATGTCTCCCAATC 3822
Score = 91.5 bits (100), Expect = 2e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592
||||||||| ||| | |||||| || || ||||| ||||| | |||||||||||
Sbjct 4857 TCATCCCTAGAAATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTC 4798
Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652
| ||||||||||| |||||| || || || || || |||||||| || ||||| ||
Sbjct 4797 AACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAAAGCA 4738
Query 23653 ACAAGACGTGTACCAAATGTTGC 23675
| | |||| |||||||| ||
Sbjct 4737 ATTATACGTTCTCCAAATGTAGC 4715
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 520484402862600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |