Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq18220 147 2e-30 seq52194 102 6e-17 seq21475 102 6e-17 seq9095 96.9 2e-15 seq133270 82.4 5e-11 >seq18220 Length=5896 Score = 147 bits (162), Expect = 2e-30 Identities = 357/535 (67%), Gaps = 22/535 (4%) Strand=Plus/Plus Query 5737 TTACCTA-ACCCTTGATTCATGGAGTTTAACAAGTCGCCGTTGTCCGCGTCGATTTCCCA 5795 ||||| | |||| || ||||||| || | | || ||||| || ||||| | |||||| Sbjct 5346 TTACCGAGACCCATG-TTCATGGCATTCAGTAGATCACCGTTATCGGCGTCCACTTCCCA 5404 Query 5796 TCCAAATAGACCCCCCAGCCCCTTTTGGATGACATATTTTCCCTTGGCCGTCACGGACCT 5855 |||| ||||| || ||| || | | |||||||| || || | | ||||| || Sbjct 5405 AGCAAAGAGACCACCTAGCTTGTTATTTCTTACATATTTACCTTTTTCAATAACGGATCT 5464 Query 5856 CTCGTCGTCGTAGGTGACGAGATCGTC-GTTG-TGGT----ACACGTAGGGCGCTTGCGC 5909 | | || ||||| || ||||| | |||| |||| | ||||| || ||||| || Sbjct 5465 AGCATTATCATAGGTTACAAGATCTCCAGTTGATGGTCTGAAGACGTAAGGGGCTTGGGC 5524 Query 5910 CACTCCGTCGTAAT-----------TCGGGTTGGG--ATACCGGTTCGTGATGTCTTTGT 5956 || |||||||| | | ||| | || | |||| || || ||| Sbjct 5525 GACATTGTCGTAATGGAACTCCCACTTGCCTTGAGCAATTTCA-TTCGCAATCTCCCTGT 5583 Query 5957 AGTCCACGACACCGTTTTCCCAGGAACCCTTTACGGGACCCGTGGCAGTGCCTGTGAAGG 6016 |||| || || |||| || ||| | || || || || || || || |||||||||||| Sbjct 5584 AGTCAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGG 5643 Query 6017 GATTGTTGTTGGTGATGTTGTGGATTCCACGCCATCCCCTGCCGTACATGGCCACGCCCA 6076 || |||||| || | || | ||| ||| || | || ||||| || || || | Sbjct 5644 GAATGTTGTCTTTGTAATCATGAACACCAGTCCAGCCACGACCATACATAGCAACACCTA 5703 Query 6077 CCACCAATTTGTTTGGGTTCACGCTCTGATTGAGCAGGCGTTGGACGGCGAACGCGGTGG 6136 | || | || || || ||||| | ||| |||| | || || |||| | | | Sbjct 5704 CTACAATCTTCTTAGGATTCACTCCCTGCGCCAGCAAGTATTTTACTCCGAAGTCAGATG 5763 Query 6137 TGTACTTTTCGGTGGGGTTCCATGTGGGCGCGTACAGGGGCGTCTGCAGTCCCAGATCGG 6196 |||| |||| |||| ||||| | |||||||||| ||||| || |||| ||| Sbjct 5764 TGTAAGTTTCCTTGGGATTCCACGCAGGCGCGTACAATGGCGTTTGATGTCCTAGAGTAT 5823 Query 6197 TGTTAGACCAGGCTCCCTTGAAATCGTACGTCATGACGAAAATATGATCCAGATA 6251 || ||||||||||||||||| ||||| |||| | |||||||||||||| ||| Sbjct 5824 CATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATA 5878 >seq52194 Length=4646 Score = 102 bits (112), Expect = 6e-17 Identities = 168/239 (70%), Gaps = 5/239 (2%) Strand=Plus/Plus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || |||| ||| | || || | ||||| || ||||||||||||||| Sbjct 4341 TATTTGCATACCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCCTTTTGGATGTT 4400 Query 44161 GTAATCGGCGAGTTGG--CGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGC 44218 ||| || ||| || || | || |||||||| || ||||||||||| | ||| || Sbjct 4401 GTAGTC--CGATAAGGTACGTCCATCTTCCAGCTGTTTGCCGGCAAAGATAAGACGTTGT 4458 Query 44219 TGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCG 44278 ||||||| || | ||| || || || ||||| ||| | || | |||||||| Sbjct 4459 TGATCTGGGGGAATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCA 4518 Query 44279 GCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | | || || |||| || || ||||| || || || ||||| || || |||||||| Sbjct 4519 GACGGCTCTACTTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 4577 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 || ||||||||||| ||||| | || ||| | || |||| ||| || || |||||| Sbjct 3470 TCTTTTTGGATGTTATAATCCGACAGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAG 3529 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 || | |||||| || |||| || | || ||||| || ||||| ||| | || Sbjct 3530 ATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTT 3589 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | || ||||||| | || ||||||| || || ||||| || || || ||||| ||| Sbjct 3590 TCGATAGTGTCGGATGGCTCAACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACG 3649 Query 44327 AAGATTTGCAT 44337 ||||| ||||| Sbjct 3650 AAGATCTGCAT 3660 >seq21475 Length=13715 Score = 102 bits (112), Expect = 6e-17 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 |||||||| |||||||| || | | | || | || || || || || || |||||| Sbjct 11086 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAG 11027 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 |||||||| ||||| |||| || | ||||||||| || || || || | || Sbjct 11026 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTT 10967 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 |||| || || | || |||||||| | ||||| || || ||||| |||||||| ||| Sbjct 10966 TCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACG 10907 Query 44327 AAGATTTGCATGATGTGA 44344 || |||||||| ||||| Sbjct 10906 AAAATTTGCAT--TGTGA 10891 >seq9095 Length=14658 Score = 96.9 bits (106), Expect = 2e-15 Identities = 164/238 (69%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| || | || | |||||||| ||| | || |||||| ||||| || || Sbjct 6431 TTGCATTCCACCCCGTAGACGCAACACCAAGTGCAAAGTAGACTCCTTCTGGATATTATA 6490 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | | | |||| | || || || ||||| ||||| || |||| | || ||||| Sbjct 6491 GTCTGACAATGTGCGCCCATCTTCGAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATC 6550 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || ||| | |||||||| || ||||| ||| | || | || || || | | Sbjct 6551 TGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGC 6610 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 |||||| |||| || || || || || || | || || |||||||||||||||||| Sbjct 6611 TTCCACTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCATGATG 6668 >seq133270 Length=334 Score = 82.4 bits (90), Expect = 5e-11 Identities = 128/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 44155 GATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACG 44214 ||||||||| || | || ||| | || |||| ||||| ||||||||||| | ||| Sbjct 1 GATGTTGTAGTCAGACAGGGTGCGACCATCTTCCAATTGCTTACCGGCAAAGATAAGACG 60 Query 44215 CTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGT 44274 ||||||||| | ||| | || || || || || || || | || | || || Sbjct 61 CTGCTGATCAGGAGGGATGCCCTCTTTGTCTTGAATTTTAGCTTTTACATTTTCAATAGT 120 Query 44275 GTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTG 44334 || | || |||||| |||| ||||| |||||||| || ||||| || || || || || Sbjct 121 ATCAGAGGGTTCCACTTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTG 180 Query 44335 CAT 44337 ||| Sbjct 181 CAT 183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359314922900703