Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq18220 147 2e-30
seq52194 102 6e-17
seq21475 102 6e-17
seq9095 96.9 2e-15
seq133270 82.4 5e-11
>seq18220
Length=5896
Score = 147 bits (162), Expect = 2e-30
Identities = 357/535 (67%), Gaps = 22/535 (4%)
Strand=Plus/Plus
Query 5737 TTACCTA-ACCCTTGATTCATGGAGTTTAACAAGTCGCCGTTGTCCGCGTCGATTTCCCA 5795
||||| | |||| || ||||||| || | | || ||||| || ||||| | ||||||
Sbjct 5346 TTACCGAGACCCATG-TTCATGGCATTCAGTAGATCACCGTTATCGGCGTCCACTTCCCA 5404
Query 5796 TCCAAATAGACCCCCCAGCCCCTTTTGGATGACATATTTTCCCTTGGCCGTCACGGACCT 5855
|||| ||||| || ||| || | | |||||||| || || | | ||||| ||
Sbjct 5405 AGCAAAGAGACCACCTAGCTTGTTATTTCTTACATATTTACCTTTTTCAATAACGGATCT 5464
Query 5856 CTCGTCGTCGTAGGTGACGAGATCGTC-GTTG-TGGT----ACACGTAGGGCGCTTGCGC 5909
| | || ||||| || ||||| | |||| |||| | ||||| || ||||| ||
Sbjct 5465 AGCATTATCATAGGTTACAAGATCTCCAGTTGATGGTCTGAAGACGTAAGGGGCTTGGGC 5524
Query 5910 CACTCCGTCGTAAT-----------TCGGGTTGGG--ATACCGGTTCGTGATGTCTTTGT 5956
|| |||||||| | | ||| | || | |||| || || |||
Sbjct 5525 GACATTGTCGTAATGGAACTCCCACTTGCCTTGAGCAATTTCA-TTCGCAATCTCCCTGT 5583
Query 5957 AGTCCACGACACCGTTTTCCCAGGAACCCTTTACGGGACCCGTGGCAGTGCCTGTGAAGG 6016
|||| || || |||| || ||| | || || || || || || || ||||||||||||
Sbjct 5584 AGTCAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGG 5643
Query 6017 GATTGTTGTTGGTGATGTTGTGGATTCCACGCCATCCCCTGCCGTACATGGCCACGCCCA 6076
|| |||||| || | || | ||| ||| || | || ||||| || || || |
Sbjct 5644 GAATGTTGTCTTTGTAATCATGAACACCAGTCCAGCCACGACCATACATAGCAACACCTA 5703
Query 6077 CCACCAATTTGTTTGGGTTCACGCTCTGATTGAGCAGGCGTTGGACGGCGAACGCGGTGG 6136
| || | || || || ||||| | ||| |||| | || || |||| | | |
Sbjct 5704 CTACAATCTTCTTAGGATTCACTCCCTGCGCCAGCAAGTATTTTACTCCGAAGTCAGATG 5763
Query 6137 TGTACTTTTCGGTGGGGTTCCATGTGGGCGCGTACAGGGGCGTCTGCAGTCCCAGATCGG 6196
|||| |||| |||| ||||| | |||||||||| ||||| || |||| |||
Sbjct 5764 TGTAAGTTTCCTTGGGATTCCACGCAGGCGCGTACAATGGCGTTTGATGTCCTAGAGTAT 5823
Query 6197 TGTTAGACCAGGCTCCCTTGAAATCGTACGTCATGACGAAAATATGATCCAGATA 6251
|| ||||||||||||||||| ||||| |||| | |||||||||||||| |||
Sbjct 5824 CATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATA 5878
>seq52194
Length=4646
Score = 102 bits (112), Expect = 6e-17
Identities = 168/239 (70%), Gaps = 5/239 (2%)
Strand=Plus/Plus
Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160
||||| ||| || |||| ||| | || || | ||||| || |||||||||||||||
Sbjct 4341 TATTTGCATACCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCCTTTTGGATGTT 4400
Query 44161 GTAATCGGCGAGTTGG--CGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGC 44218
||| || ||| || || | || |||||||| || ||||||||||| | ||| ||
Sbjct 4401 GTAGTC--CGATAAGGTACGTCCATCTTCCAGCTGTTTGCCGGCAAAGATAAGACGTTGT 4458
Query 44219 TGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCG 44278
||||||| || | ||| || || || ||||| ||| | || | ||||||||
Sbjct 4459 TGATCTGGGGGAATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCA 4518
Query 44279 GCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| | || || |||| || || ||||| || || || ||||| || || ||||||||
Sbjct 4519 GACGGCTCTACTTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 4577
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206
|| ||||||||||| ||||| | || ||| | || |||| ||| || || ||||||
Sbjct 3470 TCTTTTTGGATGTTATAATCCGACAGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAG 3529
Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266
|| | |||||| || |||| || | || ||||| || ||||| ||| | ||
Sbjct 3530 ATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTT 3589
Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326
| || ||||||| | || ||||||| || || ||||| || || || ||||| |||
Sbjct 3590 TCGATAGTGTCGGATGGCTCAACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACG 3649
Query 44327 AAGATTTGCAT 44337
||||| |||||
Sbjct 3650 AAGATCTGCAT 3660
>seq21475
Length=13715
Score = 102 bits (112), Expect = 6e-17
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206
|||||||| |||||||| || | | | || | || || || || || || ||||||
Sbjct 11086 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAG 11027
Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266
|||||||| ||||| |||| || | ||||||||| || || || || | ||
Sbjct 11026 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTT 10967
Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326
|||| || || | || |||||||| | ||||| || || ||||| |||||||| |||
Sbjct 10966 TCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACG 10907
Query 44327 AAGATTTGCATGATGTGA 44344
|| |||||||| |||||
Sbjct 10906 AAAATTTGCAT--TGTGA 10891
>seq9095
Length=14658
Score = 96.9 bits (106), Expect = 2e-15
Identities = 164/238 (69%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| || | || | |||||||| ||| | || |||||| ||||| || ||
Sbjct 6431 TTGCATTCCACCCCGTAGACGCAACACCAAGTGCAAAGTAGACTCCTTCTGGATATTATA 6490
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|| | | | |||| | || || || ||||| ||||| || |||| | || |||||
Sbjct 6491 GTCTGACAATGTGCGCCCATCTTCGAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATC 6550
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
|| ||| | |||||||| || ||||| ||| | || | || || || | |
Sbjct 6551 TGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGC 6610
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
|||||| |||| || || || || || || | || || ||||||||||||||||||
Sbjct 6611 TTCCACTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCATGATG 6668
>seq133270
Length=334
Score = 82.4 bits (90), Expect = 5e-11
Identities = 128/183 (70%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 44155 GATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACG 44214
||||||||| || | || ||| | || |||| ||||| ||||||||||| | |||
Sbjct 1 GATGTTGTAGTCAGACAGGGTGCGACCATCTTCCAATTGCTTACCGGCAAAGATAAGACG 60
Query 44215 CTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGT 44274
||||||||| | ||| | || || || || || || || | || | || ||
Sbjct 61 CTGCTGATCAGGAGGGATGCCCTCTTTGTCTTGAATTTTAGCTTTTACATTTTCAATAGT 120
Query 44275 GTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTG 44334
|| | || |||||| |||| ||||| |||||||| || ||||| || || || || ||
Sbjct 121 ATCAGAGGGTTCCACTTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTG 180
Query 44335 CAT 44337
|||
Sbjct 181 CAT 183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359314922900703
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |