Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq9095 147 5e-30
seq21475 138 3e-27
seq52194 120 7e-22
seq58137 102 2e-16
seq10803 98.7 2e-15
seq133270 84.2 5e-11
>seq9095
Length=14658
Score = 147 bits (162), Expect = 5e-30
Identities = 164/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| |||||||| || || || ||||| || ||| | || |||||| || |||
Sbjct 5749 CAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCTGAC 5690
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || ||| ||||||||||||||||||||| || ||||| || || |||
Sbjct 5689 ACAATCGAAAATGTTAAAGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAACAA 5630
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| || ||||| ||||| || || |||||||| | || | | || ||||| ||
Sbjct 5629 AGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAATATC 5570
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || || || || ||||| | || ||| | || |||
Sbjct 5569 CAGAAGGAGTCTACTTTGCATTTAGTCTTGCGTCTAAGA 5531
Score = 143 bits (158), Expect = 6e-29
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| |||||||| || || || ||||| || ||| | || |||||| || |||
Sbjct 5065 CAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCTGAC 5006
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || ||| ||||||||||||||||||||| || ||||| || || |||
Sbjct 5005 ACAATCGAAAATGTTAAAGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAACAA 4946
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| || || || ||||| || || |||||||| | || | | || ||||| ||
Sbjct 4945 AGACTGATTTTTGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAATATC 4886
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || || || || ||||| | || ||| | || |||
Sbjct 4885 CAGAAGGAGTCTACTTTGCATTTAGTGTTGCGTCTAAGA 4847
Score = 132 bits (146), Expect = 1e-25
Identities = 153/205 (75%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| |||||| | || || ||||| ||||| | || |||||| || ||
Sbjct 6661 CAAATCTTCGTAAAAACTTTAACTGGGAAAACCATCACATTGGAAGTGGAAGCTTCTGAT 6602
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || ||||||||| ||||| ||||| || ||||| || || |||
Sbjct 6601 ACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAACAA 6542
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| || ||||||||||| || ||||||||||| | || | | || ||||| ||
Sbjct 6541 AGACTGATTTTCGCCGGAAAGCAACTCGAAGATGGGCGCACATTGTCAGACTATAATATC 6482
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || |||| ||||
Sbjct 6481 CAGAAGGAGTCTACTTTGCA-CTTG 6458
Score = 125 bits (138), Expect = 2e-23
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || || || || ||||| ||||| | || |||||| || ||
Sbjct 4837 CAAATTTTCGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTCTGAT 4778
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || || ||||| ||||| ||||| || ||||| || || |||
Sbjct 4777 ACAATAGAAAATGTTAAGGCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAA 4718
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| || || || ||||| || || |||||||| | || | | || ||||| ||
Sbjct 4717 AGACTGATTTTTGCTGGAAAGCAACTGGAAGATGGGCGTACATTGTCAGACTATAATATC 4658
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| |||||||| || || || |||||| | ||||| |||
Sbjct 4657 CAGAAAGAATCTACTCTTCACCTTGTTCTCAGACTTAGA 4619
Score = 123 bits (136), Expect = 6e-23
Identities = 151/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || || || || || || ||||| | || || || || ||
Sbjct 6433 CAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTAGAAGTTGAGCCTTCTGAT 6374
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||| || |||||||| ||||| ||||| || || || ||||||
Sbjct 6373 ACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCAGCAA 6314
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||||| || || ||||| ||||| ||||||||| | || || | ||||| ||| |
Sbjct 6313 AGACTTATTTTTGCTGGAAAGCAGCTAGAAGATGGACGCACACTATCTGATTACAACATT 6254
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| |||||||| || |||| || ||
Sbjct 6253 CAGAAAGAATCTACTTTGCACCTAGT 6228
>seq21475
Length=13715
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || || || || ||||| || |||||||||||||| ||| ||
Sbjct 10899 CAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTCTGAT 10958
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||| || || || || || ||||| || || || |||||||||
Sbjct 10959 ACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCAGCAA 11018
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || ||||| || ||||||||| | || | | || || ||| |
Sbjct 11019 CGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAACATT 11078
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
||||| ||||| ||| ||||||||||
Sbjct 11079 CAAAAGGAATCCACATTGCATCTTGT 11104
>seq52194
Length=4646
Score = 120 bits (132), Expect = 7e-22
Identities = 147/201 (73%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||||| || || || || ||||| | ||||| || || |||
Sbjct 3657 CAGATCTTCGTTAAGACTCTTACTGGGAAGACCATCACTTTGGAGGTTGAGCCATCCGAC 3598
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || || ||||| || ||||| || || || || || ||||| ||
Sbjct 3597 ACTATCGAAAATGTTAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAACAG 3538
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || |||||| | || ||||| | ||||| | ||||||||| ||
Sbjct 3537 CGTCTCATCTTTGCTGGTAAACAGTTGGAGGATGGCCGCACTCTGTCGGATTATAACATC 3478
Query 178104 CAAAAAGAATCAACACTGCAT 178124
||||||||||| || |||||
Sbjct 3477 CAAAAAGAATCTACCTTGCAT 3457
Score = 118 bits (130), Expect = 3e-21
Identities = 150/205 (73%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || ||||| || || |||||||| || || | || || || || |||
Sbjct 4113 CAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTAGAGCCATCCGAC 4054
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || ||| |||||||| || || |||||||| ||||| || || |||
Sbjct 4053 ACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAACAA 3994
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||||||||| || || || || |||||||| | || || | || || || ||
Sbjct 3993 CGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGCCGCACCCTGTCTGACTACAATATC 3934
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| ||||| || || || || ||||
Sbjct 3933 CAGAAAGAGTCCACCCTTCA-CTTG 3910
>seq58137
Length=8097
Score = 102 bits (112), Expect = 2e-16
Identities = 152/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | || || |||||||| || || || ||||| || || | || || |||
Sbjct 7530 AAAATGC---AGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAA 7586
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| || || || || || || ||| || ||||| ||||| ||||| || |||||
Sbjct 7587 CCTTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCA 7646
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|| || ||||| | || ||||| ||||| || | ||||| ||| | || ||| | ||
Sbjct 7647 GATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACCCTTTCTGAC 7706
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128
|| || | ||||||||||| || || || ||||
Sbjct 7707 TACAATATTCAAAAAGAATCTACTCTTCA-CTTG 7739
>seq10803
Length=5210
Score = 98.7 bits (108), Expect = 2e-15
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||||||||| || || || || || |||||||| ||||| || ||| |||
Sbjct 3672 CAGATTTTCGTGAAAACCCTAACGGGTAAGACCATCACCCTTGAGGTTGAGCCCTCGGAC 3731
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042
|| |||||||| ||||| ||||| || || ||||| ||||| || || ||||||||
Sbjct 3732 ACTATCGAGAATGTCAAGGCCAAGATCCAAGATAAAGAGGGAATTCCCCCAGACCAGCA 3790
>seq133270
Length=334
Score = 84.2 bits (92), Expect = 5e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
|| || || ||||||||||| || |||||||| || ||||| ||||| || || || ||
Sbjct 327 AAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAACAACGTCTTATTTTTGCGGGCAAG 268
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCA 178123
|| | |||||||| | || || | || || ||| ||||||||||||| || ||||
Sbjct 267 CAATTAGAAGATGGTCGTACACTATCTGACTACAACATCCAAAAAGAATCTACTTTGCA 209
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1201356720211046
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |