Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27]
632,176 sequences; 365,010,054 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq19446 210 2e-49
seq14063 194 1e-44
seq26980 109 5e-19
seq422991 104 2e-17
seq78338 100 2e-16
seq78339 98.7 8e-16
>seq19446
Length=4212
Score = 210 bits (232), Expect = 2e-49
Identities = 489/725 (67%), Gaps = 13/725 (2%)
Strand=Plus/Minus
Query 102322 GTTGGACCACGCGCCCTTAAAATCGTAACTCATGAGGAATATTTTATCAAGGAACCTTTG 102381
||| ||||| || ||||| || || |||||||| | ||| || | ||| | | ||||
Sbjct 2365 GTTTGACCAGGCTCCCTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAATTTTG 2306
Query 102382 AGCCGCGTCGTACTTCACCACGGCAATTTTGTCGTAGCCCGAACTAATCGCGCTCGTCAG 102441
|||| | |||| | || || ||||| || | || | ||||| || || |
Sbjct 2305 AGCCTTGCCGTAGTCAACGACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAAGTTAA 2246
Query 102442 CTCGTACGTCTTGTTCGTTTGCAGCTGC-AGTTCGTCCAGCATGGCGCGCAACTCTTTCA 102500
||||| |||| | || ||||| ||||| || ||||| | || || |||||||
Sbjct 2245 TTCGTATTTCTTAC-CATTCTTAGCTGAGAGTTCATCGAGCATCTCACGTAATTCTTTCA 2187
Query 102501 GCAAAACAAGGTACGTGTCGGCGTCGCGCTCGCCGTTGCCGAGCGCCGGGTTGGCGCCCT 102560
|||| | || || | || || | | | ||||| | ||||| || || |
Sbjct 2186 TCAAACTTACATAGCAATCACCATCTT-CTGGGC--TACCGAGATCAGGGTTAGCACCTT 2130
Query 102561 TGCCGCCCGGAAACTCCCAATCGATGTCCACCCCGTCGAAAAACTTCCACACCTGCAAAA 102620
|||| || || |||||||||||||| || || || ||||| || ||||| | | |
Sbjct 2129 TGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAGAAGGA 2070
Query 102621 ACTCTTTAACGGATTCGACAAACACGCGC-CGCTTGTCCGCGTCGTGCATGAAATAGAAC 102679
|||| || || || | ||||| || | | ||| ||| | || ||||
Sbjct 2069 ACTCCTTTACTGACTGCACAAAT-CGTGTTCTCTTAGATTTGTCAACAAAAAAGAAGAAA 2011
Query 102680 GGGTCGGACAGCGTCCAGCCGCCAATGGACGGCAGGATTTTCAAATGCGGGTTTGCCAGC 102739
|| || | |||||||| || ||||| || || || || || || | ||| || |
Sbjct 2010 GGATCAGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTTAATTCAGGGCGAGCTTGT 1951
Query 102740 TTGGCCGCCATCAACTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGCGGATACGCCC 102799
|| | ||| || |||||||||||||||||||||||||||||||||| || | ||
Sbjct 1950 TTTAATGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCCT 1891
Query 102800 TTTTGCGGCTTTTGTATGGCGGCCCACGGGTCGTGGATAGCGACCTTAAAGTCTGCGCGG 102859
||||| || ||||||| || ||||| || |||||||| | ||| || ||||| | |||
Sbjct 1890 TTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGG 1831
Query 102860 CCTTTGCACGAGCGCTGCAGCGCTTCAAAACTGCCGGGAAT-GGTCTTGAGCGCGTCGTT 102918
|| |||| || |||||||| |||| ||||||||| ||| | || ||| ||| ||
Sbjct 1830 CCGCTGCAGGACCGCTGCAGTGCTTGAAAACTGCCTTCAATCTCTTTTAAGC-TGTCATT 1772
Query 102919 TAGCCCGTCGCCGCCGCAAATCGGGATGAAGCCGTACAGCAGATGGGACAGGTTGGGCAG 102978
| ||||| ||||||||||| || || |||||||| |||| ||| | || || || |
Sbjct 1771 GATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAGTAAGATTAGGTAT 1712
Query 102979 CGGCACTTTGTCCACCGGAAA--GCCGCGGCCGTACACGCCCCACTCTACGAAATACGCG 103036
|| | ||||| || || || || || |||||||| |||||||| || ||
Sbjct 1711 AGGTATGCGATCCACGGGGAATTTCCTAGG--ATAGACGCCCCATTCTACGAAGTAGGCA 1654
Query 103037 GCCAC 103041
||||
Sbjct 1653 CCCAC 1649
>seq14063
Length=7913
Score = 194 bits (214), Expect = 1e-44
Identities = 209/277 (75%), Gaps = 0/277 (0%)
Strand=Plus/Minus
Query 29024 CACGCCTCAGTCATCACCCGCTGCACAAAGTCGCGGCCCTTGACGAGCAGCACGTACTCG 29083
|||||||| || |||||| ||| || | || || |||||||| || ||||||| ||
Sbjct 7183 CACGCCTCCGTGATCACCTTCTGGACGTACTCTCGACCCTTGACCAGTTGCACGTAAGCG 7124
Query 29084 CAGCGGTCGTACCAGCGGGCGTGTTGCTGCCACGGCGCGTCGTCGGGTTCCCAATCCTTC 29143
|| |||||| ||||||| ||||| |||| ||||||| ||||||| ||||| |||||
Sbjct 7123 CACCGGTCGAACCAGCGCGCGTGCTGCTCCCACGGCACGTCGTCATTCTCCCAGTCCTTG 7064
Query 29144 AGACCGCCGTCGCAGCAAAAGCACCGCGTCTTGTCGCCCTGGCCAGTGTAAAAGAATCCG 29203
|| |||||||| ||| | |||||| || ||||| |||||||| ||||||||||||||
Sbjct 7063 AGGCCGCCGTCACAGTAGAAGCACTTTGTTTTGTCACCCTGGCCGGTGTAAAAGAATCCC 7004
Query 29204 GCCTCGGCCAACTCTTCGGGCCGCTGTTTCAACCCGCGGGGCCACTCCGCAAAGGTGCGC 29263
|| ||||| | || ||||| |||||||| | ||| ||||| || |||| ||||
Sbjct 7003 GCTTCGGCGAGTTCCTCGGGTTTCTGTTTCATACTGCGTGGCCAGTCGCTGAAGGAGCGC 6944
Query 29264 AAACGCGCGGCTTCCGTGGCATACTGCGGGTGCGCGG 29300
| || || || || | ||| || ||| |||| |||
Sbjct 6943 AGGCGGGCCGCCTCGGAGGCGTAGCGCGCGTGCACGG 6907
Score = 114 bits (126), Expect = 1e-20
Identities = 104/131 (79%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 29354 CGCACAAACGGACACTGCGGCGCCCACCGCTTGTGGTCCGTTTCCGGGTCGTCGCCCCTT 29413
|||| || || ||||| ||||||||||||| ||| ||| | | || ||||| |||
Sbjct 6787 CGCAGGAAGGGGCACTGGGGCGCCCACCGCTGGTGATCCTTCGCGGGATCGTCACCCGGA 6728
Query 29414 ACCCAATTCGTAATCTCTACCTTGCAAAACGCGCAGCGCACCTCGTCGCCGCGGCCCAAG 29473
||||| ||| |||| ||||| || |||||||||||||| || || ||||||||||||| |
Sbjct 6727 ACCCATTTCATAATTTCTACTTTACAAAACGCGCAGCGTACTTCATCGCCGCGGCCCAGG 6668
Query 29474 TAGTAGAACCC 29484
|| ||||| ||
Sbjct 6667 TAATAGAAGCC 6657
>seq26980
Length=2195
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||| | |||||||| || ||||| || || |||||||||| || || | | ||
Sbjct 1169 AGCACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCCGATAGTGTCCGCCCATCT 1110
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
||||| || || || || |||| |||||||| || || || | ||||||||||||
Sbjct 1109 TCCAGTTGCTTTCCGGCGAAAATTAGTCTCTGTTGATCTGGAGGAATGCCTTCCTTGTCT 1050
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
|||||| ||||| | ||| |||||| | || ||||| || |||||
Sbjct 1049 TGAATCTTTGCCTTCACGTTCTCGATTGTATCAGAAGCTTCTACTTCCAATGTGATGGTT 990
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAATCTCTTATAA 21191
|| || ||||| ||||| || || |||||||| ||||||| | ||||
Sbjct 989 TTCCCAGTTAAGGTTTTTACGAAAATTTGCATGATGAATCTGTAATAA 942
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||| | ||||| || || ||||| ||||| ||||| || | ||| || | | ||
Sbjct 1625 AGCACTAAGTGCAAGGTTGATTCCTTCTGAATATTATAATCTGACAGTGTACGTCCATCT 1566
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
||||||||||| || ||| |||| || ||||| ||||| || | ||||| |||||
Sbjct 1565 TCCAGCTGTTTTCCTGCAAAAATTAGCCTCTGTTGGTCAGGAGGGATACCTTCTTTGTCT 1506
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
|| ||| || || | | | |||||| | || ||||| || |||||
Sbjct 1505 TGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCTACTTCCAATGTGATGGTT 1446
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
||||| || || || || ||||| |||||||||
Sbjct 1445 TTGCCAGTCAATGTCTTTACAAAAATTTGCATT 1413
>seq422991
Length=614
Score = 104 bits (114), Expect = 2e-17
Identities = 164/235 (70%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 20946 TTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCC 21005
|| || || || |||| ||||| | ||| || ||||| |||||||||||||| |||||
Sbjct 14 TTACCTCCGCGAAGCCGAAGCACAAGATGTAATGTGGATTCCTTTTGAATGTTGTAGTCA 73
Query 21006 GCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACG 21065
| || || | | || || |||||||| || ||| | || | || ||||||||
Sbjct 74 GACAATGTACGTCCATCTTCTAGCTGTTTACCAGCAAAGATCAATCGTTGCTGGTCTGGT 133
Query 21066 GGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCC 21125
|| | |||||||| || |||||| ||| || | | | ||||||| || |||
Sbjct 134 GGAATACCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCTATAGTATCAGAGGCTTCC 193
Query 21126 GTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180
|| | ||||||||| || || || | || ||||| || ||||||||| |||
Sbjct 194 ACCTCAAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTGA 248
>seq78338
Length=1389
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| ||||| || | ||| |||| |||| |||||||| || || || || ||||| | |
Sbjct 710 CCTCCTCGGAGACGGAGTACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCAGAC 651
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || | || || ||||| ||||| ||| | || || | || || || ||
Sbjct 650 AGAGTGCGGCCATCTTCAAGCTGCTTGCCTGCAAAGATGAGACGTTGTTGATCTGGAGGA 591
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||| ||||| ||||| ||| || | | | ||||||| ||||| |
Sbjct 590 ATTCCTTCTTTGTCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGATGGCTCAACT 531
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|||| ||| || || ||||| || | |||||||||||||||||||||
Sbjct 530 TCCAAGGTTATTGTTTTGCCAGTAAGTGTTTTGACAAATATTTGCATT 483
Score = 98.7 bits (108), Expect = 8e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| || || || | ||||| | |||| ||| ||||| |||||||| || || || |
Sbjct 484 TTCCACCACGGAGACGAAGCACTAAGTGCAGAGTCGACTCTTTTTGAATATTGTAATCAG 425
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
|| || | | || |||| || || || ||| |||| || | ||| ||||| ||
Sbjct 424 ACAAAGTGCGACCATCTTCCAATTGCTTACCAGCAAAAATGAGACGCTGTTGGTCTGGGG 365
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | ||| ||||| || ||||| ||||| | | | || ||| || ||
Sbjct 364 GGATGCCCTCCTTATCCTGTATCTTAGCCTTCACATTCTCAATTGTGTCAGATGGTTCTA 305
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||||| ||||||||||||||| |||| || |||||||||||||||||
Sbjct 304 CTTCCAGGGTAATGGTCTTGCCTGTTAGGGTCTTGACAAATATTTGCAT 256
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||||||| | | |||| |||||||||||||| || ||||| || ||||| |
Sbjct 938 CCTCCTCGCAGACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 879
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || | | ||||||||||| ||||| || |||| || | || ||||| |||
Sbjct 878 AGAGTACGACCATCCTCCAGCTGCTTGCCAGCGAAAATTAGGCGTTGTTGGTCTGGGGGA 819
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || || ||||| ||||||| ||| || | | | ||| || ||| || |
Sbjct 818 ATACCCTCTTTGTCTTGGATCTTTGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 759
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || || || ||||| || | || || ||||| || |||||
Sbjct 758 TCTAATGTGATAGTTTTGCCTGTGAGTGTCTTTACAAAGATCTGCAT 712
>seq78339
Length=2434
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| ||||| || | ||| |||| || | |||||||| || || || || ||||| | |
Sbjct 2419 CCGCCTCGGAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGAC 2360
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || | || ||||| || ||||| ||| | || || | || ||||| |||
Sbjct 2359 AGAGTGCGGCCATCTTCCAGTTGCTTGCCTGCAAAGATGAGACGTTGTTGGTCAGGGGGG 2300
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || ||||| || ||||| ||||| | | | || ||| || || |
Sbjct 2299 ATACCCTCCTTATCCTGTATCTTAGCCTTCACATTCTCAATTGTGTCAGATGGTTCTACT 2240
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| |||||||||||| || || || ||||||||||||||||||||
Sbjct 2239 TCCAGGGTAATGGTCTTTCCTGTCAATGTTTTGACAAATATTTGCAT 2193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419005842766016
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