Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq19446 132 5e-26 seq78339 120 3e-22 seq78338 114 1e-20 seq26980 105 7e-18 seq36366 104 2e-17 seq26979 96.9 4e-15 seq422991 93.3 4e-14 >seq19446 Length=4212 Score = 132 bits (146), Expect = 5e-26 Identities = 207/296 (70%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 65738 TGGCCGAAGTTGCCCTTGTACGGCTCGCTCCACGCGGTCACGCCCTTTTGCGGCTTCTGC 65797 ||||| |||||||| ||||| |||||| |||| | | || || ||||| || || || Sbjct 1935 TGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCCTTTTTGTGGTTTTTGT 1876 Query 65798 ACGGCCGCCCACGGGTCGTGCACCGCCAGCTTGAAGTCGTCGCGGCCCGCGCACGAGCGC 65857 | || ||||| || ||||| | | | |||||||| || ||||| ||| || ||| Sbjct 1875 AATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGGCCGCTGCAGGACCGC 1816 Query 65858 TGCAGCGCCTCGAAGCTGCCCGCGATGGACTTGAGGCTGTCGTTGATGCCGTCCCCGCCG 65917 ||||| || | || ||||| | || || | |||||| ||||||||||| |||||| Sbjct 1815 TGCAGTGCTTGAAAACTGCCTTCAATCTCTTTTAAGCTGTCATTGATGCCGTCACCGCCG 1756 Query 65918 CACATCGGCACGAAGCCGTACAGCAGATGCGTGAGGTTGGGCACGGGCACCTTGTCGGCG 65977 || || || | |||||||| |||| ||| || || || || | || | || || Sbjct 1755 CAAATTGGAATAAAGCCGTAGAGCAAATGAGTAAGATTAGGTATAGGTATGCGATCCACG 1696 Query 65978 GGAAAGTCGCGCCCGTACACGCCCCACTCGACGAAGTAGGCGGCCACCACCTTGCC 66033 || || | | || |||||||| || ||||||||||| |||| || || || Sbjct 1695 GGGAATTTCCTAGGATAGACGCCCCATTCTACGAAGTAGGCACCCACAACTTTTCC 1640 >seq78339 Length=2434 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA-C 40748 ||||||||||| || || || || || ||||| || || ||| | || || | ||||| | Sbjct 1965 ATGCAAATATTTGTTAAGACCCTAACAGGCAAGACTATAACCCTGGAGGT-GGAGCCATC 2023 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | ||| | |||| || |||| || ||||||||||| ||| | || || Sbjct 2024 TGACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGCATTCCCCCAGATCA 2083 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| || |||| || ||||| || |||| || | ||| || | |||||||| Sbjct 2084 ACAACGTCTTATCTTTGCCGGCAAGCAATTGGAAGATGGGCGTACTTTATCAGACTACAA 2143 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||| |||||| |||| || |||||||| |||| ||| | || || Sbjct 2144 CATCCAAAAGGAGTCCACCCTTCATCTAGTACTGCGTTTGCGAGGTGG 2191 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||||||||| || ||||| | || || || ||||| ||| | || || ||| | | Sbjct 2193 ATGCAAATATTTGTCAAAACATTGACAGGAAAGACCATTACCCTGGAAGTAGAACCATCT 2252 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || || | || || ||||| |||||| | ||||| Sbjct 2253 GACACAATTGAGAATGTGAAGGCTAAGATACAGGATAAGGAGGGTATCCCCCCTGACCAA 2312 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| ||||||| || ||||| || ||||| || | ||||| || |||||||| Sbjct 2313 CAACGTCTCATCTTTGCAGGCAAGCAACTGGAAGATGGCCGCACTCTGTCTGACTACAAT 2372 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||| ||| |||| || || Sbjct 2373 ATCCAGAAAGAGTCCACCCTTCA 2395 Score = 96.9 bits (106), Expect = 4e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||||| ||||| |||||||| |||||||| || | || || ||| | Sbjct 1278 AAAATGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGAACCT 1337 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 |||||| | ||| | || | ||||||| ||||| || ||||| || | || Sbjct 1338 TCCGACACTATCGAAAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 1397 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 || ||||| | || | || || || || |||| |||| ||||| || ||||||| Sbjct 1398 CAACAACGTTTGATTTTTGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCCGACTAC 1457 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||| || || || | || || || | || ||||| Sbjct 1458 AACATTCAAAAAGAATCTACTCTTCACTTGGTATTGCG 1495 >seq78338 Length=1389 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || ||||| || ||||| |||||||| ||||| | || || ||| || | Sbjct 712 ATGCAGATCTTTGTAAAGACACTCACAGGCAAAACTATCACATTAGAAGTTGAACCCTCA 771 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| | || | ||| || | ||||||||||| || ||| | ||||| Sbjct 772 GACACTATTGAAAATGTTAAAGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGACCAA 831 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| || || | ||| ||||| |||||||| || | || || ||| |||||||| Sbjct 832 CAACGCCTAATTTTCGCTGGCAAGCAGCTGGAGGATGGTCGTACTCTCTCTGACTACAAT 891 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 || ||||| ||| |||| |||| Sbjct 892 ATTCAGAAAGAGTCCACTTTGCA 914 Score = 105 bits (116), Expect = 7e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA- 40747 |||||||||||| || ||||| || || |||||||| || ||| | || || | ||||| Sbjct 483 AATGCAAATATTTGTCAAAACACTTACTGGCAAAACAATAACCTTGGAAGTTG-AGCCAT 541 Query 40748 CCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 | || | | ||| | || | || |||| |||||||| || || || | || | Sbjct 542 CTGATACTATTGAAAATGTTAAAGCTAAGATTCAAGACAAAGAAGGAATTCCTCCAGATC 601 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 | ||||| ||||||| || ||||| ||||| || || | ||||| || ||||||| Sbjct 602 AACAACGTCTCATCTTTGCAGGCAAGCAGCTTGAAGATGGCCGCACTCTGTCTGACTACA 661 Query 40868 ACATCCAGAAGGAGGCCACGCTGCA 40892 | |||||||| ||| |||| ||||| Sbjct 662 ATATCCAGAAAGAGTCCACCCTGCA 686 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA-C 40748 ||||| || || || || || || || || || |||||||| | || || || |||| | Sbjct 940 ATGCAGATCTTTGTTAAGACACTTACTGGGAAGACCATCACATTGGAAGTGGA-GCCATC 998 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||||| | | ||| | |||| || || | ||||| |||||||| ||| | ||||| Sbjct 999 CGACACCATCGAAAATGTTAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCA 1058 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || |||| || || |||||| |||| || | ||||| || |||||||| Sbjct 1059 ACAGCGTCTTATCTTTGCTGGTAAACAGTTGGAGGATGGCCGCACTCTGTCGGACTACAA 1118 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||| || || | || ||||| |||| Sbjct 1119 CATCCAAAAAGAATCTACTTTGCATTTAGT 1148 >seq26980 Length=2195 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || ||||| || | || |||||||||||||| | || || ||||| | Sbjct 1413 AATGCAAATTTTTGTAAAGACATTGACTGGCAAAACCATCACATTGGAAGTAGAAGCTTC 1472 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | ||| | |||| |||||||| |||||||| || ||||| | ||||| Sbjct 1473 TGATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGTATCCCTCCTGACCA 1532 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || | || || | || || ||||||||||| || | || || || || || || Sbjct 1533 ACAGAGGCTAATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACACTGTCAGATTATAA 1592 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 || |||||||| | || |||| ||||| ||||| | ||||| || Sbjct 1593 TATTCAGAAGGAATCAACCTTGCACTTAGTGCTGCGCCTTAGGGGTGG 1640 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||||||||| | || || ||||||||||| | || || ||||| | Sbjct 958 ATGCAAATTTTCGTAAAAACCTTAACTGGGAAAACCATCACATTGGAAGTAGAAGCTTCT 1017 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| | |||| ||| |||| ||||| || ||||| || | || || Sbjct 1018 GATACAATCGAGAACG-TGAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCA 1076 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || |||| || | ||| || || || ||||| || | ||| || || ||||| || Sbjct 1077 ACAGAGACTAATTTTCGCCGGAAAGCAACTGGAAGATGGGCGGACACTATCGGACTATAA 1136 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||| | || |||| ||||| |||| | ||||| || Sbjct 1137 TATCCAGAAGGAATCTACTTTGCACTTAGTGCTGCGTCTCAGGGGTGG 1184 >seq36366 Length=4232 Score = 104 bits (114), Expect = 2e-17 Identities = 159/224 (71%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 116945 TTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGC 117004 || || || || || ||||| | ||||| || || ||||||| || ||||| | | Sbjct 2578 TTATTTAATGCAATTGAGACTCTACCGTGTGTAAAGAAGAAGGCAGACTGGGCATTACAG 2519 Query 117005 TGGATCGCCGGCAGAGAG-GCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGA 117063 ||||||| | ||| ||| || | || || || || | | || || ||||| || || Sbjct 2518 TGGATCGGCAGCA-AGACTGCTACATTTGGAGAACGTATTATTGCTTTTGCGGCAGTTGA 2460 Query 117064 GGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCAT 117123 || | || || || ||||| || || | ||||||||| | || ||||| || || || Sbjct 2459 AGGAATATTTTTCTCAGGCAGCTTTGCTTCAATATTTTGGTTGAAAAAACGTGGTCTGAT 2400 Query 117124 GCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 |||||| ||||||||||||| || || || || ||||| |||| Sbjct 2399 GCCCGGATTGACTTTCAGCAATGAACTTATTTCTAGGGATGAGG 2356 >seq26979 Length=899 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || || ||||| || || |||||||| ||||| | || || ||||| | Sbjct 306 AATGCAAATTTTTGTTAAAACACTGACAGGCAAAACAATCACATTAGAAGTGGAAGCTTC 365 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | ||| | |||| |||||||| || || || || || || | || || Sbjct 366 TGATACAATAGAAAATGTTAAGGCAAAAATTCAGGATAAGGAAGGTATTCCTCCAGATCA 425 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || || | ||| ||||||||||| || || | ||||| || ||||| || Sbjct 426 ACAAAGGCTGATTTTCGCTGGCAAACAGCTAGAAGATGGACGCACTCTGTCTGACTATAA 485 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 || || ||||| | || ||||| |||| |||| | ||||| || Sbjct 486 TATTCAAAAGGAATCTACACTGCACTTAGTCCTGCGTCTAAGGGGTGG 533 >seq422991 Length=614 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| ||||| || || || ||||| |||||||| ||| | || || |||||| | Sbjct 244 AATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTTGAGGTGGAAGCCTC 185 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | ||| | || | || || | || || || || || || | ||||| Sbjct 184 TGATACTATAGAAAATGTAAAAGCTAAGATCCAAGATAAGGAAGGTATTCCACCAGACCA 125 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||||| | |||| || || |||||||| || || | || || | |||||||| Sbjct 124 GCAACGATTGATCTTTGCTGGTAAACAGCTAGAAGATGGACGTACATTGTCTGACTACAA 65 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||| || ||||| |||| | ||||| ||| Sbjct 64 CATTCAAAAGGAATCCACATTACATCTTGTG 34 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511147834837760