Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27]
632,176 sequences; 365,010,054 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq19446 168 6e-37
seq26979 120 3e-22
seq78339 118 9e-22
seq78338 116 3e-21
seq26980 96.9 3e-15
seq422991 84.2 2e-11
seq26981 84.2 2e-11
>seq19446
Length=4212
Score = 168 bits (186), Expect = 6e-37
Identities = 346/508 (68%), Gaps = 10/508 (2%)
Strand=Plus/Plus
Query 21569 AAAATCGTGGCGGCCTACTTTGTCGAATGGGGAGTGTACCTGAGACAGTTCCCCGTCGAC 21628
||| | |||| |||||||| || |||||||| || || | || | |||||||| ||
Sbjct 1643 AAAGTTGTGGGTGCCTACTTCGTAGAATGGGGCGTCTATCCTAGGAAATTCCCCGTGGAT 1702
Query 21629 AAGGTGCCGGCGCCGAATCTATCACATATACTATACGGCTTCGTGCCGATATGCGGAGGC 21688
| || || ||||| | ||| | || |||||||| | || || ||||| ||
Sbjct 1703 CGCATACCTATACCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGT 1762
Query 21689 GACGGCATCAACGACGCGCTAAAAACGGTGCCTGGCAGTTTTGAGGCATTGCAACGTTCG 21748
||||||||||| ||| ||||| | | ||||||||| | ||| |||| || ||
Sbjct 1763 GACGGCATCAATGACAGCTTAAAAGAGATTGAAGGCAGTTTTCAAGCACTGCAGCGGTCC 1822
Query 21749 TGTGCGGGTCGGGCCGATTTCAAGGTGGCTATACACGATCCGTGGGCCGCAATACAAAAG 21808
|| || || | || ||||| || | || |||||||| ||||| ||| |||||||
Sbjct 1823 TGCAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAA 1882
Query 21809 CCCCAAAAGGGCGTCTCGTCATGGAACGAACCGTACAAAGGCAACTTTGGTCAACTGATG 21868
|| ||||| || | || ||||||||||| || ||||||||||||||||| ||| | |||
Sbjct 1883 CCACAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATG 1942
Query 21869 GCAATGAAGAGGGCCAATCCTCACATTAAAG--TGTTCGCATCGATCGGCGGATGGACTC 21926
|| | || || ||| | ||||||| | ||| | || || || || ||||| |
Sbjct 1943 TCATTAAAACAAGCTCGCCCTGA-ATTAAAGATTCTTC-CCTCTATTGGTGGGTGGACGC 2000
Query 21927 TGTCCGATCCATT-TTATCATATG--CACGACGCCGACGTCAGACGGGTGTTTATCGATT 21983
| | ||||| || || | | || || | | | | ||| ||| | | |
Sbjct 2001 TTGCTGATCCTTTCTTCTTTTTTGTTGACAAATCTAAGAGAACACG---ATTTGTGCAGT 2057
Query 21984 CAGTTGAAGAATTTCTGCTCACGTGGAAGTTCTATGACGGCGTCCACATCGATTGGGAGT 22043
|||| | || || || || || ||||| |||| || || || | |||||||||||||
Sbjct 2058 CAGTAAAGGAGTTCCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGT 2117
Query 22044 TTCCCGGCGGCAAGGGAGCCAACCCCGA 22071
| || || ||||| || || ||||| ||
Sbjct 2118 TCCCTGGTGGCAAAGGTGCTAACCCTGA 2145
>seq26979
Length=899
Score = 120 bits (132), Expect = 3e-22
Identities = 159/216 (74%), Gaps = 6/216 (3%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--A 118583
|||||| ||||| | ||||| || ||||| || || ||||| | | |||| |||| |
Sbjct 291 CAACACTAAGTGCAAAGTAGATTCCTTTTGGATATTATAATC--TGACAGTGTGCGTCCA 234
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643
|| || || || ||||||||| | || || | || ||||| ||||| ||||| ||||||
Sbjct 233 TCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTG 174
Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGT-GCTCTCGACCTCGACGGTCAC 118702
||| ||| ||| ||||| | ||| | || || | ||| || || || | || |
Sbjct 173 TCTTGAATCTTTGCCTTAACATTTTCAATTGTATCAGAAGCT-TCCACTTCTAAAGTAAT 115
Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| || ||||| |||||||||||||| |||||
Sbjct 114 CGTTTTTCCAGTCAGTGTTTTTACAAAAATTTGCAT 79
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | ||||| ||||||||||| ||||| || || |||||| ||| ||
Sbjct 743 ACCAAGTGCAAGGTAGATTCTTTTTGAATATTGTAGTCTGACAAAGTGCGTCCATCTTCA 684
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|| ||||| ||||| | || || | ||| || || || || || |||||||| ||| |
Sbjct 683 AGTTGTTTCCCAGCAAAAATAAGCCTCTGTTGGTCTGGGGGAATCCCCTCCTTATCTTGA 624
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|||||| |||||| | ||| | ||||| | ||| || || | ||| | || |||
Sbjct 623 ATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAACTTCAAGGGTAATAGTCTTG 564
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || ||||| |||||||| |||||
Sbjct 563 CCAGTAAGTGTTTTAACAAAAATTTGCAT 535
>seq78339
Length=2434
Score = 118 bits (130), Expect = 9e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
||| |||||||| | ||||| ||||||||||||||||| ||| | |||||| ||
Sbjct 1493 CAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCGTC 1434
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| | || |||||||| | || | ||| || ||||| ||||| ||||| ||||||||
Sbjct 1433 TTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTC 1374
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
| |||||| ||| || | ||||| ||||| | || || || | || | ||
Sbjct 1373 TTGAATTTTCGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGT 1314
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| || || || ||||| || |||||||||||
Sbjct 1313 TTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 1281
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
||||| || | ||| || ||||||||||| ||||| || || ||||| ||| ||
Sbjct 1945 ACCAAATGAAGTGTCGATTCTTTTTGAATATTGTAGTCAGACAGGGTGCGACCATCTTCC 1886
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
| || || || ||| | || ||||| || ||||| ||||| ||||| || ||||||
Sbjct 1885 AATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGG 1826
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
||||| || || | ||| | ||||| | | || || || | || | |||||
Sbjct 1825 ATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAACGTAATAGTTTTT 1766
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || ||||| ||||| || |||||
Sbjct 1765 CCAGTGAGTGTTTTAACAAAGATTTGCAT 1737
>seq78338
Length=1389
Score = 116 bits (128), Expect = 3e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
||||| |||||||| |||||||| || || |||||| |||||| | |||||| |||
Sbjct 1136 GTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAACTGTTTACCA 1077
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| |||||||| || || || || ||||||||||||||| || || |||
Sbjct 1076 GCAAAGATAAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTA 1017
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | ||||| |||||| | ||| || || | || | || || || || || ||
Sbjct 1016 ACATTTTCGATGGTGTCGGATGGCTCCACTTCCAATGTGATGGTCTTCCCAGTAAGTGTC 957
Query 118722 TTTACAAAAATCTGCAT 118738
|| ||||| ||||||||
Sbjct 956 TTAACAAAGATCTGCAT 940
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
||||||| || | | || ||||| || | ||| || ||||||||||| ||||| ||
Sbjct 256 TACCTCCTCGCAGACGCAGTACCAAATGAAGTGTGGATTCTTTTTGAATATTGTAGTCAG 197
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||||| ||| || | || || || ||| | || ||||| || ||||| || |
Sbjct 196 ACAGGGTGCGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCAGGTG 137
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| ||||| || |||||| ||||| ||| || | ||| | ||||| | | ||| |
Sbjct 136 GGATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTGTCAGAGGGCTCCA 77
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || | ||| | || || || || || ||||| ||||||||||||||
Sbjct 76 CTTCCAGGGTAATAGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 28
Score = 93.3 bits (102), Expect = 4e-14
Identities = 151/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||| ||||| | || |||||||||||||| |||||||| || |||||| ||| ||
Sbjct 465 CACTAAGTGCAGAGTCGACTCTTTTTGAATATTGTAATCAGACAAAGTGCGACCATCTTC 406
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTG 118647
| || || ||||| | ||||||||||| || || || || ||||||||||| | |||
Sbjct 405 CAATTGCTTACCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTG 346
Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTT 118706
| || || || || | || | ||||| | || | || || || | ||| | ||
Sbjct 345 T-ATCTTAGCCTTCACATTCTCAATTGTGTCAGATGGT-TCTACTTCCAGGGTAATGGTC 288
Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| || || || || ||||| || |||||
Sbjct 287 TTGCCTGTTAGGGTCTTGACAAATATTTGCAT 256
>seq26980
Length=2195
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/211 (71%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCT 118587
||||| || | ||||| ||||| ||||| ||||| || | | |||| |||| ||| |
Sbjct 1850 ACCAAATGTAAGGTAGATTCTTTCTGAATATTGTAGTC--TGACAGTGTGCGTCCATCTT 1793
Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647
| || || |||||||| | || || | |||||||| || || || |||||||| ||
Sbjct 1792 CAAGTTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATACCCTCCTTATCCT 1733
Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707
||| || |||||| | ||| | || || | ||| || || | || | ||||
Sbjct 1732 GAATCTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACTTCCAGTGTGATAGTTT 1673
Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| || || || ||||||||||| |||||
Sbjct 1672 TGCCAGTTAGTGTCTTTACAAAAATTTGCAT 1642
Score = 93.3 bits (102), Expect = 4e-14
Identities = 153/216 (71%), Gaps = 6/216 (3%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--A 118583
|| ||| ||||| | || || || || ||||| || ||||| | | |||| ||| |
Sbjct 1626 CAGCACTAAGTGCAAGGTTGATTCCTTCTGAATATTATAATC--TGACAGTGTACGTCCA 1569
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643
|| || ||||||||||| || | || || | ||| || || ||||| || || || |||
Sbjct 1568 TCTTCCAGCTGTTTTCCTGCAAAAATTAGCCTCTGTTGGTCAGGAGGGATACCTTCTTTG 1509
Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGT-GCTCTCGACCTCGACGGTCAC 118702
||| ||||||| ||||| | ||| | || || | ||| || || || | || |
Sbjct 1508 TCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCT-TCTACTTCCAATGTGAT 1450
Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||||| |||| || ||||||||||| |||||
Sbjct 1449 GGTTTTGCCAGTCAATGTCTTTACAAAAATTTGCAT 1414
>seq422991
Length=614
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||||||||| | | | ||| | || | ||| || || |||||||||||||| ||
Sbjct 15 TACCTCCGCGAAGCCGAAGCACAAGATGTAATGTGGATTCCTTTTGAATGTTGTAGTCAG 74
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || || ||| || |||||||| ||||| |||| | || ||||| || || |
Sbjct 75 ACAATGTACGTCCATCTTCTAGCTGTTTACCAGCAAAGATCAATCGTTGCTGGTCTGGTG 134
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || ||||| ||| || || ||| || | ||| | || || | | || |
Sbjct 135 GAATACCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCTATAGTATCAGAGGCTTCCA 194
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | ||||| || || || || || || ||||| |||||
Sbjct 195 CCTCAAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 243
>seq26981
Length=233
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/199 (70%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCTCGAGCTGTTTTC 118599
||||| ||||||||||| ||||| | | | |||| ||| ||| || | || || |
Sbjct 206 GTAGATTCTTTTTGAATATTGTAGT--CAGAAAGTGTACGTCCATCTTCCAATTGCTTGC 149
Query 118600 CAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTT 118659
| ||| | || ||||| || ||||| ||||| ||||| || |||||| |||||| |
Sbjct 148 CCGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGAATTTTAGCCT 89
Query 118660 TAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAG 118719
| || | ||| | ||||| | | || || || | || | ||||| || || || |
Sbjct 88 TTACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAATGTAATTGTTTTTCCAGTAAGTG 29
Query 118720 TTTTTACAAAAATCTGCAT 118738
|||| ||||| || |||||
Sbjct 28 TTTTGACAAAGATTTGCAT 10
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430487890777792
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