Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq19446 168 6e-37 seq26979 120 3e-22 seq78339 118 9e-22 seq78338 116 3e-21 seq26980 96.9 3e-15 seq422991 84.2 2e-11 seq26981 84.2 2e-11 >seq19446 Length=4212 Score = 168 bits (186), Expect = 6e-37 Identities = 346/508 (68%), Gaps = 10/508 (2%) Strand=Plus/Plus Query 21569 AAAATCGTGGCGGCCTACTTTGTCGAATGGGGAGTGTACCTGAGACAGTTCCCCGTCGAC 21628 ||| | |||| |||||||| || |||||||| || || | || | |||||||| || Sbjct 1643 AAAGTTGTGGGTGCCTACTTCGTAGAATGGGGCGTCTATCCTAGGAAATTCCCCGTGGAT 1702 Query 21629 AAGGTGCCGGCGCCGAATCTATCACATATACTATACGGCTTCGTGCCGATATGCGGAGGC 21688 | || || ||||| | ||| | || |||||||| | || || ||||| || Sbjct 1703 CGCATACCTATACCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGT 1762 Query 21689 GACGGCATCAACGACGCGCTAAAAACGGTGCCTGGCAGTTTTGAGGCATTGCAACGTTCG 21748 ||||||||||| ||| ||||| | | ||||||||| | ||| |||| || || Sbjct 1763 GACGGCATCAATGACAGCTTAAAAGAGATTGAAGGCAGTTTTCAAGCACTGCAGCGGTCC 1822 Query 21749 TGTGCGGGTCGGGCCGATTTCAAGGTGGCTATACACGATCCGTGGGCCGCAATACAAAAG 21808 || || || | || ||||| || | || |||||||| ||||| ||| ||||||| Sbjct 1823 TGCAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAA 1882 Query 21809 CCCCAAAAGGGCGTCTCGTCATGGAACGAACCGTACAAAGGCAACTTTGGTCAACTGATG 21868 || ||||| || | || ||||||||||| || ||||||||||||||||| ||| | ||| Sbjct 1883 CCACAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATG 1942 Query 21869 GCAATGAAGAGGGCCAATCCTCACATTAAAG--TGTTCGCATCGATCGGCGGATGGACTC 21926 || | || || ||| | ||||||| | ||| | || || || || ||||| | Sbjct 1943 TCATTAAAACAAGCTCGCCCTGA-ATTAAAGATTCTTC-CCTCTATTGGTGGGTGGACGC 2000 Query 21927 TGTCCGATCCATT-TTATCATATG--CACGACGCCGACGTCAGACGGGTGTTTATCGATT 21983 | | ||||| || || | | || || | | | | ||| ||| | | | Sbjct 2001 TTGCTGATCCTTTCTTCTTTTTTGTTGACAAATCTAAGAGAACACG---ATTTGTGCAGT 2057 Query 21984 CAGTTGAAGAATTTCTGCTCACGTGGAAGTTCTATGACGGCGTCCACATCGATTGGGAGT 22043 |||| | || || || || || ||||| |||| || || || | ||||||||||||| Sbjct 2058 CAGTAAAGGAGTTCCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGT 2117 Query 22044 TTCCCGGCGGCAAGGGAGCCAACCCCGA 22071 | || || ||||| || || ||||| || Sbjct 2118 TCCCTGGTGGCAAAGGTGCTAACCCTGA 2145 >seq26979 Length=899 Score = 120 bits (132), Expect = 3e-22 Identities = 159/216 (74%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--A 118583 |||||| ||||| | ||||| || ||||| || || ||||| | | |||| |||| | Sbjct 291 CAACACTAAGTGCAAAGTAGATTCCTTTTGGATATTATAATC--TGACAGTGTGCGTCCA 234 Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 || || || || ||||||||| | || || | || ||||| ||||| ||||| |||||| Sbjct 233 TCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTG 174 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGT-GCTCTCGACCTCGACGGTCAC 118702 ||| ||| ||| ||||| | ||| | || || | ||| || || || | || | Sbjct 173 TCTTGAATCTTTGCCTTAACATTTTCAATTGTATCAGAAGCT-TCCACTTCTAAAGTAAT 115 Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || ||||| |||||||||||||| ||||| Sbjct 114 CGTTTTTCCAGTCAGTGTTTTTACAAAAATTTGCAT 79 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | ||||| ||||||||||| ||||| || || |||||| ||| || Sbjct 743 ACCAAGTGCAAGGTAGATTCTTTTTGAATATTGTAGTCTGACAAAGTGCGTCCATCTTCA 684 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || ||||| ||||| | || || | ||| || || || || || |||||||| ||| | Sbjct 683 AGTTGTTTCCCAGCAAAAATAAGCCTCTGTTGGTCTGGGGGAATCCCCTCCTTATCTTGA 624 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 |||||| |||||| | ||| | ||||| | ||| || || | ||| | || ||| Sbjct 623 ATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAACTTCAAGGGTAATAGTCTTG 564 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || ||||| |||||||| ||||| Sbjct 563 CCAGTAAGTGTTTTAACAAAAATTTGCAT 535 >seq78339 Length=2434 Score = 118 bits (130), Expect = 9e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 ||| |||||||| | ||||| ||||||||||||||||| ||| | |||||| || Sbjct 1493 CAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCGTC 1434 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || | || |||||||| | || | ||| || ||||| ||||| ||||| |||||||| Sbjct 1433 TTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTC 1374 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | |||||| ||| || | ||||| ||||| | || || || | || | || Sbjct 1373 TTGAATTTTCGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGT 1314 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| || || || ||||| || ||||||||||| Sbjct 1313 TTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 1281 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | ||| || ||||||||||| ||||| || || ||||| ||| || Sbjct 1945 ACCAAATGAAGTGTCGATTCTTTTTGAATATTGTAGTCAGACAGGGTGCGACCATCTTCC 1886 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | || || || ||| | || ||||| || ||||| ||||| ||||| || |||||| Sbjct 1885 AATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGG 1826 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 ||||| || || | ||| | ||||| | | || || || | || | ||||| Sbjct 1825 ATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAACGTAATAGTTTTT 1766 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || ||||| ||||| || ||||| Sbjct 1765 CCAGTGAGTGTTTTAACAAAGATTTGCAT 1737 >seq78338 Length=1389 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 ||||| |||||||| |||||||| || || |||||| |||||| | |||||| ||| Sbjct 1136 GTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAACTGTTTACCA 1077 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| |||||||| || || || || ||||||||||||||| || || ||| Sbjct 1076 GCAAAGATAAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTA 1017 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | ||||| |||||| | ||| || || | || | || || || || || || Sbjct 1016 ACATTTTCGATGGTGTCGGATGGCTCCACTTCCAATGTGATGGTCTTCCCAGTAAGTGTC 957 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 956 TTAACAAAGATCTGCAT 940 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| || | | || ||||| || | ||| || ||||||||||| ||||| || Sbjct 256 TACCTCCTCGCAGACGCAGTACCAAATGAAGTGTGGATTCTTTTTGAATATTGTAGTCAG 197 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||||| ||| || | || || || ||| | || ||||| || ||||| || | Sbjct 196 ACAGGGTGCGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCAGGTG 137 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||| || |||||| ||||| ||| || | ||| | ||||| | | ||| | Sbjct 136 GGATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTGTCAGAGGGCTCCA 77 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | ||| | || || || || || ||||| |||||||||||||| Sbjct 76 CTTCCAGGGTAATAGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 28 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| ||||| | || |||||||||||||| |||||||| || |||||| ||| || Sbjct 465 CACTAAGTGCAGAGTCGACTCTTTTTGAATATTGTAATCAGACAAAGTGCGACCATCTTC 406 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTG 118647 | || || ||||| | ||||||||||| || || || || ||||||||||| | ||| Sbjct 405 CAATTGCTTACCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTG 346 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTT 118706 | || || || || | || | ||||| | || | || || || | ||| | || Sbjct 345 T-ATCTTAGCCTTCACATTCTCAATTGTGTCAGATGGT-TCTACTTCCAGGGTAATGGTC 288 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || || || ||||| || ||||| Sbjct 287 TTGCCTGTTAGGGTCTTGACAAATATTTGCAT 256 >seq26980 Length=2195 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCT 118587 ||||| || | ||||| ||||| ||||| ||||| || | | |||| |||| ||| | Sbjct 1850 ACCAAATGTAAGGTAGATTCTTTCTGAATATTGTAGTC--TGACAGTGTGCGTCCATCTT 1793 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 | || || |||||||| | || || | |||||||| || || || |||||||| || Sbjct 1792 CAAGTTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATACCCTCCTTATCCT 1733 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 ||| || |||||| | ||| | || || | ||| || || | || | |||| Sbjct 1732 GAATCTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACTTCCAGTGTGATAGTTT 1673 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || || || ||||||||||| ||||| Sbjct 1672 TGCCAGTTAGTGTCTTTACAAAAATTTGCAT 1642 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--A 118583 || ||| ||||| | || || || || ||||| || ||||| | | |||| ||| | Sbjct 1626 CAGCACTAAGTGCAAGGTTGATTCCTTCTGAATATTATAATC--TGACAGTGTACGTCCA 1569 Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 || || ||||||||||| || | || || | ||| || || ||||| || || || ||| Sbjct 1568 TCTTCCAGCTGTTTTCCTGCAAAAATTAGCCTCTGTTGGTCAGGAGGGATACCTTCTTTG 1509 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGT-GCTCTCGACCTCGACGGTCAC 118702 ||| ||||||| ||||| | ||| | || || | ||| || || || | || | Sbjct 1508 TCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCT-TCTACTTCCAATGTGAT 1450 Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||||| |||| || ||||||||||| ||||| Sbjct 1449 GGTTTTGCCAGTCAATGTCTTTACAAAAATTTGCAT 1414 >seq422991 Length=614 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||||||||| | | | ||| | || | ||| || || |||||||||||||| || Sbjct 15 TACCTCCGCGAAGCCGAAGCACAAGATGTAATGTGGATTCCTTTTGAATGTTGTAGTCAG 74 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || || ||| || |||||||| ||||| |||| | || ||||| || || | Sbjct 75 ACAATGTACGTCCATCTTCTAGCTGTTTACCAGCAAAGATCAATCGTTGCTGGTCTGGTG 134 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||| ||| || || ||| || | ||| | || || | | || | Sbjct 135 GAATACCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCTATAGTATCAGAGGCTTCCA 194 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | ||| | ||||| || || || || || || ||||| ||||| Sbjct 195 CCTCAAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 243 >seq26981 Length=233 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCTCGAGCTGTTTTC 118599 ||||| ||||||||||| ||||| | | | |||| ||| ||| || | || || | Sbjct 206 GTAGATTCTTTTTGAATATTGTAGT--CAGAAAGTGTACGTCCATCTTCCAATTGCTTGC 149 Query 118600 CAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTT 118659 | ||| | || ||||| || ||||| ||||| ||||| || |||||| |||||| | Sbjct 148 CCGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGAATTTTAGCCT 89 Query 118660 TAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAG 118719 | || | ||| | ||||| | | || || || | || | ||||| || || || | Sbjct 88 TTACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAATGTAATTGTTTTTCCAGTAAGTG 29 Query 118720 TTTTTACAAAAATCTGCAT 118738 |||| ||||| || ||||| Sbjct 28 TTTTGACAAAGATTTGCAT 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430487890777792