Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq78338 107 1e-18 seq78339 104 1e-17 seq26980 86.0 4e-12 seq78340 82.4 5e-11 >seq78338 Length=1389 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | | |||| ||| ||||| |||||||| || |||||||| || Sbjct 938 CCTCCTCGCAGACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 879 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| ||||||||| |||||||| || || || ||||| ||| Sbjct 878 AGAGTACGACCATCCTCCAGCTGCTTGCCAGCGAAAATTAGGCGTTGTTGGTCTGGGGGA 819 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAG-ATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||| ||||| |||||| |||||| || | || | || | | ||| || Sbjct 818 ATACCCTCTTTGTCTTGGATCTTT-GCTTTAACATTTTCAATAGTGTCTGAGGGTTCAAC 760 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| |||||||| ||||| || || |||||||||||||| Sbjct 759 TTCTAATGTGATAGTTTTGCCTGTGAGTGTCTTTACAAAGATCTGCAT 712 Score = 105 bits (116), Expect = 4e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 34187 TGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGC 34246 || |||||| |||||| || ||||||||||| ||||| ||| | || |||||||| Sbjct 1142 TGCAAAGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAACTGT 1083 Query 34247 TTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTT 34306 || || || || || || ||||| ||||| ||| | || ||||||||| ||||| Sbjct 1082 TTACCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTA 1023 Query 34307 TGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTG 34366 ||| | || | || | |||| | || || |||| |||||||| || || || Sbjct 1022 GCCTTAACATTTTCGATGGTGTCGGATGGCTCCACTTCCAATGTGATGGTCTTCCCAGTA 963 Query 34367 AGAGTTTTCACAAAGATCTGCAT 34389 || || || |||||||||||||| Sbjct 962 AGTGTCTTAACAAAGATCTGCAT 940 >seq78339 Length=2434 Score = 104 bits (114), Expect = 1e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | || |||| ||| | |||| |||||| || |||||||||||||| Sbjct 1508 TCCACCACGGAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGA 1449 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || ||| |||| ||||| ||||| || || ||||| | || || || || || Sbjct 1448 AAGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGG 1389 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGC-TTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | || |||||||| || ||| || |||| || | || | |||| | ||| | Sbjct 1388 AATGCCTTCCTTGTCTTGAAT-TTTCGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAA 1330 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| || |||||||| || ||||| |||||||| || |||||||| Sbjct 1329 CTTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 1281 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || || | |||| |||| ||| || || || || || || || Sbjct 1735 CCGCCACGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGAT 1676 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | |||| | || ||||| ||||| || || |||||||||| ||| ||||| ||| Sbjct 1675 AATGTACGGCCATCTTCCAATTGCTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGA 1616 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | || ||||| |||||| ||| | | | || | || | | || || Sbjct 1615 ATACCTTCTTTGTCTTGGATCTTTGCCTTCACGTTTTCAATTGTGTCAGAAGGCTCTACT 1556 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||||||| || || ||||| || |||||||||||||| Sbjct 1555 TCTAACGTGATGGTTTTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 1509 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || |||| ||| | || |||||||| || |||||||| ||| Sbjct 2419 CCGCCTCGGAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGAC 2360 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| ||||||||||| || ||||| || || ||||| ||| Sbjct 2359 AGAGTGCGGCCATCTTCCAGTTGCTTGCCTGCAAAGATGAGACGTTGTTGGTCAGGGGGG 2300 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||| || |||||| ||| | || | || | || | | ||| || Sbjct 2299 ATACCCTCCTTATCCTGTATCTTAGCCTTCACATTCTCAATTGTGTCAGATGGTTCTACT 2240 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || ||||| || || || | ||||| ||||| || ||||| Sbjct 2239 TCCAGGGTAATGGTCTTTCCTGTCAATGTTTTGACAAATATTTGCAT 2193 >seq26980 Length=2195 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236 |||||| | ||| || || ||| ||||| || || || || ||||| ||| | || Sbjct 1626 CAGCACTAAGTGCAAGGTTGATTCCTTCTGAATATTATAATCTGACAGTGTACGTCCATC 1567 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCTTG 34294 |||| ||| || ||||| ||||| |||| ||| ||||| || || || ||| ||| Sbjct 1566 TTCCAGCTGTTTTCCTGCAAAAATTAGCCTCTGTTGGTCAGGAGGGATACCTTCT--TTG 1509 Query 34295 TCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATG 34354 || || ||| ||| | || |||| | ||| | | ||| || |||| |||||| Sbjct 1508 TCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCTACTTCCAATGTGATG 1449 Query 34355 GTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| || | || || ||||| || ||||| Sbjct 1448 GTTTTGCCAGTCAATGTCTTTACAAAAATTTGCAT 1414 >seq78340 Length=230 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 34187 TGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGC 34246 ||||||||| |||||| || || |||||||| || || ||| | || ||||| ||| Sbjct 209 TGTAAAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGTGTACGACCATCTTCCAATTGC 150 Query 34247 TTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTT 34306 |||||||||||||| || || || || || || | || || || || || || Sbjct 149 TTGCCTGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTATCTTGAATTTTA 90 Query 34307 TGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTG 34366 ||||| || | || | || | | ||| || || | || || ||||| || || Sbjct 89 GCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAATGTAATTGTTTTTCCAGTA 30 Query 34367 AGAGTTTTCACAAAGATCTGCAT 34389 || ||||| |||||||| ||||| Sbjct 29 AGTGTTTTAACAAAGATTTGCAT 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 320582844930560