Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27]
632,176 sequences; 365,010,054 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq78338 107 1e-18
seq78339 104 1e-17
seq26980 86.0 4e-12
seq78340 82.4 5e-11
>seq78338
Length=1389
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | | |||| ||| ||||| |||||||| || |||||||| ||
Sbjct 938 CCTCCTCGCAGACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 879
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || |||| ||||||||| |||||||| || || || ||||| |||
Sbjct 878 AGAGTACGACCATCCTCCAGCTGCTTGCCAGCGAAAATTAGGCGTTGTTGGTCTGGGGGA 819
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAG-ATCGGCTATCGAATCGGTCGATTCGAC 34341
| | ||| ||||| |||||| |||||| || | || | || | | ||| ||
Sbjct 818 ATACCCTCTTTGTCTTGGATCTTT-GCTTTAACATTTTCAATAGTGTCTGAGGGTTCAAC 760
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||||| |||||||| ||||| || || ||||||||||||||
Sbjct 759 TTCTAATGTGATAGTTTTGCCTGTGAGTGTCTTTACAAAGATCTGCAT 712
Score = 105 bits (116), Expect = 4e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 34187 TGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGC 34246
|| |||||| |||||| || ||||||||||| ||||| ||| | || ||||||||
Sbjct 1142 TGCAAAGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAACTGT 1083
Query 34247 TTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTT 34306
|| || || || || || ||||| ||||| ||| | || ||||||||| |||||
Sbjct 1082 TTACCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTA 1023
Query 34307 TGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTG 34366
||| | || | || | |||| | || || |||| |||||||| || || ||
Sbjct 1022 GCCTTAACATTTTCGATGGTGTCGGATGGCTCCACTTCCAATGTGATGGTCTTCCCAGTA 963
Query 34367 AGAGTTTTCACAAAGATCTGCAT 34389
|| || || ||||||||||||||
Sbjct 962 AGTGTCTTAACAAAGATCTGCAT 940
>seq78339
Length=2434
Score = 104 bits (114), Expect = 1e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || || || | || |||| ||| | |||| |||||| || ||||||||||||||
Sbjct 1508 TCCACCACGGAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGA 1449
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| ||| |||| ||||| ||||| || || ||||| | || || || || ||
Sbjct 1448 AAGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGG 1389
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGC-TTTAGATCGGCTATCGAATCGGTCGATTCGA 34340
| || |||||||| || ||| || |||| || | || | |||| | ||| |
Sbjct 1388 AATGCCTTCCTTGTCTTGAAT-TTTCGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAA 1330
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| |||| || |||||||| || ||||| |||||||| || ||||||||
Sbjct 1329 CTTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 1281
Score = 86.0 bits (94), Expect = 4e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| || || | || || | |||| |||| ||| || || || || || || ||
Sbjct 1735 CCGCCACGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGAT 1676
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
| |||| | || ||||| ||||| || || |||||||||| ||| ||||| |||
Sbjct 1675 AATGTACGGCCATCTTCCAATTGCTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGA 1616
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | || ||||| |||||| ||| | | | || | || | | || ||
Sbjct 1615 ATACCTTCTTTGTCTTGGATCTTTGCCTTCACGTTTTCAATTGTGTCAGAAGGCTCTACT 1556
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | |||||||||||| || || ||||| || ||||||||||||||
Sbjct 1555 TCTAACGTGATGGTTTTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 1509
Score = 86.0 bits (94), Expect = 4e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| || || | || |||| ||| | || |||||||| || |||||||| |||
Sbjct 2419 CCGCCTCGGAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGAC 2360
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || |||| ||||||||||| || ||||| || || ||||| |||
Sbjct 2359 AGAGTGCGGCCATCTTCCAGTTGCTTGCCTGCAAAGATGAGACGTTGTTGGTCAGGGGGG 2300
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | |||||| || |||||| ||| | || | || | || | | ||| ||
Sbjct 2299 ATACCCTCCTTATCCTGTATCTTAGCCTTCACATTCTCAATTGTGTCAGATGGTTCTACT 2240
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| || ||||| || || || | ||||| ||||| || |||||
Sbjct 2239 TCCAGGGTAATGGTCTTTCCTGTCAATGTTTTGACAAATATTTGCAT 2193
>seq26980
Length=2195
Score = 86.0 bits (94), Expect = 4e-12
Identities = 149/215 (69%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236
|||||| | ||| || || ||| ||||| || || || || ||||| ||| | ||
Sbjct 1626 CAGCACTAAGTGCAAGGTTGATTCCTTCTGAATATTATAATCTGACAGTGTACGTCCATC 1567
Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCTTG 34294
|||| ||| || ||||| ||||| |||| ||| ||||| || || || ||| |||
Sbjct 1566 TTCCAGCTGTTTTCCTGCAAAAATTAGCCTCTGTTGGTCAGGAGGGATACCTTCT--TTG 1509
Query 34295 TCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATG 34354
|| || ||| ||| | || |||| | ||| | | ||| || |||| ||||||
Sbjct 1508 TCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCTACTTCCAATGTGATG 1449
Query 34355 GTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||||||| || | || || ||||| || |||||
Sbjct 1448 GTTTTGCCAGTCAATGTCTTTACAAAAATTTGCAT 1414
>seq78340
Length=230
Score = 82.4 bits (90), Expect = 5e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 34187 TGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGC 34246
||||||||| |||||| || || |||||||| || || ||| | || ||||| |||
Sbjct 209 TGTAAAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGTGTACGACCATCTTCCAATTGC 150
Query 34247 TTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTT 34306
|||||||||||||| || || || || || || | || || || || || ||
Sbjct 149 TTGCCTGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTATCTTGAATTTTA 90
Query 34307 TGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTG 34366
||||| || | || | || | | ||| || || | || || ||||| || ||
Sbjct 89 GCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAATGTAATTGTTTTTCCAGTA 30
Query 34367 AGAGTTTTCACAAAGATCTGCAT 34389
|| ||||| |||||||| |||||
Sbjct 29 AGTGTTTTAACAAAGATTTGCAT 7
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 320582844930560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |