Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq36366 109 5e-19 >seq36366 Length=4232 Score = 109 bits (120), Expect = 5e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 16505 ATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGA 16564 ||||| || || |||| |||| ||||| |||||||||| ||| ||||| || || ||| Sbjct 3241 ATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGA 3300 Query 16565 AAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAG 16624 |||||||| ||||| || ||||| | | ||| || || | || | ||| ||||| Sbjct 3301 AAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCTACTAAG 3360 Query 16625 TTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAttt 16684 || || ||||| || ||||| ||| ||||| || || | | || || ||||||| | Sbjct 3361 TTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGCTTGATAAAATGT 3420 Query 16685 ttttC 16689 ||||| Sbjct 3421 TTTTC 3425 Score = 98.7 bits (108), Expect = 9e-16 Identities = 116/156 (74%), Gaps = 1/156 (1%) Strand=Plus/Plus Query 15868 TATCAATAATAATTAACTTTAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATT 15927 ||| ||||| | |||| ||||||| ||| ||| | || ||||||||| || | | Sbjct 455 TATAAATAA-ACTTAAATTTAAAATTCAGCATCCAAAGTAAACACATTGTCCATGGGTTG 513 Query 15928 TGACATAACTGACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCC 15987 || ||| ||| | || || ||||||| |||| |||| |||||||| |||||||| || Sbjct 514 TGCCATCACTCCCCACTTCTGGTATTCACCAACTTTCTTCTCAAAGAAGTTTGTTTTGCC 573 Query 15988 TTCTAATGAAATATTTTCCATAAAATCAAAAGGATT 16023 ||||||||| || | ||||||||| || ||||| Sbjct 574 TTCTAATGAGATGAGATTCATAAAATCGAATGGATT 609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 458857137673600