Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq14063 190 2e-43 seq19446 105 5e-18 seq26980 89.7 4e-13 seq26979 89.7 4e-13 seq78339 87.8 1e-12 >seq14063 Length=7913 Score = 190 bits (210), Expect = 2e-43 Identities = 179/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 13216 ACTGGCCCCGTTGTATGAAGCAGAGACCCGAGCAGATGGCGGATGCCGGTTTCTTCTACA 13275 ||||||| || ||||||| |||| ||||||| | | || || || || ||||| |||| Sbjct 6958 ACTGGCCACGCAGTATGAAACAGAAACCCGAGGAACTCGCCGAAGCGGGATTCTTTTACA 7017 Query 13276 CTGGCTACGGTGACAATACAAAGTGCTTCTATTGTGACGGCGGATTGAAAGATTGGGAGC 13335 | ||| | |||||||| |||||||||||||| ||||||||||| | || || |||||| Sbjct 7018 CCGGCCAGGGTGACAAAACAAAGTGCTTCTACTGTGACGGCGGCCTCAAGGACTGGGAGA 7077 Query 13336 CGGAAGATGTACCTTGGGAACAGCATGTAAGATGGTTCGACCGTTGCGCCTACGTTCAGC 13395 || || || || ||||| ||||| | | ||||||||||| ||||| ||||| || | Sbjct 7078 ATGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGGTGCGCTTACGTGCAAC 7137 Query 13396 TAGTCAAGGGTAGAGACTACGTACAGAAAGTCATCACGGAAGCCTGCG 13443 | ||||||||| |||| ||||| ||||| || |||||||| || |||| Sbjct 7138 TGGTCAAGGGTCGAGAGTACGTCCAGAAGGTGATCACGGAGGCGTGCG 7185 >seq19446 Length=4212 Score = 105 bits (116), Expect = 5e-18 Identities = 281/427 (66%), Gaps = 2/427 (0%) Strand=Plus/Minus Query 6850 GTTCGCTCCCTTTCCTCCCGGAAACTCCCAGTCAATATCCACTCCGTCGAAAAACTTCCA 6909 ||| || || || || || || |||||||| || ||||| || || ||||| || ||||| Sbjct 2140 GTTAGCACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCA 2081 Query 6910 CGTCTCCAGAAACTCGCGCACGCTCTGCACAAACACCCGACGCTTGGCGGAGTCGTGCAT 6969 || || ||||| || ||||||||| | ||| | ||| | Sbjct 2080 TGTTAGAAGGAACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAGATTTGTCAACAAA 2021 Query 6970 CTTGTAGAAGGGGTCGCTAAGCGTCCACCCGCCTATGGAGGGTAGTATAGTCAGATTGGG 7029 | |||| || || |||||||||||| || || ||||| || || | | ||| | Sbjct 2020 AAAGAAGAAAGGATCAGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTTA-ATTCAG 1962 Query 7030 GTTGTGGT-GTTTGATGGCCATCAGCTGGCCAAAATTACCCTTATACGGCTCGTCGTACG 7088 | | | | |||| | | ||| | |||||||| || || || || ||||||| | | Sbjct 1961 GGCGAGCTTGTTTTAATGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATG 1902 Query 7089 CCTCCACACCCTTTTGTGGTTTCTGTACGGCGCCCCACAAATCGTGTATACTCACTTTGA 7148 || || ||||||||||| |||| || |||| |||||| || ||||||| Sbjct 1901 AAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGA 1842 Query 7149 AATCGTCTCGGCCCGCGCACGATCTTTGCAACGCTTCAAACGACCCCGGCACCTGTTTCA 7208 | || || ||||| ||| || | |||| |||| ||| || | || ||| | Sbjct 1841 AGTCCTCACGGCCGCTGCAGGACCGCTGCAGTGCTTGAAAACTGCCTTCAATCTCTTTTA 1782 Query 7209 AGGCGTCGTTGAGTCCGTCTCCCCCGCAAATGGGCACAAATCCGTACAGCAAATGGCTGA 7268 || ||| |||| ||||| || |||||||| || | ||| ||||| |||||||| | | Sbjct 1781 AGCTGTCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAGTAA 1722 Query 7269 GATTGGG 7275 |||| || Sbjct 1721 GATTAGG 1715 >seq26980 Length=2195 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 || ||||||| || ||||||||||| || || || |||| || | || ||| Sbjct 1622 ACTAAGTGCAAGGTTGATTCCTTCTGAATATTATAATCTGACAGTGTACGTCCATCTTCC 1563 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || |||||||| || || || | || ||||||||| ||||| | ||| || ||||| | Sbjct 1562 AGCTGTTTTCCTGCAAAAATTAGCCTCTGTTGGTCAGGAGGGATACCTTCTTTGTCTTGA 1503 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 |||||| |||||| | | | || | | || || |||| || || || ||| Sbjct 1502 ATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCTACTTCCAATGTGATGGTTTTG 1443 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| ||||| ||||| |||||||| Sbjct 1442 CCAGTCAATGTCTTTACAAAAATTTGCAT 1414 >seq26979 Length=899 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||| | | | ||||||||||| || || || ||||| |||||||| | Sbjct 761 CCACCTCTTAGCCGCAGTACCAAGTGCAAGGTAGATTCTTTTTGAATATTGTAGTCTGAC 702 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 | ||| | || || |||||||| || || || || | || ||||||||| || || Sbjct 701 AAAGTGCGTCCATCTTCAAGTTGTTTCCCAGCAAAAATAAGCCTCTGTTGGTCTGGGGGA 642 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | |||||||| || ||||||| ||||| | | |||| | ||| || Sbjct 641 ATCCCCTCCTTATCTTGAATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAACT 582 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || | |||||| |||||||| || || || || ||||| |||||||| Sbjct 581 TCAAGGGTAATAGTCTTGCCAGTAAGTGTTTTAACAAAAATTTGCAT 535 >seq78339 Length=2434 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 ||||||||||| || || || || ||||||||||||||| || ||| |||| Sbjct 1492 AATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCGTCT 1433 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 |||| ||| ||||| || || ||||| || ||||| || ||||| | || |||||||| Sbjct 1432 TCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCT 1373 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 |||||| || || | | |||| | || || |||| ||||| || Sbjct 1372 TGAATTTTCGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTT 1313 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 || ||||| || || ||||| || || ||||| ||| Sbjct 1312 TTACCCGTGAGTGTTTTCACGAAAATCTGCATTTTG 1277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 392031285835696