Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq36366 116 4e-21 >seq36366 Length=4232 Score = 116 bits (128), Expect = 4e-21 Identities = 162/225 (72%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 14226 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 14283 ||||||| ||| ||||||||| || ||||| || ||||| ||||||| || ||||| Sbjct 2356 CCTCATCCCTAGAAATAAGTTCATTGCTGAAA--GTCAATCCGGGCATCAGACCACGTTT 2413 Query 14284 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14343 ||| ||||||||||||| ||| || || || || |||||||| |||||||| ||||| Sbjct 2414 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCTTCAACTGCCGCAAA 2473 Query 14344 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14403 || || | ||||||||||| | || | ||| | ||||| | | ||||| || Sbjct 2474 AGCAATAATACGTTCTCCAAATGTAGCAGTCTTGCTGCCGATCCACTGTAATGCCCAGTC 2533 Query 14404 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14448 | || || || | | | | || ||||| ||||||||||| Sbjct 2534 TGCCTTCTTCTTTACACACGGTAGAGTCTCAATTGCATTAAATAA 2578 Score = 93.3 bits (102), Expect = 4e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 14474 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14533 || ||||| ||||| | ||| ||||| || || || | ||||||||||| || ||| Sbjct 3241 ATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGA 3300 Query 14534 AAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAA 14593 |||||||| || || || ||||| | | ||| |||||| | || | || | || Sbjct 3301 AAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCTACTAAG 3360 Query 14594 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAA 14634 || |||||||| ||||||||| ||| ||||| ||||| || Sbjct 3361 TTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAA 3401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478534008599680