Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27]
632,176 sequences; 365,010,054 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq19446 239 4e-58
seq78339 91.5 1e-13
seq78338 91.5 1e-13
>seq19446
Length=4212
Score = 239 bits (264), Expect = 4e-58
Identities = 780/1201 (65%), Gaps = 43/1201 (4%)
Strand=Plus/Minus
Query 35666 CCAATATGCATAGCGTTGAGCAAATCGCCGTTGTCCGCATCGATTTCCCATGCGAATAAT 35725
|| || | ||| || || || | ||| ||||| || || ||||||||||| || || |
Sbjct 2835 CCCATGTTCATGGCATTCAGTAGATCACCGTTATCAGCGTCGATTTCCCAAGCAAAGAGA 2776
Query 35726 CCGCCGAGTCTACGCTGAAGCACGTATTCGCCTTTGGCCAGTACCGATCTTTCGCTGTCA 35785
||||| || | | || |||| || || | | |||||||| | |||||
Sbjct 2775 CCGCCTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACCGATCTAGCATTGTCA 2716
Query 35786 TACGATATTAAGTCGCCAGAGGCGCGGTC-GAATACGTACGCAGCCTTGGCCACGTCGTC 35844
|| | || | || |||| | |||| ||| ||||| | || | ||| || | |||
Sbjct 2715 TAAGTTACAAGATCTCCAGTTGAT-GGTCTGAAGACGTAAGGTGCTTGGGCGACATTGTC 2657
Query 35845 G-AATG-----CGTATTCGTAACGCGAAATGTTTTTAGCAATCTGTCTGTAGTCGACCAC 35898
| |||| | | | | | | ||| | || ||||||| |||||||| |||||
Sbjct 2656 GTAATGGAACTCCCACTTGCCTTGAGCAATTTCATTCGCAATCTCCCTGTAGTCAACCAC 2597
Query 35899 GCCGTTTTCCCATGTACCCGTGATCGGTCCGACGGCTACGCCACTGAATGGATTGTCACT 35958
|||| || ||| ||||| ||| ||||| || ||| |||| ||| |||
Sbjct 2596 TCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGGAATGTTGTC 2537
Query 35959 GTTGTAGTTGTGGACGCCCGTCCAACCGCGGCCGTACATTGCTACGCCCAACACGAGttt 36018
| ||| | |||||||| ||||| || || || ||||| || || || | || | ||
Sbjct 2536 TTCGTAATCATGGACGCCAGTCCAGCCACGACCATACATAGCAACACCGACTACAATCTT 2477
Query 36019 ttttGGATTCACTCGTTGCGCGAGCAAAGCGTCCACGGCCACGTTGGCGGTGTACGGTTC 36078
|| |||||||||| || || | ||| | || | | || | ||||| | |||
Sbjct 2476 CTTAGGATTCACTCCCTGTGCCAACAAGTATTTTACTCCGAAGTCAGATGTGTAGGTTTC 2417
Query 36079 GTTAGGTTTCCACGCGGAACCGTACAGTGCCGTCTGATGACCGAGATCGGTAT---TAGA 36135
|| || ||||| || | |||||| || || ||||| || ||| |||| | ||
Sbjct 2416 CTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGA---GTATCGTTTGA 2360
Query 36136 CCAAGCTCCTTTGAAATCATAACTCATCACGAAAATTTTATCTAAATACTGTTGTGCTCG 36195
||| ||||| ||||| ||||||||||||| |||||| | ||| | ||| | ||| ||
Sbjct 2359 CCAGGCTCCCTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAATTTTGAGCCTT 2300
Query 36196 GTCGTAATTAACCGCGGCGATCTTGTCTATGCCAGCGCTAATCGCTGTGGTGAGTTCTAA 36255
| |||| | ||| | ||| || || ||||||||||| || | || | ||| |
Sbjct 2299 GCCGTAGTCAACGACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAAGTTAATTCGTA 2240
Query 36256 AGT---ACGATTCGTTTGTATTTGA-ACTTGATCGAGCATGGCGCGCAATTCGCCCAATA 36311
| || |||| | | ||| | || ||||||||| | || ||||| || |
Sbjct 2239 TTTCTTACCATTCTT----AGCTGAGAGTTCATCGAGCATCTCACGTAATTCTTTCATCA 2184
Query 36312 AAGCGATATACGTGTTATTGTCGCGTTCCACATCGCCAACG---TTTGGATTGGCGCCTT 36368
|| | ||| | || | | || | || | || | || || || ||||
Sbjct 2183 AACTTACATA---GCAAT---CACCATCTTCTGGGCTACCGAGATCAGGGTTAGCACCTT 2130
Query 36369 TGCCGCCCGGAAATTCCCAATCAATATCGATGCCGTCGAAAAATTTCCATGTCAACACAA 36428
|||| || || || |||||||| ||||| | || ||||| ||||||||||| | | |
Sbjct 2129 TGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAGAAGGA 2070
Query 36429 ATTCACGCACGGATTCGACAAAAATTTGTCGCGTTCGCGCA---TCGTGCATATGATAGA 36485
| || || || | ||||| ||| |||| | | | || | | | |||
Sbjct 2069 ACTCCTTTACTGACTGCACAAA------TCGTGTTCTCTTAGATTTGTCAACAAAAAAGA 2016
Query 36486 AG---GGATCGGACAGTGTCCAACCGCCGATTGATGCCAACACTTTTAGATTGGGATTGG 36542
|| ||||| | || ||||| || || || || | | | |||| | || |
Sbjct 2015 AGAAAGGATCAGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTTAATTCAGGGCGAG 1956
Query 36543 CCAATTTTGCTGCCATTAATTGACCAAAATTGCCTTTGTAGGGTTCGTTCCATGCGCTAA 36602
| |||| || ||||||||| ||||| |||||||||||||| |||||||||| |
Sbjct 1955 CTTGTTTTAATGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACA 1896
Query 36603 CGCCTGTTTGTGGTTTTTGGAGCGCCGCCCACGGATCGTGTATGGAAACTTTAAAATTGT 36662
||| ||||||||||||| | || ||||| |||||||| || || ||||| || | |
Sbjct 1895 ATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCT 1836
Query 36663 CCCTGCCAGCGCACGATCTTTGCAACGCTTCAAAACTCCCCGTGATAGATTTTAAACTGT 36722
| | ||| ||| || | |||| |||| |||||| || || |||||| ||||
Sbjct 1835 CACGGCCGCTGCAGGACCGCTGCAGTGCTTGAAAACTGCCTTCAATCTCTTTTAAGCTGT 1776
Query 36723 CGTTTATACCGTCACCGCCGCAAATCGGTATAAATCCGTATAAAATGTGCGAAAGGTTCG 36782
| || || ||||||||||||||||| || ||||| ||||| | | || | ||| || |
Sbjct 1775 CATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAGTAAGATTAG 1716
Query 36783 GCGTGGGCACTTTGTCCACGGGAAAAGATCGACCGTAAACGCCCCATTCGACAAAATAGG 36842
| | || | |||||||| || | | || ||||||||||| || || ||||
Sbjct 1715 GTATAGGTATGCGATCCACGGGGAATTTCCTAGGATAGACGCCCCATTCTACGAAGTAGG 1656
Query 36843 C 36843
|
Sbjct 1655 C 1655
>seq78339
Length=2434
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
||||| ||||||||||| ||| |||| ||||| || |||||| | || || || |
Sbjct 1965 ATGCAAATATTTGTTAAGACCCTAACAGGCAAGACTATAACCCTGGAGGTGGAGCCATCT 2024
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|||| | |||| ||| |||| || ||| | ||||| ||| | || || ||
Sbjct 2025 GACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGCATTCCCCCAGATCAA 2084
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011
|||||| | || | ||| ||||| ||| |||||||| ||| | || |||| |
Sbjct 2085 CAACGTCTTATCTTTGCCGGCAAGCAATTGGAAGATGGGCGTACTTTATCAGACTACAAC 2144
Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059
|| || || ||| |||| |||||| |||| | || ||||| || |||
Sbjct 2145 ATCCAAAAGGAGTCCACCCTTCATCTAGTACTGCGTTTGCGAGGTGGT 2192
Score = 82.4 bits (90), Expect = 6e-11
Identities = 147/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
||||| |||||||| ||||| || || || || || || ||| | || || ||| |
Sbjct 2193 ATGCAAATATTTGTCAAAACATTGACAGGAAAGACCATTACCCTGGAAGTAGAACCATCT 2252
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTA--CCGGTTGACC 24949
|||| | || | ||| |||| || || | | | ||| ||| ||| || |||||
Sbjct 2253 GACACAATTGAGAATGTGAAGGCTAAGATA-CAGGATAAGGAGG-GTATCCCCCCTGACC 2310
Query 24950 AGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACA 25009
| |||||| | || | ||| ||||| |||||||||||| | ||| || || ||||
Sbjct 2311 AACAACGTCTCATCTTTGCAGGCAAGCAACTGGAAGATGGCCGCACTCTGTCTGACTACA 2370
Query 25010 GCATACAGAAAGAGGCCACGCTTCATTTAGT 25040
|| ||||||||| |||| ||||| || ||
Sbjct 2371 ATATCCAGAAAGAGTCCACCCTTCACTTGGT 2401
>seq78338
Length=1389
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
|||||||| |||||||||||| |||| || || || || ||| | || || || |
Sbjct 28 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACTATTACCCTGGAAGTGGAGCCCTCT 87
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|||| | | |||| ||| || | ||||| | ||||||||| | || ||| ||
Sbjct 88 GACACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGCATCCCACCTGATCAA 147
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011
|||||| | || | |||||||| ||| |||||||| || || || ||||
Sbjct 148 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAAT 207
Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059
|| || ||||| |||| |||||||| || | || |||| ||||||
Sbjct 208 ATTCAAAAAGAATCCACACTTCATTTGGTACTGCGTCTGCGAGGAGGT 255
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 415081116177920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |