Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq19446 239 4e-58 seq78339 91.5 1e-13 seq78338 91.5 1e-13 >seq19446 Length=4212 Score = 239 bits (264), Expect = 4e-58 Identities = 780/1201 (65%), Gaps = 43/1201 (4%) Strand=Plus/Minus Query 35666 CCAATATGCATAGCGTTGAGCAAATCGCCGTTGTCCGCATCGATTTCCCATGCGAATAAT 35725 || || | ||| || || || | ||| ||||| || || ||||||||||| || || | Sbjct 2835 CCCATGTTCATGGCATTCAGTAGATCACCGTTATCAGCGTCGATTTCCCAAGCAAAGAGA 2776 Query 35726 CCGCCGAGTCTACGCTGAAGCACGTATTCGCCTTTGGCCAGTACCGATCTTTCGCTGTCA 35785 ||||| || | | || |||| || || | | |||||||| | ||||| Sbjct 2775 CCGCCTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACCGATCTAGCATTGTCA 2716 Query 35786 TACGATATTAAGTCGCCAGAGGCGCGGTC-GAATACGTACGCAGCCTTGGCCACGTCGTC 35844 || | || | || |||| | |||| ||| ||||| | || | ||| || | ||| Sbjct 2715 TAAGTTACAAGATCTCCAGTTGAT-GGTCTGAAGACGTAAGGTGCTTGGGCGACATTGTC 2657 Query 35845 G-AATG-----CGTATTCGTAACGCGAAATGTTTTTAGCAATCTGTCTGTAGTCGACCAC 35898 | |||| | | | | | | ||| | || ||||||| |||||||| ||||| Sbjct 2656 GTAATGGAACTCCCACTTGCCTTGAGCAATTTCATTCGCAATCTCCCTGTAGTCAACCAC 2597 Query 35899 GCCGTTTTCCCATGTACCCGTGATCGGTCCGACGGCTACGCCACTGAATGGATTGTCACT 35958 |||| || ||| ||||| ||| ||||| || ||| |||| ||| ||| Sbjct 2596 TCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGGAATGTTGTC 2537 Query 35959 GTTGTAGTTGTGGACGCCCGTCCAACCGCGGCCGTACATTGCTACGCCCAACACGAGttt 36018 | ||| | |||||||| ||||| || || || ||||| || || || | || | || Sbjct 2536 TTCGTAATCATGGACGCCAGTCCAGCCACGACCATACATAGCAACACCGACTACAATCTT 2477 Query 36019 ttttGGATTCACTCGTTGCGCGAGCAAAGCGTCCACGGCCACGTTGGCGGTGTACGGTTC 36078 || |||||||||| || || | ||| | || | | || | ||||| | ||| Sbjct 2476 CTTAGGATTCACTCCCTGTGCCAACAAGTATTTTACTCCGAAGTCAGATGTGTAGGTTTC 2417 Query 36079 GTTAGGTTTCCACGCGGAACCGTACAGTGCCGTCTGATGACCGAGATCGGTAT---TAGA 36135 || || ||||| || | |||||| || || ||||| || ||| |||| | || Sbjct 2416 CTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGA---GTATCGTTTGA 2360 Query 36136 CCAAGCTCCTTTGAAATCATAACTCATCACGAAAATTTTATCTAAATACTGTTGTGCTCG 36195 ||| ||||| ||||| ||||||||||||| |||||| | ||| | ||| | ||| || Sbjct 2359 CCAGGCTCCCTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAATTTTGAGCCTT 2300 Query 36196 GTCGTAATTAACCGCGGCGATCTTGTCTATGCCAGCGCTAATCGCTGTGGTGAGTTCTAA 36255 | |||| | ||| | ||| || || ||||||||||| || | || | ||| | Sbjct 2299 GCCGTAGTCAACGACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAAGTTAATTCGTA 2240 Query 36256 AGT---ACGATTCGTTTGTATTTGA-ACTTGATCGAGCATGGCGCGCAATTCGCCCAATA 36311 | || |||| | | ||| | || ||||||||| | || ||||| || | Sbjct 2239 TTTCTTACCATTCTT----AGCTGAGAGTTCATCGAGCATCTCACGTAATTCTTTCATCA 2184 Query 36312 AAGCGATATACGTGTTATTGTCGCGTTCCACATCGCCAACG---TTTGGATTGGCGCCTT 36368 || | ||| | || | | || | || | || | || || || |||| Sbjct 2183 AACTTACATA---GCAAT---CACCATCTTCTGGGCTACCGAGATCAGGGTTAGCACCTT 2130 Query 36369 TGCCGCCCGGAAATTCCCAATCAATATCGATGCCGTCGAAAAATTTCCATGTCAACACAA 36428 |||| || || || |||||||| ||||| | || ||||| ||||||||||| | | | Sbjct 2129 TGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAGAAGGA 2070 Query 36429 ATTCACGCACGGATTCGACAAAAATTTGTCGCGTTCGCGCA---TCGTGCATATGATAGA 36485 | || || || | ||||| ||| |||| | | | || | | | ||| Sbjct 2069 ACTCCTTTACTGACTGCACAAA------TCGTGTTCTCTTAGATTTGTCAACAAAAAAGA 2016 Query 36486 AG---GGATCGGACAGTGTCCAACCGCCGATTGATGCCAACACTTTTAGATTGGGATTGG 36542 || ||||| | || ||||| || || || || | | | |||| | || | Sbjct 2015 AGAAAGGATCAGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTTAATTCAGGGCGAG 1956 Query 36543 CCAATTTTGCTGCCATTAATTGACCAAAATTGCCTTTGTAGGGTTCGTTCCATGCGCTAA 36602 | |||| || ||||||||| ||||| |||||||||||||| |||||||||| | Sbjct 1955 CTTGTTTTAATGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACA 1896 Query 36603 CGCCTGTTTGTGGTTTTTGGAGCGCCGCCCACGGATCGTGTATGGAAACTTTAAAATTGT 36662 ||| ||||||||||||| | || ||||| |||||||| || || ||||| || | | Sbjct 1895 ATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCT 1836 Query 36663 CCCTGCCAGCGCACGATCTTTGCAACGCTTCAAAACTCCCCGTGATAGATTTTAAACTGT 36722 | | ||| ||| || | |||| |||| |||||| || || |||||| |||| Sbjct 1835 CACGGCCGCTGCAGGACCGCTGCAGTGCTTGAAAACTGCCTTCAATCTCTTTTAAGCTGT 1776 Query 36723 CGTTTATACCGTCACCGCCGCAAATCGGTATAAATCCGTATAAAATGTGCGAAAGGTTCG 36782 | || || ||||||||||||||||| || ||||| ||||| | | || | ||| || | Sbjct 1775 CATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAGTAAGATTAG 1716 Query 36783 GCGTGGGCACTTTGTCCACGGGAAAAGATCGACCGTAAACGCCCCATTCGACAAAATAGG 36842 | | || | |||||||| || | | || ||||||||||| || || |||| Sbjct 1715 GTATAGGTATGCGATCCACGGGGAATTTCCTAGGATAGACGCCCCATTCTACGAAGTAGG 1656 Query 36843 C 36843 | Sbjct 1655 C 1655 >seq78339 Length=2434 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||| ||||||||||| ||| |||| ||||| || |||||| | || || || | Sbjct 1965 ATGCAAATATTTGTTAAGACCCTAACAGGCAAGACTATAACCCTGGAGGTGGAGCCATCT 2024 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | |||| ||| |||| || ||| | ||||| ||| | || || || Sbjct 2025 GACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGCATTCCCCCAGATCAA 2084 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 |||||| | || | ||| ||||| ||| |||||||| ||| | || |||| | Sbjct 2085 CAACGTCTTATCTTTGCCGGCAAGCAATTGGAAGATGGGCGTACTTTATCAGACTACAAC 2144 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 || || || ||| |||| |||||| |||| | || ||||| || ||| Sbjct 2145 ATCCAAAAGGAGTCCACCCTTCATCTAGTACTGCGTTTGCGAGGTGGT 2192 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||| |||||||| ||||| || || || || || || ||| | || || ||| | Sbjct 2193 ATGCAAATATTTGTCAAAACATTGACAGGAAAGACCATTACCCTGGAAGTAGAACCATCT 2252 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTA--CCGGTTGACC 24949 |||| | || | ||| |||| || || | | | ||| ||| ||| || ||||| Sbjct 2253 GACACAATTGAGAATGTGAAGGCTAAGATA-CAGGATAAGGAGG-GTATCCCCCCTGACC 2310 Query 24950 AGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACA 25009 | |||||| | || | ||| ||||| |||||||||||| | ||| || || |||| Sbjct 2311 AACAACGTCTCATCTTTGCAGGCAAGCAACTGGAAGATGGCCGCACTCTGTCTGACTACA 2370 Query 25010 GCATACAGAAAGAGGCCACGCTTCATTTAGT 25040 || ||||||||| |||| ||||| || || Sbjct 2371 ATATCCAGAAAGAGTCCACCCTTCACTTGGT 2401 >seq78338 Length=1389 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| |||||||||||| |||| || || || || ||| | || || || | Sbjct 28 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACTATTACCCTGGAAGTGGAGCCCTCT 87 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | | |||| ||| || | ||||| | ||||||||| | || ||| || Sbjct 88 GACACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGCATCCCACCTGATCAA 147 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 |||||| | || | |||||||| ||| |||||||| || || || |||| Sbjct 148 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAAT 207 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 || || ||||| |||| |||||||| || | || |||| |||||| Sbjct 208 ATTCAAAAAGAATCCACACTTCATTTGGTACTGCGTCTGCGAGGAGGT 255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415081116177920