Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27]
632,176 sequences; 365,010,054 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq227148 536 2e-147
seq352311 100 4e-16
seq36366 98.7 1e-15
seq242670 95.1 2e-14
seq187312 91.5 2e-13
>seq227148
Length=2115
Score = 536 bits (594), Expect = 2e-147
Identities = 1216/1806 (67%), Gaps = 59/1806 (3%)
Strand=Plus/Minus
Query 62028 ATTTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAG 62087
|||||| | || || | || || ||||| | | | ||| ||||| || |||| |||
Sbjct 1836 ATTTTACCTTTATCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTCCGTAAGTAG 1777
Query 62088 TACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAA 62147
|||||||| ||||||| ||| | |||| ||| ||||| ||| ||||||||| |
Sbjct 1776 TACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATAGACGTTAGTTTCCCA 1717
Query 62148 TAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTG 62207
|| | || | || | ||| || || | |||||| ||||| || || || ||||| ||
Sbjct 1716 TAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGGCTTTGGTCTATAAACGCTCCTCTA 1657
Query 62208 TCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCG 62266
|| || ||||| | |||| || || ||| ||| ||||| | ||||| || || ||
Sbjct 1656 TCAGCCGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCT 1597
Query 62267 CTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTACCATAATCCT 62323
|||| | |||| |||| |||| ||| || || |||||| | || ||
Sbjct 1596 CTTATT-TCTTTAGGAATTTTTGCAATATCTTGTATAGATCCATTGTTGTAAATTATAAG 1538
Query 62324 ATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTT 62383
||| || || || |||| |||||| | | || ||| | | || || || ||||
Sbjct 1537 ATTTTTCATATCTTCATCCCATAAATCAGCCCGAGTCAAATCAGTGAGAAGGTGATGGTT 1478
Query 62384 AACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTC 62443
||||| | ||||||||||| || ||||| | ||||||||| ||| | |||||
Sbjct 1477 CACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTC 1418
Query 62444 CACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAA 62503
| || ||| | || || | |||||| ||||| || |||||||||||||| || | |||
Sbjct 1417 AAAAGATTCAGTGTTACCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGGGCTATCAA 1358
Query 62504 TAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAG 62563
| | ||| | | ||||| | ||| || || ||||| || |||| | ||||||
Sbjct 1357 CAGAGAATTGCGCAAACCGTGTTTTCCTATCTTGTCTTTGAGGGCAGCCCAGTCCCAAAG 1298
Query 62564 ATCCGACGG-------TACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGC-G 62615
|| | || | | ||| ||| ||||| ||||| | || || |
Sbjct 1297 GTCTGTAGGAGTTTTGTCCCACATATC-------ATACTGTAGGATACCTTGGCTTGCTG 1245
Query 62616 TACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCT 62675
|| ||| |||||| |||| ||||| || || |||| || |||||| || |||
Sbjct 1244 GACTC-CCTTGATATGTGCTGTATGTGCCTTCTTTTTCTGCTAATTCACAACTAGCTTCT 1186
Query 62676 AATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTA 62735
|||||||| |||||||| |||||||| || | | ||| |||| | ||||| ||
Sbjct 1185 AATGCACCATAATAAATTGTTTCAAATATTTGTTGATTGAGATGTATTGCTTTTTCACTT 1126
Query 62736 TCAAATGGATAATTTAAGAGA-ATAAACGCGTCCGCTAATCCTTGAACACCAATACCGAT 62794
|| | || || | | | | | |||||| || || | || |||||||||||||| ||
Sbjct 1125 TCGTAAGG-TATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAAT 1067
Query 62795 AGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTAT 62854
|||||| |||||| |||| || ||| ||||| || | ||||||| | |||| ||| ||
Sbjct 1066 AGGTCTGTGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAAT 1007
Query 62855 AATTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATC 62911
| ||| || | |||| | ||||| ||||| | || || | || |||||
Sbjct 1006 GACTTTGTTTAAATTTTGAGTTACAAT--CTTTGTG-ATTTCTTTTAACTTTTTAAAATT 950
Query 62912 AAATCGCCCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTAC 62971
||||| | || | ||||||||||| | ||| | || || || ||||| || || ||
Sbjct 949 AAATCTCTTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTACAAACTGCCAC 890
Query 62972 CTCATTAGCATCCGCA---TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGT 63028
|| | | || | | ||||| | | ||||||||||||||| ||||| || || ||
Sbjct 889 TTCTT---CTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATTGT 833
Query 63029 TCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGT 63088
|| | ||||| |||||||||||| ||||||| ||||||||||| | ||| |||| ||
Sbjct 832 GCCAAGATTTTTTTGATTACTCTTCCTGTTACAAGCATCCTTATATAACATGTATGGTGT 773
Query 63089 ACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGC-----CTT-TAT 63142
|||||| || | || | ||||||||| | ||||| | || |||| ||| | |
Sbjct 772 ACCAGTCTCTACTTGGGCTTCTATAATTGACTTCCATAACTCTTGAGCTCGGACTTGTTT 713
Query 63143 TATAGATT-TGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTC 63201
|||| || ||| ||| ||| | ||| ||||| ||| || |||||| || ||||
Sbjct 712 TATAAATCGTGTTTCTTCTTCATATTTGGTATATAGT------TC-TTCGAATTCCTCTC 660
Query 63202 CCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCAT 63261
| || | | | | ||||| |||| |||||||| | ||| | | ||||
Sbjct 659 CATAACAGTCAGCGAGGCCGGGACAATCATGAGGACACATGAGACTCCAAACGTCATCAT 600
Query 63262 CCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTC 63321
| |||| ||||||||| |||||||||||||| | ||| ||| || ||||| | ||
Sbjct 599 TTTCTACTCTTTTCATAAACAGATCAGGAATCCATAAAGCATAAAACAGTTCTCTAGCTC 540
Query 63322 TATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCC 63381
| ||| || || ||||||||||| || | ||| | |||| | | || || | |||||
Sbjct 539 TCATTTCTTCCTTACCTGTATTCTTCTTTAAATCTAAGAACTCAAATATGTCCGCATGCC 480
Query 63382 ACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATC 63441
| || || || || || || | | ||||| ||||||||||| || ||||||| ||||
Sbjct 479 AAGGCTCTAAATAAATTGCAAATGCACCAGGGCGTTTGTTTCCACCTTGATCTACATATC 420
Query 63442 TAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTAC 63501
| || || || ||||| |||||||||||||| | | ||| || || | ||||| || |
Sbjct 419 TGGCAGTATTGTTATACACTCTCAACATTGGCACTAGACCATTCGAGACGCCATTAGTGC 360
Query 63502 CGGAGATATAGCCTCCACTG-GCACGAAT---ATTACTAATTGATAGACCTATTCCCCCT 63557
| | || || || ||| || | || || || || || |||||| || ||
Sbjct 359 CAGCTATGTAAGAACC-CTGAGCTCTGATGCAATGTGTA--TG-TAAACCTATGCCACCA 304
Query 63558 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCA 63617
|| |||||| |||||||| || ||||||| || ||| | || ||||| ||||||||
Sbjct 303 GCAGATTTAGAAATTAATGCACACTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCG 244
Query 63618 TCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAAT 63677
|| |||| | || || || || | || | || | || | || ||
Sbjct 243 TCTTTCATAGCTATAAGGAAGCAAGAGGAAAGCTGTGGCCGTGGTGTAGCTGCTGAGAAC 184
Query 63678 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT 63737
| ||||| ||||| ||||| |||| || || | | ||| || || | || ||
Sbjct 183 AGTGTAGGGCTTGCGTGTGTAAAATATTTCTCCGACATCATATTATAAGTATTGATTGCA 124
Query 63738 GAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 63796
|| || || || | ||||| |||| || ||| | ||| | |||||| ||||||||
Sbjct 123 CTATCAATGTCTTCACCG-TGAATACCTATTGAGACTCTCATAAGCATGTGTTGAGGTCT 65
Query 63797 TTCAAC 63802
||||||
Sbjct 64 TTCAAC 59
>seq352311
Length=307
Score = 100 bits (110), Expect = 4e-16
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 64017 ttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCC 64076
|| || || || ||||||| ||| ||||| || |||||||| || | ||||||||||||
Sbjct 278 TTCTTGGTGTCTTTGTGTAAATTGGATATTGCGATTCTGGCAGCCAAAATGGCATAATCG 219
Query 64077 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 64136
||||| | ||| || ||| ||||| ||||| || || ||| | || | || |||||
Sbjct 218 GGATGATCTGTTGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCCGTT 159
Query 64137 GTTACTCCATTATATATTCC 64156
||||| ||| |||||| ||
Sbjct 158 GTTACACCAGAATATATGCC 139
>seq36366
Length=4232
Score = 98.7 bits (108), Expect = 1e-15
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 34068 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 34127
|| |||| || ||||||||| | |||||||| ||||| || || ||||||||||| | |
Sbjct 3607 TTGGATAAGTCTACTTCTTCCGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 3666
Query 34128 CAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATT 34174
|| ||||| |||||||||||||||| ||||| || | |||||||
Sbjct 3667 CATATGTCTGGATATTGGATTGGGAATATAACGAAACGTCTTGGATT 3713
>seq242670
Length=698
Score = 95.1 bits (104), Expect = 2e-14
Identities = 87/110 (79%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 63807 TTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 63866
|| |||| ||| |||||||| || ||| ||||||||||||||||||||||||||||||||
Sbjct 391 TTATTGTCTATCTTCAACAAATATGATCTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 450
Query 63867 GAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTT 63916
||| |||| || |||| ||| | || | | || ||||||| |||
Sbjct 451 TTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTATTTTT 500
>seq187312
Length=1851
Score = 91.5 bits (100), Expect = 2e-13
Identities = 243/369 (66%), Gaps = 7/369 (2%)
Strand=Plus/Plus
Query 155252 TTATGACTCCA--ATTAATCCCATGTTAGCGGAATCATGTGATTCTGTCAATAAGGCGTT 155309
||||||||||| |||| || |||||||| ||| | || | || || | | ||| |
Sbjct 1037 TTATGACTCCAGTATTA--CCTATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTAT 1094
Query 155310 TAAAAAATTTCCATCAGGAATGTTTGCGGAAGTCAAATACGATGGTGAAAGAGTACAAGT 155369
||||||| |||| || |||||| | || | ||||| ||||| ||| | || |||||
Sbjct 1095 GAAAAAATGTCCAAATGGTATGTTTTCTGAGATTAAATATGATGGAGAACGGGTTCAAGT 1154
Query 155370 TCATaaaaaaaaTAACGAGTTTGCATTCTTTAGTAGAAACATGAAACCAGTACTCTCTCA 155429
|||||||| || ||||| || ||| | | | | ||||||||| | ||||
Sbjct 1155 GCATAAAAAGGGAAATGAGTTCAAATATTTTTCTCGTGCCTTAAAACCAGTAATGGCTCA 1214
Query 155430 TAAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTTAAAAAAGCTACGTCTATCGT 155489
||||| | || | ||||| || |||| ||||||||| |||| | | |
Sbjct 1215 CAAAGTTAGTCATTTTAAAGATTATTTACCAAAAGCATTTCCTAAAGGAGATGATTTGAT 1274
Query 155490 ATTGGATTCTGAAATTGTTCTTGTAGACGAACATAATG---TACCGCTACCGTTTGGAAG 155546
|||||| ||||| | || | || || | ||| || ||| | || || || |
Sbjct 1275 TTTGGATGCTGAAGTACTTATGGTTGATGTGAATACTGGAAAACCATTGCCTTTCGGTAC 1334
Query 155547 TTTAGGTATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTCGTGTTTGA 155606
|||||||| |||||| | ||||| |||| | || | | ||||| | | |||||
Sbjct 1335 ATTAGGTATTCACAAACAATCAGAATTTAAAGATGCTCAAGTTTGTTTATATATATTTGA 1394
Query 155607 CTGTTTATA 155615
|| || ||
Sbjct 1395 TTGCTTGTA 1403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 624840655361280
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