Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27]
632,176 sequences; 365,010,054 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq227148 531 5e-146
seq36366 134 1e-26
>seq227148
Length=2115
Score = 531 bits (588), Expect = 5e-146
Identities = 1189/1764 (67%), Gaps = 35/1764 (2%)
Strand=Plus/Minus
Query 36805 ATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTC 36864
|||| ||||| ||| | |||||| | | || |||||||| ||||||| |||| | ||
Sbjct 1809 ATAGCATTTGCTGCTGGTTTTGTCCGTAAGTAGTACATTCCTGTTTTTAAACCCATTTTC 1750
Query 36865 CATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTC 36924
|| ||| ||||| ||| || ||||| | || |||| ||| | | || ||| |
Sbjct 1749 CAAGCGTGGAAATGAATAGACGTTAGTTTCCCATAGTTAGGTTTAGCAACATGTATGTTA 1690
Query 36925 ATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTT 36984
| ||||| ||||| ||||||||||| ||||| || || ||||| | || | || ||
Sbjct 1689 AAAGATTGGCTTTGGTCTATAAACGCTCCTCTATCAGCCGCCATCTGTA---TGGATGTT 1633
Query 36985 T---GAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT--- 37038
| | || |||||||| || ||||| || | | | |||| || | | | || | |
Sbjct 1632 TTCAGTGAAATCTCCCATACGGTTTTGTACAAATCTCTTAT-TTCTTTAGGAATTTTTGC 1574
Query 37039 -AAATGTTGAATAGAACCATTAT-GTAACACAATTGTATTCTTTATGTCATTATTCCACA 37096
| || ||| ||||| ||||| | |||| | || ||| || || || | || ||| |
Sbjct 1573 AATATCTTGTATAGATCCATTGTTGTAA-ATTATAAGATTTTTCATATCTTCATCCCATA 1515
Query 37097 TATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATA 37156
|| | | | || | | ||||| | || || || |||| ||||||||||
Sbjct 1514 AATCAGCCCGAGTCAAATCAGTGAGAAGGTGATGGTTCACTACAGGAAATTCTCCAGATA 1455
Query 37157 ATACTCTTCTT--GTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAA 37214
| ||||||||| ||| |||| ||| | ||| | ||||||| || ||| | |||| |
Sbjct 1454 AGACTCTTCTTTGGTAAATAT-TTGAT-GTAAAGGGTTCAAAAGATTCAGTGTTACCAAG 1397
Query 37215 TATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATG 37274
||||| | ||||| ||||| ||||| || ||||| | || ||| | ||| || ||
Sbjct 1396 AATTTGTGCAGTAGAGGCAGTCGGCATAGGGGCTATCAACAGAGAATTGCGCAAACCGTG 1337
Query 37275 TGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCA 37334
| | || | | ||| || || ||| ||||| | ||||| || | || |||
Sbjct 1336 TTTTCCTATCTTGTCTTTGAGGGCAGCCCAGTCCCAAAGGTCTGTAGGAGTTTTGTCCCA 1277
Query 37335 CATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCC 37394
||||||||| ||||| ||||||| || |||||| | | |||||| || | ||
Sbjct 1276 CATATCATACTGTAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTGCTGTATGTGCC 1217
Query 37395 GTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAAT 37454
| ||| |||| ||| ||||||| ||||| ||| ||||||| |||||||| || ||
Sbjct 1216 TTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATAT 1157
Query 37455 TTGTATATTTAATATTTTTGCTTCTTCGCTATCG-AATGCATAGCCCAATAATATAAACA 37513
|||| ||| | | |||||| ||| || ||| || | || | || || | ||||
Sbjct 1156 TTGTTGATTGAGATGTATTGCTTTTTCACTTTCGTAAGGTAT-TCTCATCAACACAAACG 1098
Query 37514 CATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACG 37573
|||| |||| ||||||||||| ||||| || ||||| ||| || |||| || | |
Sbjct 1097 CATCTGCCATGCCCTGAACACCAATACCAATAGGTCTGTGTCTCATATTTGAAGTTTTTG 1038
Query 37574 ATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATTT 37633
||| || |||||| | || | ||| || | ||| |||| ||||| | || || |
Sbjct 1037 CTTCAGGGACAGGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTGAGTTACAATCT 978
Query 37634 TCGTAATTATTCTCAACTTGTCGAACATAAATACGTTATTATTAACAAATTTACTCAACG 37693
| || ||| | | ||||| | || ||||| ||||| | |||||| | | | |
Sbjct 977 TTGTGATTTCTTTTAACTTTTTAAAATTAAATCTCTTATTTTCAACAAACATGTTAAGTG 918
Query 37694 AAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTG 37753
|| || | || ||||| || || ||||| ||||| | | |||| | || ||| |
Sbjct 917 CTATGGAAGCAAGGTTACAAACTGCCACTTCTTCTTCTGAAGTGTATTGCACAACCTCAG 858
Query 37754 TACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAG 37813
| || ||||| || || ||||||| || | ||| ||||||| || | |||||||
Sbjct 857 TGCAAAGATTGCTACATTTAATTGTGCCAAGATTTTTTTGATTACTCTTCCTGTTACAAG 798
Query 37814 AATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCC 37873
||| ||||||| || || || || || |||| ||| || || ||||| || ||||
Sbjct 797 CATCCTTATATAACATGTATGGTGTACCAGTCTCTACTTGGGCTTCTATAATTGACTTCC 738
Query 37874 ATAAACTTCTT--GCTTTAACGATCGCTTT---AAt-ttttttCTTTGTTTCGTATTCTA 37927
|||| |||| ||| || | | ||| ||| | |||||| ||| ||||
Sbjct 737 ATAA--CTCTTGAGCTCGGAC--TTGTTTTATAAATCGTGTTTCTT--CTTCATATTTGG 684
Query 37928 TATATAATTTGTTAAAATCATTCCCCCAT-ACA-TCGCATAATCCTGGACATTCGCATGG 37985
|||||| || | || || | | |||| ||| || | || ||||| || ||
Sbjct 683 TATATAGTTCTTCGAATTCCT--CTCCATAACAGTCAGCGAGGCCGGGACAATCATGAGG 626
Query 37986 ACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCA 38045
|||||| ||| ||| | ||||| |||||||| | || |||||| | |||||| | |||
Sbjct 625 ACACATGAGACTCCAAACGTCATCATTTTCTACTCTTTTCATAAACAGATCAGGAATCCA 566
Query 38046 TAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCT 38105
||| ||| ||| | ||| | | ||| |||||| || ||| |||||| ||||
Sbjct 565 TAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTATTCTTCTTTAAATC 506
Query 38106 TAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCT 38165
|| || || ||||| || || ||||| || |||| |||||| | | ||| || || |
Sbjct 505 TAAGAACTCAAATATGTCCGCATGCCAAGGCTCTAAATAAATTGCAAATGCACCAGGGCG 446
Query 38166 TTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTAC 38225
||| | || || |||| | |||||| | || || ||||| | ||| ||||| || ||
Sbjct 445 TTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTATACACTCTCAACATTGGCAC 386
Query 38226 TATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACT 38285
|| |||||| || ||| || | || | ||| |||| ||||| ||||| || |
Sbjct 385 TAGACCATTCGAGACGCCATTAGTGCCAGCTATGTAAGAACCCTGAGCTCTGATGCAATG 326
Query 38286 TATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATC 38345
| | || ||||| ||||| ||| ||| || ||||| || || |||||||| |||||
Sbjct 325 TGTATGTAAACCTATGCCACCAGCAGATTTAGAAATTAATGCACACTGTTTTAAAGTATC 266
Query 38346 AAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGG 38405
||| |||||||| || || || || || || | || | || ||| || | || ||
Sbjct 265 AAAAATACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAAGCAAGAGGAAAGCTGTGG 206
Query 38406 CAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAA 38465
| ||| || | || || | |||||| ||| ||| | || |||| |||||||
Sbjct 205 CCGTGGTGTAGCTGCTGAGAACAGTGTAGGGCTTGCGTGTGTAAAATATTTCTCCGACAT 146
Query 38466 ATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCT 38525
|||||| || | ||| || ||| || || | ||||||||||||| || || ||
Sbjct 145 CATATTATAAGTATTGATTGCACTATCAATGTCTTCACCGTGAATACCTATTGAGACTCT 86
Query 38526 CATTAGCATATGTTGTGGTCTTTC 38549
||| ||||| ||||| ||||||||
Sbjct 85 CATAAGCATGTGTTGAGGTCTTTC 62
>seq36366
Length=4232
Score = 134 bits (148), Expect = 1e-26
Identities = 164/220 (75%), Gaps = 8/220 (4%)
Strand=Plus/Plus
Query 11890 ATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGC 11949
||| |||| |||||| || ||||||||| ||||| |||||||||| ||||||||||||
Sbjct 3234 ATCCCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGC 3293
Query 11950 TATTTGAAATCCATAGAAACATCGTGCCTCTGAACAC-TGTACATCCACATAAAATCTTT 12008
|||||||| |||||||| || | || || | ||| || || || | || | |
Sbjct 3294 AATTTGAAAACCATAGAAGCACCTGGCTTCAG-TCACTTGAACCTCTTGTGAGAAACGCT 3352
Query 12009 CCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTA 12068
| |||| |||||||| |||||||||||| || ||||| ||||||| | ||| || |
Sbjct 3353 CTACTAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGCTTGA 3412
Query 12069 TAAAGTATTTTTC---GTCTTTAGTTAATTTATCCCAATC 12105
|||| | |||||| |||| ||||| | ||||||||
Sbjct 3413 TAAAATGTTTTTCACAATCTT---TTAATGTCTCCCAATC 3449
Score = 89.7 bits (98), Expect = 5e-13
Identities = 165/240 (69%), Gaps = 4/240 (2%)
Strand=Plus/Plus
Query 11635 AAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGG 11694
||||| || | || |||| | || ||| || |||||||| || || ||||||||
Sbjct 2340 AAAATTACTAAATATACCT-CATCCCTAGAAATAAGTTCATTGCTGAAAGTCAATCCGGG 2398
Query 11695 CATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCC 11754
||||| || |||||||| | ||||||||| | |||||| || || || ||||||||
Sbjct 2399 CATCAGACCACGTTTTTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCC 2458
Query 11755 CTCCACAGCTGCAAATGCTACTACTCTTTCTCCATAT---ACCTTGTTGCTAGATATCCA 11811
|| || || ||||| || | | | ||||||| || | | ||||| |||||
Sbjct 2459 TTCAACTGCCGCAAAAGCAATAATACGTTCTCCAAATGTAGCAGTCTTGCTGCCGATCCA 2518
Query 11812 TTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAATAA 11871
| | ||||| || || ||||| ||||| || | || || || || ||||||||
Sbjct 2519 CTGTAATGCCCAGTCTGCCTTCTTCTTTACACACGGTAGAGTCTCAATTGCATTAAATAA 2578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 464822423325440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |