Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq36366 122 8e-23 >seq36366 Length=4232 Score = 122 bits (134), Expect = 8e-23 Identities = 163/225 (72%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 13894 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13951 ||||||| ||| ||||||||| || ||||| || ||||| ||||||| || ||||| Sbjct 2356 CCTCATCCCTAGAAATAAGTTCATTGCTGAAA--GTCAATCCGGGCATCAGACCACGTTT 2413 Query 13952 ttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14011 ||| ||||||||||||| |||||| || || || |||||||| |||||||| ||||| Sbjct 2414 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCTTCAACTGCCGCAAA 2473 Query 14012 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14071 || || | ||||||||||| | || | ||| | ||||| | | ||||| || Sbjct 2474 AGCAATAATACGTTCTCCAAATGTAGCAGTCTTGCTGCCGATCCACTGTAATGCCCAGTC 2533 Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14116 | || || || | | | | || ||||| ||||||||||| Sbjct 2534 TGCCTTCTTCTTTACACACGGTAGAGTCTCAATTGCATTAAATAA 2578 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 14142 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14201 || ||||| ||||| | ||| ||||| || || || | ||||||||||| || ||| Sbjct 3241 ATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGA 3300 Query 14202 AAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAA 14261 |||||||| ||||| || ||||| | | ||| || || | || | || | || Sbjct 3301 AAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCTACTAAG 3360 Query 14262 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAA 14302 || |||||||| ||||||||| ||| ||||| ||||| || Sbjct 3361 TTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAA 3401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475937093398400