Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27]
632,176 sequences; 365,010,054 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq36366 122 8e-23
>seq36366
Length=4232
Score = 122 bits (134), Expect = 8e-23
Identities = 163/225 (72%), Gaps = 4/225 (2%)
Strand=Plus/Plus
Query 13894 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13951
||||||| ||| ||||||||| || ||||| || ||||| ||||||| || |||||
Sbjct 2356 CCTCATCCCTAGAAATAAGTTCATTGCTGAAA--GTCAATCCGGGCATCAGACCACGTTT 2413
Query 13952 ttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14011
||| ||||||||||||| |||||| || || || |||||||| |||||||| |||||
Sbjct 2414 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCTTCAACTGCCGCAAA 2473
Query 14012 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14071
|| || | ||||||||||| | || | ||| | ||||| | | ||||| ||
Sbjct 2474 AGCAATAATACGTTCTCCAAATGTAGCAGTCTTGCTGCCGATCCACTGTAATGCCCAGTC 2533
Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14116
| || || || | | | | || ||||| |||||||||||
Sbjct 2534 TGCCTTCTTCTTTACACACGGTAGAGTCTCAATTGCATTAAATAA 2578
Score = 87.8 bits (96), Expect = 2e-12
Identities = 116/161 (72%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 14142 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14201
|| ||||| ||||| | ||| ||||| || || || | ||||||||||| || |||
Sbjct 3241 ATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGA 3300
Query 14202 AAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAA 14261
|||||||| ||||| || ||||| | | ||| || || | || | || | ||
Sbjct 3301 AAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCTACTAAG 3360
Query 14262 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAA 14302
|| |||||||| ||||||||| ||| ||||| ||||| ||
Sbjct 3361 TTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAA 3401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475937093398400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |