Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27]
632,176 sequences; 365,010,054 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq36366 114 1e-20
>seq36366
Length=4232
Score = 114 bits (126), Expect = 1e-20
Identities = 111/141 (79%), Gaps = 4/141 (3%)
Strand=Plus/Plus
Query 13682 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13739
||||||| ||| ||||||||| || ||||| || ||||| ||||||| || |||||
Sbjct 2356 CCTCATCCCTAGAAATAAGTTCATTGCTGAAA--GTCAATCCGGGCATCAGACCACGTTT 2413
Query 13740 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 13799
||| ||||||||||||| ||| || || || || |||||||| |||||||| |||||
Sbjct 2414 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCTTCAACTGCCGCAAA 2473
Query 13800 CGCTATTAGTCGTTCTCCAAA 13820
|| || | |||||||||||
Sbjct 2474 AGCAATAATACGTTCTCCAAA 2494
Score = 100 bits (110), Expect = 3e-16
Identities = 154/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989
|| ||||| ||||| | ||| ||||| || || || | ||||| ||||| || |||
Sbjct 3241 ATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGA 3300
Query 13990 AAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAG 14049
|||||||| || || || ||||| | | ||| ||||| | || | ||| | |||
Sbjct 3301 AAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCTACTAAG 3360
Query 14050 TTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14109
|| |||||||||||||||||| ||| ||||| ||||| || | | || ||||| | |
Sbjct 3361 TTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGCTTGATAAAATGT 3420
Query 14110 TGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCT 14149
| || || || | | | | |||||| |||| ||||
Sbjct 3421 TTTTCACAATCTTTTAATGTCTCCCAATCTGCTAGGTCCT 3460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 474806895584640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |