Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq78339 132 3e-26 seq26981 113 3e-20 seq78338 107 1e-18 seq26979 105 4e-18 seq78340 104 1e-17 seq26980 104 1e-17 seq422991 93.3 3e-14 >seq78339 Length=2434 Score = 132 bits (146), Expect = 3e-26 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||| ||||| || | || || |||||||| || ||||| || || | | || | | Sbjct 1495 CGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCG 1436 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || ||||||||||||||| ||| || |||||||| || || | || |||||||| || Sbjct 1435 TCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTG 1376 Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334 || ||| | |||||| ||| || |||||| |||| ||| |||| ||| || Sbjct 1375 TCTTGAATTTTCGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATG 1316 Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTTAT 33375 ||||| ||||| || ||||| |||||||| ||||| || || Sbjct 1315 GTTTTACCCGTGAGTGTTTTCACGAAAATCTGCATTTTGAT 1275 Score = 116 bits (128), Expect = 2e-21 Identities = 165/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| | |||| |||||||| | |||||| |||||||| |||||||| ||||| Sbjct 1964 ACCTCCTCTCAGACGCAGTACCAAATGAAGTGTCGATTCTTTTTGAATATTGTAGTCAGA 1905 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 || || | || ||||||||||| || || || | |||||| || || | || Sbjct 1904 CAGGGTGCGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGG 1845 Query 33262 TATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 ||||||||||| || | | | ||| ||||| ||| ||| ||||| || || Sbjct 1844 AATGCCTTCTTTGTCTTGGATTTTAGCC---TTTACATTTTCAATTGTGTCAGAGGCTTC 1788 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||| || | || || |||||||| || || ||||| || || |||||||| Sbjct 1787 AACTTCTAACGTAATAGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 1737 Score = 89.7 bits (98), Expect = 3e-13 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||| || |||| || | ||| | || ||||| ||||| || ||||| || || Sbjct 2192 ACCACCTCGCAAACGCAGTACTAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCTGA 2133 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | | || ||||||||||| || ||| || | |||||| || || | ||| Sbjct 2132 TAAAGTACGCCCATCTTCCAATTGCTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGG 2073 Query 33262 TATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 ||||| ||||| || |||| ||| ||||| ||| ||| ||||| || | Sbjct 2072 AATGCCCTCTTTATCTTGAATCTTAGCC---TTTACATTTTCAATGGTGTCAGATGGCTC 2016 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| ||||| || || || || || || || || || |||||||| Sbjct 2015 CACCTCCAGGGTTATAGTCTTGCCTGTTAGGGTCTTAACAAATATTTGCAT 1965 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/231 (68%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 |||||| | | ||||| || ||||| | || || || ||||| ||||| |||||||| Sbjct 1736 ACCGCCACGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGA 1677 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 || | | || ||||||||||||||| ||| || | | || ||||| | ||| Sbjct 1676 TAATGTACGGCCATCTTCCAATTGCTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGG 1617 Query 33262 TATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 || |||||||| || | | | ||| || || ||| ||| ||||| || | Sbjct 1616 AATACCTTCTTTGTCTTGGATCTTTGCC---TTCACGTTTTCAATTGTGTCAGAAGGCTC 1560 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || | || || |||||||| |||||||| || || || || ||||| Sbjct 1559 TACTTCTAACGTGATGGTTTTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 1509 >seq26981 Length=233 Score = 113 bits (124), Expect = 3e-20 Identities = 162/227 (71%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 33146 CCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAA 33205 |||||||| || | || |||||||| || || |||||||| |||||||| ||||| | Sbjct 233 CCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGT 174 Query 33206 TTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATG 33265 | || || ||||||||||| || || || | |||||| || || | || ||| Sbjct 173 GTACGTCCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGAATG 114 Query 33266 CCTTCTTTTTCGCTAA---TCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322 |||||||| || || | ||| ||||| ||| ||| ||||| || || ||| Sbjct 113 CCTTCTTTGTCTTGAATTTTAGCC---TTTACATTTTCAATTGTGTCAGAGGCTTCAACT 57 Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || | || || |||||||| ||||| ||||| || || |||||||| Sbjct 56 TCTAATGTAATTGTTTTTCCAGTAAGTGTTTTGACAAAGATTTGCAT 10 >seq78338 Length=1389 Score = 107 bits (118), Expect = 1e-18 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||| | |||| |||||||| | ||| || |||||||| |||||||| ||||| Sbjct 255 ACCTCCTCGCAGACGCAGTACCAAATGAAGTGTGGATTCTTTTTGAATATTGTAGTCAGA 196 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 || || | || ||||||||||| || || || | |||||| || || | || Sbjct 195 CAGGGTGCGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCAGGTGG 136 Query 33262 TATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 ||||||||||| || | | | || |||||| ||| ||| ||||| ||| | Sbjct 135 GATGCCTTCTTTGTCTTGGATTTTAGC---TTTTACATTTTCAATAGTGTCAGAGGGCTC 79 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| || || || ||||| || || ||||| || ||||| ||||| Sbjct 78 CACTTCCAGGGTAATAGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 28 Score = 105 bits (116), Expect = 4e-18 Identities = 152/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATC 33219 ||| || |||| |||||||||||||| |||||||||||||||||| || | || || Sbjct 465 CACTAAGTGCAGAGTCGACTCTTTTTGAATATTGTAATCAGACAAAGTGCGACCATCTTC 406 Query 33220 CAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCT 33279 ||||||||| ||| ||| || | ||| || ||||| | ||| ||||| || || || Sbjct 405 CAATTGCTTACCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTG 346 Query 33280 AATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGT 33336 ||| ||| || || | | ||| ||||| |||| || ||||| || || || Sbjct 345 TATCTTAGCC---TTCACATTCTCAATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGT 289 Query 33337 TTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || || || || || || |||||||| Sbjct 288 CTTGCCTGTTAGGGTCTTGACAAATATTTGCAT 256 >seq26979 Length=899 Score = 105 bits (116), Expect = 4e-18 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || || |||| |||||||| || ||||| || || || ||||| ||||| ||||| ||| Sbjct 305 CCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCCTTTTGGATATTATAATCTGAC 246 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 | || || || |||| |||||||||| || || | | ||| || || | || Sbjct 245 AGTGTGCGTCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCTGGAGGA 186 Query 33263 ATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGA 33319 |||||||| || || |||| |||| | || ||| ||| || || | || Sbjct 185 ATGCCTTCCTTGTCTTGAATCTTTGCCT---TAACATTTTCAATTGTATCAGAAGCTTCC 129 Query 33320 ACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || | ||| ||||||||||| || || |||||||| ||||||||||| Sbjct 128 ACTTCTAAAGTAATCGTTTTTCCAGTCAGTGTTTTTACAAAAATTTGCAT 79 Score = 104 bits (114), Expect = 1e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || ||||||| ||||| ||||| ||||| || || |||||||| |||||||| || ||| Sbjct 761 CCACCTCTTAGCCGCAGTACCAAGTGCAAGGTAGATTCTTTTTGAATATTGTAGTCTGAC 702 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 ||| || || || || | ||| || ||| ||| || | | || ||||| | ||| Sbjct 701 AAAGTGCGTCCATCTTCAAGTTGTTTCCCAGCAAAAATAAGCCTCTGTTGGTCTGGGGGA 642 Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322 || || || || || ||| ||| || ||| ||| ||||| || | ||| Sbjct 641 ATCCCCTCCTTATCTTGAATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAACT 582 Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || || || || || ||||| ||||| || ||||||||||| Sbjct 581 TCAAGGGTAATAGTCTTGCCAGTAAGTGTTTTAACAAAAATTTGCAT 535 >seq78340 Length=230 Score = 104 bits (114), Expect = 1e-17 Identities = 160/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 33146 CCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAA 33205 |||||||| || | || ||||| || || || |||||||| |||||||| ||||| | Sbjct 230 CCTCTTAAACGAAGTACTAAATGTAAAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGT 171 Query 33206 TTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATG 33265 | | || ||||||||||| || || || | |||||| || || | || ||| Sbjct 170 GTACGACCATCTTCCAATTGCTTGCCTGCGAAAATAAGACGTTGTTGATCTGGAGGAATG 111 Query 33266 CCTTCTTTTTCGCTAA---TCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322 |||||||| || || | ||| ||||| ||| ||| ||||| || || ||| Sbjct 110 CCTTCTTTATCTTGAATTTTAGCC---TTTACATTTTCAATTGTGTCAGAGGCTTCAACT 54 Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || | || || |||||||| ||||| ||||| || || |||||||| Sbjct 53 TCTAATGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAGATTTGCAT 7 >seq26980 Length=2195 Score = 104 bits (114), Expect = 1e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || ||||| | |||| |||||||| || || || ||||| || |||||||| || ||| Sbjct 1868 CCACCTCTCAGGCGCAGTACCAAATGTAAGGTAGATTCTTTCTGAATATTGTAGTCTGAC 1809 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 | || || || || | |||||||||| ||| || | | |||||| || | ||| Sbjct 1808 AGTGTGCGTCCATCTTCAAGTTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 1749 Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322 || || || || || |||| | ||| || ||| ||| || || || | ||| Sbjct 1748 ATACCCTCCTTATCCTGAATCTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACT 1689 Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||||| || || ||||| || || || || ||||| ||||||||||| Sbjct 1688 TCCAGTGTGATAGTTTTGCCAGTTAGTGTCTTTACAAAAATTTGCAT 1642 >seq422991 Length=614 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 33154 CCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTG 33213 ||| | ||| | ||| ||||| || || ||||| || ||||| |||||||| | || Sbjct 28 CCGAAGCACAAGATGTAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCC 87 Query 33214 GTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT 33273 || || | || || ||| ||| || || ||||||||||| | || || ||||| || Sbjct 88 ATCTTCTAGCTGTTTACCAGCAAAGATCAATCGTTGCTGGTCTGGTGGAATACCTTCCTT 147 Query 33274 TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTAT 33333 || ||| |||||| ||| || || || || || || || || || || Sbjct 148 ATCTTGGATCTTAGCTTTTACATTTTCTATAGTATCAGAGGCTTCCACCTCAAGGGTAAT 207 Query 33334 CGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||||| |||||||| || || |||||||||||||| Sbjct 208 GGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 316321531758048