Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq78339 107 1e-18 seq26980 93.3 3e-14 seq422991 91.5 1e-13 seq78340 84.2 2e-11 seq78338 84.2 2e-11 >seq78339 Length=2434 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969 || || |||||||| || || ||||||||||||||||| |||| ||| |||| Sbjct 1720 AATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCATCT 1661 Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029 |||||||| ||||| ||||| || | || || ||||| | || | ||||||||| ||| Sbjct 1660 TCCAATTGCTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTGTCT 1601 Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089 || ||| || || | ||| || || | ||||| || || | ||| || ||| Sbjct 1600 TGGATCTTTGCCTTCACGTTTTCAATTGTGTCAGAAGGCTCTACTTCTAACGTGATGGTT 1541 Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || || | |||||| ||||| || ||||| Sbjct 1540 TTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 1509 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/230 (70%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTA-ATTGACGCTCATC 43968 || ||||| || || || ||||||||||| || || ||| | | || || | || Sbjct 1492 AATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTG-CGGCCGTC 1434 Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028 |||||||| ||||| ||||| ||||| ||||| || || |||| | ||||| || || Sbjct 1433 TTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTC 1374 Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088 | |||||| ||| || | | | ||| || | || || || || | ||||| || Sbjct 1373 TTGAATTTTCGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGT 1314 Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCATGTCGAGTCTTTGTAACA 44138 |||||| || | || ||||| || || ||||| | || | | ||||||| Sbjct 1313 TTTACCCGTGAGTGTTTTCACGAAAATCTGCATTTTGA-TATCTGTAACA 1265 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| |||| ||| | | || | ||| || ||| ||| ||||| || || || || Sbjct 2192 ACCACCTCGCAAACGCAGTACTAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCTGA 2133 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 ||| |||| |||| |||||||| || || ||||| || | ||||| || || | || Sbjct 2132 TAAAGTACGCCCATCTTCCAATTGCTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGG 2073 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | || ||||||||| ||| || || || | ||| || || | |||||||| Sbjct 2072 AATGCCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCAC 2013 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || || || || |||| ||||| |||||||||||||| Sbjct 2012 CTCCAGGGTTATAGTCTTGCCTGTTAGGGTCTTAACAAATATTTGCAT 1965 >seq26980 Length=2195 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990 || || |||||||||||||| | | ||| |||| |||| |||||||||||||| Sbjct 1604 TCCTTCTGAATATTATAATCTGACAGTGTACGTCCATCTTCCAGCTGTTTTCCTGCAAAA 1545 Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050 || | || || ||||| |||| | ||||||||| ||| ||||||| || || | Sbjct 1544 ATTAGCCTCTGTTGGTCAGGAGGGATACCTTCTTTGTCTTGAATTTTTGCCTTAACATTT 1485 Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110 | | ||||| | | || || || | || || ||||| || || || ||||| ||| Sbjct 1484 TCTATTGTATCAGAAGCTTCTACTTCCAATGTGATGGTTTTGCCAGTCAATGTCTTTACA 1425 Query 44111 AATATTTGCAT 44121 || |||||||| Sbjct 1424 AAAATTTGCAT 1414 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 || ||||||| | | || ||||||| || || ||||| |||||||| ||| Sbjct 2096 CCACCTCTCAGACGCAGTACTAAATGTAAAGTAGATTCCTTTTGTATATTATAGTCGGAG 2037 Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014 | | || |||| || | ||||||||||||||| || | || ||| || || |||| Sbjct 2036 AGTGTGCGTCCATCTTCAAGTTGTTTTCCTGCAAAAATAAGCCTTTGTTGATCTGGAGGA 1977 Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074 | ||||||||||| ||| || ||||| | ||| || || | | ||||| Sbjct 1976 ATGCCTTCTTTATCCTGAATCTTGGCCTTGACATTTTCAATTGTGTCAGAAGCTTCCACT 1917 Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| ||||| || || | ||||||||||| |||||||| Sbjct 1916 TCTAAAGTAATAGTTTTGCCAGTAAGTGTCTTCACAAAAATTTGCAT 1870 >seq422991 Length=614 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTC 43971 ||| | ||||| ||| || |||||||| || || || ||| ||| |||| || Sbjct 34 CACAAGATGTAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTC 93 Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031 | ||||| || ||||| ||||| ||||||||||| | || | |||||| |||||| Sbjct 94 TAGCTGTTTACCAGCAAAGATCAATCGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTG 153 Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091 || || ||| || | | | |||||| | | ||||| || | ||||| ||||| Sbjct 154 GATCTTAGCTTTTACATTTTCTATAGTATCAGAGGCTTCCACCTCAAGGGTAATGGTTTT 213 Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||| || | ||||| || || |||||||| Sbjct 214 ACCCGTAAGGGTCTTGACGAAAATTTGCAT 243 >seq78340 Length=230 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 || ||||||| || |||||||||||||| || || | | ||| |||| ||| Sbjct 215 ACTAAATGTAAAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGTGTACGACCATCTTCC 156 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 ||||| || ||||| || || | ||||| || || |||| | |||||||||||| | Sbjct 155 AATTGCTTGCCTGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTATCTTGA 96 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 ||||| || || | ||| || || | | || || || | ||||||||||| Sbjct 95 ATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAATGTAATTGTTTTT 36 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || | || || ||||| |||||||| Sbjct 35 CCAGTAAGTGTTTTAACAAAGATTTGCAT 7 >seq78338 Length=1389 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTA-ATTGACGCTCATCGTC 43971 ||||| || || ||| |||||| || ||||| || || | | || || |||| || Sbjct 692 ACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGAGTGCGGC-CATCTTC 634 Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031 | || || |||||||| || | ||||| || || |||| | |||||||| ||| Sbjct 633 AAGCTGCTTGCCTGCAAAGATGAGACGTTGTTGATCTGGAGGAATTCCTTCTTTGTCTTG 574 Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091 ||| || ||| || | ||| |||||| | ||||| || || | || |||||||| Sbjct 573 AATCTTAGCTTTAACATTTTCAATAGTATCAGATGGCTCAACTTCCAAGGTTATTGTTTT 514 Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || | || || |||||||||||||| Sbjct 513 GCCAGTAAGTGTTTTGACAAATATTTGCAT 484 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 |||||||| || | | |||||||| || ||| |||||||||||||| || || Sbjct 255 ACCTCCTCGCAGACGCAGTACCAAATGAAGTGTGGATTCTTTTTGAATATTGTAGTCAGA 196 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 | || |||| |||||||| || || || || || | ||||| || || | || Sbjct 195 CAGGGTGCGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCAGGTGG 136 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||||| ||| ||||| ||| || | ||| ||| || | |||||||| Sbjct 135 GATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTGTCAGAGGGCTCCAC 76 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| || || || |||| || || ||||| || ||||| Sbjct 75 TTCCAGGGTAATAGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 28 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 352044164538048