Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27]
632,176 sequences; 365,010,054 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq78339 107 1e-18
seq26980 93.3 3e-14
seq422991 91.5 1e-13
seq78340 84.2 2e-11
seq78338 84.2 2e-11
>seq78339
Length=2434
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969
|| || |||||||| || || ||||||||||||||||| |||| ||| ||||
Sbjct 1720 AATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCATCT 1661
Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029
|||||||| ||||| ||||| || | || || ||||| | || | ||||||||| |||
Sbjct 1660 TCCAATTGCTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTGTCT 1601
Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089
|| ||| || || | ||| || || | ||||| || || | ||| || |||
Sbjct 1600 TGGATCTTTGCCTTCACGTTTTCAATTGTGTCAGAAGGCTCTACTTCTAACGTGATGGTT 1541
Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| || || | |||||| ||||| || |||||
Sbjct 1540 TTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 1509
Score = 89.7 bits (98), Expect = 4e-13
Identities = 160/230 (70%), Gaps = 3/230 (1%)
Strand=Plus/Minus
Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTA-ATTGACGCTCATC 43968
|| ||||| || || || ||||||||||| || || ||| | | || || | ||
Sbjct 1492 AATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTG-CGGCCGTC 1434
Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028
|||||||| ||||| ||||| ||||| ||||| || || |||| | ||||| || ||
Sbjct 1433 TTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTC 1374
Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088
| |||||| ||| || | | | ||| || | || || || || | ||||| ||
Sbjct 1373 TTGAATTTTCGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGT 1314
Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCATGTCGAGTCTTTGTAACA 44138
|||||| || | || ||||| || || ||||| | || | | |||||||
Sbjct 1313 TTTACCCGTGAGTGTTTTCACGAAAATCTGCATTTTGA-TATCTGTAACA 1265
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| |||| ||| | | || | ||| || ||| ||| ||||| || || || ||
Sbjct 2192 ACCACCTCGCAAACGCAGTACTAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCTGA 2133
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
||| |||| |||| |||||||| || || ||||| || | ||||| || || | ||
Sbjct 2132 TAAAGTACGCCCATCTTCCAATTGCTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGG 2073
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| || ||||||||| ||| || || || | ||| || || | ||||||||
Sbjct 2072 AATGCCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCAC 2013
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | || || || || || |||| ||||| ||||||||||||||
Sbjct 2012 CTCCAGGGTTATAGTCTTGCCTGTTAGGGTCTTAACAAATATTTGCAT 1965
>seq26980
Length=2195
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990
|| || |||||||||||||| | | ||| |||| |||| ||||||||||||||
Sbjct 1604 TCCTTCTGAATATTATAATCTGACAGTGTACGTCCATCTTCCAGCTGTTTTCCTGCAAAA 1545
Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050
|| | || || ||||| |||| | ||||||||| ||| ||||||| || || |
Sbjct 1544 ATTAGCCTCTGTTGGTCAGGAGGGATACCTTCTTTGTCTTGAATTTTTGCCTTAACATTT 1485
Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110
| | ||||| | | || || || | || || ||||| || || || ||||| |||
Sbjct 1484 TCTATTGTATCAGAAGCTTCTACTTCCAATGTGATGGTTTTGCCAGTCAATGTCTTTACA 1425
Query 44111 AATATTTGCAT 44121
|| ||||||||
Sbjct 1424 AAAATTTGCAT 1414
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954
|| ||||||| | | || ||||||| || || ||||| |||||||| |||
Sbjct 2096 CCACCTCTCAGACGCAGTACTAAATGTAAAGTAGATTCCTTTTGTATATTATAGTCGGAG 2037
Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014
| | || |||| || | ||||||||||||||| || | || ||| || || ||||
Sbjct 2036 AGTGTGCGTCCATCTTCAAGTTGTTTTCCTGCAAAAATAAGCCTTTGTTGATCTGGAGGA 1977
Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074
| ||||||||||| ||| || ||||| | ||| || || | | |||||
Sbjct 1976 ATGCCTTCTTTATCCTGAATCTTGGCCTTGACATTTTCAATTGTGTCAGAAGCTTCCACT 1917
Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | ||||| ||||| || || | ||||||||||| ||||||||
Sbjct 1916 TCTAAAGTAATAGTTTTGCCAGTAAGTGTCTTCACAAAAATTTGCAT 1870
>seq422991
Length=614
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTC 43971
||| | ||||| ||| || |||||||| || || || ||| ||| |||| ||
Sbjct 34 CACAAGATGTAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTC 93
Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031
| ||||| || ||||| ||||| ||||||||||| | || | |||||| ||||||
Sbjct 94 TAGCTGTTTACCAGCAAAGATCAATCGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTG 153
Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091
|| || ||| || | | | |||||| | | ||||| || | ||||| |||||
Sbjct 154 GATCTTAGCTTTTACATTTTCTATAGTATCAGAGGCTTCCACCTCAAGGGTAATGGTTTT 213
Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
||| || | ||||| || || ||||||||
Sbjct 214 ACCCGTAAGGGTCTTGACGAAAATTTGCAT 243
>seq78340
Length=230
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972
|| ||||||| || |||||||||||||| || || | | ||| |||| |||
Sbjct 215 ACTAAATGTAAAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGTGTACGACCATCTTCC 156
Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032
||||| || ||||| || || | ||||| || || |||| | |||||||||||| |
Sbjct 155 AATTGCTTGCCTGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTATCTTGA 96
Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092
||||| || || | ||| || || | | || || || | |||||||||||
Sbjct 95 ATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAATGTAATTGTTTTT 36
Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| || | || || ||||| ||||||||
Sbjct 35 CCAGTAAGTGTTTTAACAAAGATTTGCAT 7
>seq78338
Length=1389
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTA-ATTGACGCTCATCGTC 43971
||||| || || ||| |||||| || ||||| || || | | || || |||| ||
Sbjct 692 ACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGAGTGCGGC-CATCTTC 634
Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031
| || || |||||||| || | ||||| || || |||| | |||||||| |||
Sbjct 633 AAGCTGCTTGCCTGCAAAGATGAGACGTTGTTGATCTGGAGGAATTCCTTCTTTGTCTTG 574
Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091
||| || ||| || | ||| |||||| | ||||| || || | || ||||||||
Sbjct 573 AATCTTAGCTTTAACATTTTCAATAGTATCAGATGGCTCAACTTCCAAGGTTATTGTTTT 514
Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| || | || || ||||||||||||||
Sbjct 513 GCCAGTAAGTGTTTTGACAAATATTTGCAT 484
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
|||||||| || | | |||||||| || ||| |||||||||||||| || ||
Sbjct 255 ACCTCCTCGCAGACGCAGTACCAAATGAAGTGTGGATTCTTTTTGAATATTGTAGTCAGA 196
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
| || |||| |||||||| || || || || || | ||||| || || | ||
Sbjct 195 CAGGGTGCGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCAGGTGG 136
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| |||||||| ||| ||||| ||| || | ||| ||| || | ||||||||
Sbjct 135 GATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTGTCAGAGGGCTCCAC 76
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | ||||| || || || |||| || || ||||| || |||||
Sbjct 75 TTCCAGGGTAATAGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 28
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 352044164538048
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