Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq19446 172 5e-38 >seq19446 Length=4212 Score = 172 bits (190), Expect = 5e-38 Identities = 595/912 (65%), Gaps = 31/912 (3%) Strand=Plus/Plus Query 30289 CCCAACCTTACGCATCTTTTGTATGGCTTTGTGCCTCTCTGCGGTGGAGATGGTATAAAC 30348 || || ||||| ||| | | || |||||| | || | ||||| || || || || || Sbjct 1715 CCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAAT 1774 Query 30349 GATAGCTTAAAGCA-AGTGCCGG--GTTCGTTTGAGGCTTTACAAAAATCTTGCGCGGGT 30405 || |||||||| | | || || ||| || | || | || || ||| || Sbjct 1775 GACAGCTTAAAAGAGATTGAAGGCAGTT---TTCAAGCACTGCAGCGGTCCTGCAGCGGC 1831 Query 30406 CGAGAGGATTTTAAAGTGACGATTCACGATATTTGGGGCGCTCTTCAAAAACCACAAAAA 30465 || ||||| || ||||| | || |||||| |||| || | ||||||||||||||| Sbjct 1832 CGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAA 1891 Query 30466 GGAGTGGGCGCTTGGGACGATCCGTATAAAGGAAATTTTGGCCAACTGATGGCGATTAAA 30525 ||| || | ||| |||| || || ||||| || ||||||||| | ||| | |||||| Sbjct 1892 GGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTC-ATTAAA 1950 Query 30526 AGACACAATCCC-GACCTTACGATTTTACCGTCTATTGGCGGGTGGACACTTAGCGACCC 30584 | | | ||| || | | |||| | || |||||||| |||||||| ||| || || Sbjct 1951 ACAAGCTCGCCCTGAATTAAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCTGATCC 2010 Query 30585 TTTCTTTAAATTGAGTTCTGCCGA-AAATC-----GCGC-CGTTTTCGTTGAGTCCGCAC 30637 |||||| || || || || ||||| | | || ||| || |||| | | Sbjct 2011 TTTCTTC---TT---TTTTGTTGACAAATCTAAGAGAACACGATTT-GTGCAGTCAGTAA 2063 Query 30638 GAGAGTATTTGCGCACATGGAAATTTTTTGACGGACTAGACATCGACTGGGAGTTTCCGG 30697 |||| | | ||||||||||| || || || | || ||||| |||||||| || | Sbjct 2064 AGGAGTTCCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTG 2123 Query 30698 GCGGTAAAGGTGCTAATCCCGAATTAGGAGATCCAGAAAAGGATGGAGTAACATATGTGC 30757 | || ||||||||||| || || | || |||||| ||||| | ||||| Sbjct 2124 GTGGCAAAGGTGCTAACCCTGATCTCGGTAGCCCAGAA---GATGGTGATTGCTATGTAA 2180 Query 30758 AGTTATTGAAAGAGCTCAGAGAAATGCTAAACGATCTTTC--TAAAGAAACAGGGAAAAA 30815 || ||||||| | | || ||||| | || || || ||||| || || || Sbjct 2181 GTTTGATGAAAGAATTACGTGAGATGCTCGATGAACTCTCAGCTAAGAA--TGGTAAGAA 2238 Query 30816 ATACCAGCTCACCTCGGCGATTAGCGCGGGGTACGATAAAATCTCTATAGTTAATTATGA 30875 |||| | | || || || |||||||| || | ||||||||| | ||| | || | Sbjct 2239 ATACGAATTAACTTCTGCTATTAGCGCTGGATGGGATAAAATCCAAGTCGTTGACTACGG 2298 Query 30876 AAATGCGCAAGAGTATCTTGATCACATTTTTGTTATGACGTACGATTTTAAAGGCGCTTG 30935 || || ||| | ||| | ||||| ||||| | |||| || || || || || || || Sbjct 2299 CAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTATGACTTCAAGGGAGCCTG 2358 Query 30936 GTCTAACACGGACT-TGGGATATCACACTACACTTTATTCACCCTCTTGGAACGCTGAAG 30994 ||| ||| ||| | ||| |||| || || | || | || | ||||| | | | Sbjct 2359 GTCAAAC-GATACTCTTGGACATCAAACACCATTGTACGCGCCTGCATGGAATCCCAAGG 2417 Query 30995 AAAAATATACTGCCGAGTACGCGACAAAGGAGTTGTTAAAACAAAACGTCAATAGTAAGA 31054 ||| || || | || | || ||| | ||||| ||| || ||| ||||| Sbjct 2418 AAACCTACACATCTGACTTCGGAGTAAAATACTTGTTGGCACAGGGAGTGAATCCTAAGA 2477 Query 31055 AAATAGTGCTAGCTGTTGCAATGTACGGAAGAGGGTGGACGGGTGTGCATGACATAAAAA 31114 | || || | | |||||| ||||| || | || ||||| || || ||||| || Sbjct 2478 AGATTGTAGTCGGTGTTGCTATGTATGGTCGTGGCTGGACTGGCGTCCATGATTACGAAG 2537 Query 31115 ACAACAATCCCTTTACGGGTGTAGCTCAGGGGCCGATTAAAGGAACTTGGGAAAGTGGAG 31174 |||||| |||||| || || ||| || || | ||||| |||||| || |||| Sbjct 2538 ACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGTACTTGGCAAGACGGAG 2597 Query 31175 TTGTAGATTACA 31186 | || || |||| Sbjct 2598 TGGTTGACTACA 2609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418005609048176