Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27]
632,176 sequences; 365,010,054 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq19446 172 5e-38
>seq19446
Length=4212
Score = 172 bits (190), Expect = 5e-38
Identities = 595/912 (65%), Gaps = 31/912 (3%)
Strand=Plus/Plus
Query 30289 CCCAACCTTACGCATCTTTTGTATGGCTTTGTGCCTCTCTGCGGTGGAGATGGTATAAAC 30348
|| || ||||| ||| | | || |||||| | || | ||||| || || || || ||
Sbjct 1715 CCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAAT 1774
Query 30349 GATAGCTTAAAGCA-AGTGCCGG--GTTCGTTTGAGGCTTTACAAAAATCTTGCGCGGGT 30405
|| |||||||| | | || || ||| || | || | || || ||| ||
Sbjct 1775 GACAGCTTAAAAGAGATTGAAGGCAGTT---TTCAAGCACTGCAGCGGTCCTGCAGCGGC 1831
Query 30406 CGAGAGGATTTTAAAGTGACGATTCACGATATTTGGGGCGCTCTTCAAAAACCACAAAAA 30465
|| ||||| || ||||| | || |||||| |||| || | |||||||||||||||
Sbjct 1832 CGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAA 1891
Query 30466 GGAGTGGGCGCTTGGGACGATCCGTATAAAGGAAATTTTGGCCAACTGATGGCGATTAAA 30525
||| || | ||| |||| || || ||||| || ||||||||| | ||| | ||||||
Sbjct 1892 GGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTC-ATTAAA 1950
Query 30526 AGACACAATCCC-GACCTTACGATTTTACCGTCTATTGGCGGGTGGACACTTAGCGACCC 30584
| | | ||| || | | |||| | || |||||||| |||||||| ||| || ||
Sbjct 1951 ACAAGCTCGCCCTGAATTAAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCTGATCC 2010
Query 30585 TTTCTTTAAATTGAGTTCTGCCGA-AAATC-----GCGC-CGTTTTCGTTGAGTCCGCAC 30637
|||||| || || || || ||||| | | || ||| || |||| | |
Sbjct 2011 TTTCTTC---TT---TTTTGTTGACAAATCTAAGAGAACACGATTT-GTGCAGTCAGTAA 2063
Query 30638 GAGAGTATTTGCGCACATGGAAATTTTTTGACGGACTAGACATCGACTGGGAGTTTCCGG 30697
|||| | | ||||||||||| || || || | || ||||| |||||||| || |
Sbjct 2064 AGGAGTTCCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTG 2123
Query 30698 GCGGTAAAGGTGCTAATCCCGAATTAGGAGATCCAGAAAAGGATGGAGTAACATATGTGC 30757
| || ||||||||||| || || | || |||||| ||||| | |||||
Sbjct 2124 GTGGCAAAGGTGCTAACCCTGATCTCGGTAGCCCAGAA---GATGGTGATTGCTATGTAA 2180
Query 30758 AGTTATTGAAAGAGCTCAGAGAAATGCTAAACGATCTTTC--TAAAGAAACAGGGAAAAA 30815
|| ||||||| | | || ||||| | || || || ||||| || || ||
Sbjct 2181 GTTTGATGAAAGAATTACGTGAGATGCTCGATGAACTCTCAGCTAAGAA--TGGTAAGAA 2238
Query 30816 ATACCAGCTCACCTCGGCGATTAGCGCGGGGTACGATAAAATCTCTATAGTTAATTATGA 30875
|||| | | || || || |||||||| || | ||||||||| | ||| | || |
Sbjct 2239 ATACGAATTAACTTCTGCTATTAGCGCTGGATGGGATAAAATCCAAGTCGTTGACTACGG 2298
Query 30876 AAATGCGCAAGAGTATCTTGATCACATTTTTGTTATGACGTACGATTTTAAAGGCGCTTG 30935
|| || ||| | ||| | ||||| ||||| | |||| || || || || || || ||
Sbjct 2299 CAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTATGACTTCAAGGGAGCCTG 2358
Query 30936 GTCTAACACGGACT-TGGGATATCACACTACACTTTATTCACCCTCTTGGAACGCTGAAG 30994
||| ||| ||| | ||| |||| || || | || | || | ||||| | | |
Sbjct 2359 GTCAAAC-GATACTCTTGGACATCAAACACCATTGTACGCGCCTGCATGGAATCCCAAGG 2417
Query 30995 AAAAATATACTGCCGAGTACGCGACAAAGGAGTTGTTAAAACAAAACGTCAATAGTAAGA 31054
||| || || | || | || ||| | ||||| ||| || ||| |||||
Sbjct 2418 AAACCTACACATCTGACTTCGGAGTAAAATACTTGTTGGCACAGGGAGTGAATCCTAAGA 2477
Query 31055 AAATAGTGCTAGCTGTTGCAATGTACGGAAGAGGGTGGACGGGTGTGCATGACATAAAAA 31114
| || || | | |||||| ||||| || | || ||||| || || ||||| ||
Sbjct 2478 AGATTGTAGTCGGTGTTGCTATGTATGGTCGTGGCTGGACTGGCGTCCATGATTACGAAG 2537
Query 31115 ACAACAATCCCTTTACGGGTGTAGCTCAGGGGCCGATTAAAGGAACTTGGGAAAGTGGAG 31174
|||||| |||||| || || ||| || || | ||||| |||||| || ||||
Sbjct 2538 ACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGTACTTGGCAAGACGGAG 2597
Query 31175 TTGTAGATTACA 31186
| || || ||||
Sbjct 2598 TGGTTGACTACA 2609
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418005609048176
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |