Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq546043 129 3e-25 seq233726 127 1e-24 seq123274 127 1e-24 seq382360 125 4e-24 seq318708 123 1e-23 seq251241 123 1e-23 seq112368 123 1e-23 seq237365 122 5e-23 seq12160 120 2e-22 seq416187 116 2e-21 seq237302 114 7e-21 seq161747 114 7e-21 seq18591 113 2e-20 seq128384 109 3e-19 seq316145 82.4 4e-11 >seq546043 Length=908 Score = 129 bits (142), Expect = 3e-25 Identities = 84/92 (91%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 11439 TTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 |||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||| Sbjct 226 TTAATAAAAAAT--ATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGC 169 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||||| ||||||||||||||||||||| Sbjct 168 ACGACGCTCTAACCAACTGAGCTAATGGGCCG 137 >seq233726 Length=1024 Score = 127 bits (140), Expect = 1e-24 Identities = 86/96 (90%), Gaps = 2/96 (2%) Strand=Plus/Plus Query 11437 AATTAATAAAAA--ATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 || ||||||||| || || ||||||||||| |||||||||| ||||||||||||||| Sbjct 195 AAATAATAAAAATAATAAATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTAT 254 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||||||||| ||||||||||||||||||||| Sbjct 255 TAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 290 >seq123274 Length=966 Score = 127 bits (140), Expect = 1e-24 Identities = 88/97 (91%), Gaps = 4/97 (4%) Strand=Plus/Minus Query 11440 TAATAAAAAATCAAA--TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 |||||||||| |||| ||||||||||| |||||||||| |||||||||||||||||| Sbjct 953 TAATAAAAAA-CAAACGTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAG 895 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCC-GTCG 11533 ||||||||||| |||||||||||||||||||| |||| Sbjct 894 CACGACGCTCTAACCAACTGAGCTAATGGGCCAGTCG 858 >seq382360 Length=389 Score = 125 bits (138), Expect = 4e-24 Identities = 82/90 (91%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||||| || ||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 230 AATAAAAAAG-AAGTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 288 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||| ||||||||||||||||||||| Sbjct 289 GACGCTCTAACCAACTGAGCTAATGGGCCG 318 >seq318708 Length=235 Score = 123 bits (136), Expect = 1e-23 Identities = 80/87 (92%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||||| | |||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 150 TAAAAAAT-ATATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 208 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||||||||| Sbjct 209 CGCTCTAACCAACTGAGCTAATGGGCC 235 >seq251241 Length=1653 Score = 123 bits (136), Expect = 1e-23 Identities = 87/99 (88%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 11433 ATAGAATTAATAAAAAATCA--AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCG 11490 ||||| |||| |||| | | ||||||||||||| |||||||||| ||||||||||| Sbjct 1193 ATAGATTTAAAAAAATAAAATGAATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCG 1252 Query 11491 TTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||| |||||||||||||||||||| Sbjct 1253 TTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 1291 >seq112368 Length=458 Score = 123 bits (136), Expect = 1e-23 Identities = 78/85 (92%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 147 AAAAACGAAATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACG 206 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||||||||| Sbjct 207 CTCTAACCAACTGAGCTAATGGGCC 231 >seq237365 Length=571 Score = 122 bits (134), Expect = 5e-23 Identities = 74/79 (94%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||| || Sbjct 13 AAATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 72 Query 11512 CAACTGAGCTAATGGGCCG 11530 ||||||||||||||||||| Sbjct 73 CAACTGAGCTAATGGGCCG 91 >seq12160 Length=960 Score = 120 bits (132), Expect = 2e-22 Identities = 80/89 (90%), Gaps = 3/89 (3%) Strand=Plus/Minus Query 11444 AAAAAATCAAA---TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||| ||| ||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 304 AAAAAATAAAACGTTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 245 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 244 GACGCTCTAACCAACTGAGCTAATGGGCC 216 >seq416187 Length=234 Score = 116 bits (128), Expect = 2e-21 Identities = 85/98 (87%), Gaps = 5/98 (5%) Strand=Plus/Minus Query 11434 TAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTA 11493 || |||||| ||||||| ||||||||||| ||||||||| |||||||||||||| Sbjct 98 TAAAATTAA--AAAAATC---TTGGCCCATGAGGAGATCGAACCCGCGACCTTCGCGTTA 44 Query 11494 TTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 ||||||||||||| | |||||||||||||||||||||| Sbjct 43 TTAGCACGACGCTTTAACCAACTGAGCTAATGGGCCGT 6 >seq237302 Length=381 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 199 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 258 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 259 TGAGCTAATGGGCCG 273 >seq161747 Length=559 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 348 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 407 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 408 TGAGCTAATGGGCCG 422 >seq18591 Length=743 Score = 113 bits (124), Expect = 2e-20 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 500 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 559 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 560 TGAGCTAATGGGCC 573 >seq128384 Length=418 Score = 109 bits (120), Expect = 3e-19 Identities = 67/72 (93%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 11459 CCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGA 11518 ||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 418 CCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGA 359 Query 11519 GCTAATGGGCCG 11530 |||||||||||| Sbjct 358 GCTAATGGGCCG 347 >seq316145 Length=411 Score = 82.4 bits (90), Expect = 4e-11 Identities = 68/82 (83%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 || || ||||| |||||||| || ||| ||||||||||||||||||||||| ||||| Sbjct 323 TTTGCTCATGAGGGGATCGAAGCTGTGACTTTCGCGTTATTAGCACGACGCTCATACCAA 264 Query 11515 CTGAGCTAATGGGCCG-TCGAC 11535 |||| |||||| ||| ||||| Sbjct 263 CTGAAGTAATGGCCCGATCGAC 242 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 259476503133376