Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_006641.1 Length=15959 Score E Sequences producing significant alignments: (Bits) Value seq210783 87.8 2e-13 seq44762 84.2 2e-12 >seq210783 Length=1118 Score = 87.8 bits (96), Expect = 2e-13 Identities = 155/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 681 TGAGCACTCAAAGAAAACGTGCTCTGCATCTTCATTGACTCCTGGGCAGGATGGGCACTC 740 || ||| |||||||| || ||||| || | ||| | || ||| ||||| || Sbjct 905 TGGGCATTCAAAGAATACATGCTCAGCGTTTTCGCGGTTACCACTACAGCTGGGGCATTC 846 Query 741 TGGGGAATTATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCTGATAA 800 ||| |||| || || || ||||||| | || | | | | || ||||| || || | Sbjct 845 TGGAGAATCCTCGTGTTTAAAGCGGTGCAAGTAATCTCAGCAGCAACCGTGACCAGAAAG 786 Query 801 CATCTGTGTAAGATAATAGTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTGATCCT 860 |||||| || ||||| ||||| |||||| || | ||||| || | | |||| | Sbjct 785 CATCTGGGTGAGATAGTAGTTTGTCTCACCATGCGTGCGGTTGTGCTATGGTTCGATCTT 726 Query 861 TGGTATGAGACGATGCGTCCATCTACCATTCACTGTGGCATCCCAC 906 |||||||||||||| |||||||| || || || || |||| || Sbjct 725 TGGTATGAGACGATAGGTCCATCTTCCTTTGCTTGAGGTATCCAAC 680 >seq44762 Length=1607 Score = 84.2 bits (92), Expect = 2e-12 Identities = 163/239 (68%), Gaps = 4/239 (2%) Strand=Plus/Minus Query 681 TGAGCACTCAAAGAAAACGTGCTCTGCATCTTCAT--TGACTCCTGGGCAGGATGGGCAC 738 || ||| |||||||| || ||||| || | ||| | || ||| ||| ||| | Sbjct 1598 TGGGCATTCAAAGAATACATGCTCAGCGTTTTCGCGCTTACCACTG--CAGCTGGGGTAT 1541 Query 739 TCTGGGGAATTATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCTGAT 798 ||||| |||| || || || |||||| | || | ||| | || ||| || || Sbjct 1540 TCTGGAGAATCCTCGTGTTTAATGCGGTGCAAGTAATCTCGGTAGCAAACGTAACCAGAA 1481 Query 799 AACATCTGTGTAAGATAATAGTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTGATC 858 | |||||| || ||||| ||||| |||| | || | ||||| |||| | |||| Sbjct 1480 AGCATCTGGGTGAGATAGTAGTTTGTCTCATCATGCGTACGGTTGTGCCATGGTTCGATC 1421 Query 859 CTTGGTATGAGACGATGCGTCCATCTACCATTCACTGTGGCATCCCACTGTAGTTGCCA 917 ||||||||||||||| |||||||| || || || ||| |||||| || ||||| Sbjct 1420 TTTGGTATGAGACGATAGGTCCATCTTCCCTTGCTTGAGGCGTCCCACATCAGCTGCCA 1362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50577976267936