Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq187312 98.7 1e-15 seq36366 98.7 1e-15 >seq187312 Length=1851 Score = 98.7 bits (108), Expect = 1e-15 Identities = 218/323 (67%), Gaps = 8/323 (2%) Strand=Plus/Plus Query 131860 TCCTATGACTCCTGTTAAACCTATGTTGGCTGATGTATGCGAATCTCTAGAAAAAGCAAT 131919 || ||||||||| || ||||||||| ||||| | ||| | || | |||| || || Sbjct 1035 TCTTATGACTCCAGTATTACCTATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTAT 1094 Query 131920 AGATAAATATAAAGATGGAATGTATTCAGAGGTAAAATATGATGGGGAGCGTGTACAAAT 131979 | |||| | | |||| |||| ||| ||| | ||||||||||| || || || ||| | Sbjct 1095 GAAAAAATGTCCAAATGGTATGTTTTCTGAGATTAAATATGATGGAGAACGGGTTCAAGT 1154 Query 131980 TCATAAAAAAGATAATGTATACAATTATTTTAGTAGAAATTTAAAACCTGTTCTTACTCA 132039 |||||||| | |||| | ||| |||||| | | |||||||| || | |||| Sbjct 1155 GCATAAAAAGGGAAATGAGTTCAAATATTTTTCTCGTGCCTTAAAACCAGTAATGGCTCA 1214 Query 132040 TAAAATTGATGGATTTGATAAACTGTTGA-CTGATGCATTTCCCACAGCAAAAAACTTCA 132098 ||| || | |||| | | | | || | | | |||||||| | || | | | || | Sbjct 1215 CAAAGTT-AGTCATTTTAAAGATTATTTACCAAAAGCATTTCCTAAAGGAGATGATTTGA 1273 Query 132099 TTTTAGATGCGGAATTAATAATGATAGATACAAAATC---AAATTCATTTTTACCATTTG 132155 |||| ||||| ||| || | ||| | ||| || | ||| || || || || | Sbjct 1274 TTTTGGATGCTGAAGTACTTATGGTTGATGTGAATACTGGAAAACCA---TTGCCTTTCG 1330 Query 132156 GTTCATTAGGTATACATAAAAAA 132178 || |||||||||| || ||| || Sbjct 1331 GTACATTAGGTATTCACAAACAA 1353 >seq36366 Length=4232 Score = 98.7 bits (108), Expect = 1e-15 Identities = 143/193 (74%), Gaps = 7/193 (4%) Strand=Plus/Plus Query 21500 TCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTT 21559 ||||||||| || | |||||| || || || |||||||| | || | ||||| Sbjct 2358 TCATCCCTAGAAATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCACGTTTTTTC 2417 Query 21560 AACCAAAATATTGACGCAAATGCT-CCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGC 21618 |||||||||||||| ||||| ||| ||||| || || || || ||||| || ||||| || Sbjct 2418 AACCAAAATATTGAAGCAAA-GCTGCCTGAGAAAAATATTCCTTCAACTGCCGCAAAAGC 2476 Query 21619 AACTAAT-CGTTCACCGTATGTAG-ATTCTTTATCCAATATCCATTTTTCTGCCCATTTT 21676 || |||| ||||| || |||||| | |||| | | ||||| | | |||||| | | Sbjct 2477 AA-TAATACGTTCTCCAAATGTAGCAGTCTTGCTGC-CGATCCACTGTAATGCCCAGTCT 2534 Query 21677 GCCTT-TTCTTTA 21688 ||||| ||||||| Sbjct 2535 GCCTTCTTCTTTA 2547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 527697613498240