Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq227148 176 1e-38 >seq227148 Length=2115 Score = 176 bits (194), Expect = 1e-38 Identities = 1000/1581 (63%), Gaps = 32/1581 (2%) Strand=Plus/Plus Query 363592 CCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTT 363651 |||||| | || |||||||| ||| || ||||| |||||| ||| || ||||| ||| Sbjct 206 CCACAGCTTTCCTCTTGCTTCCTTATAGCTATGAAAGACGATAGCATTGAAGGTATTTTT 265 Query 363652 GACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATC 363711 || || | || | ||||| | ||||| || ||| || || || ||| || || Sbjct 266 GATACTTTAAAACAGTGTGCATTAATTTCTAAATCTGCTGGTGGCATAGGTTTAC--ATA 323 Query 363712 CACAATGT-TC-GTGCACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGC 363769 |||| || || | || ||| |||||| ||||| || ||||||||| | Sbjct 324 CACATTGCATCAGAGCTCAGGGTTCTTACATAGCTGGCACTAATGGCGTCTCGAATGGTC 383 Query 363770 TGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAA 363829 | || || ||| | | |||| | |||||||||| || || || || || |||||| | Sbjct 384 TAGTGCCAATGTTGAGAGTGTATAACAATACTGCCAGATATGTAGATCAAGGTGGAAACA 443 Query 363830 AGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTC 363889 | ||| || || ||||| || ||| | |||||| ||||| || || |||||||| Sbjct 444 AACGCCCTGGTGCATTTGCAATTTATTTAGAGCCTTGGCATGCGGACATATTTGAGTTCT 503 Query 363890 TTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCAC 363949 | || | ||| || || || || || ||| || | || | || ||||| ||||| Sbjct 504 TAGATTTAAAGAAGAATACAGGTAAGGAAGAAATGAGAGCTAGAGAACTGTTTTATGCTT 563 Query 363950 TTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTT 364009 | ||| || |||| | |||||||| | || || | | | |||| ||| | | Sbjct 564 TATGGATTCCTGATCTGTTTATGAAAAGAGTAGAAAATGATGACGTTTGGAGTCTCATGT 623 Query 364010 GCCCACACGAATGTCCAGGTCTTTCCGA-TGTATGGGGTGACGACTATGTTG--CTCTAT 364066 | || || || ||||| || || | || ||| | || || || | | | || ||| Sbjct 624 GTCCTCATGATTGTCCCGGCCTCGCTGACTGT-TATGGAGAGGAATTCGAAGAACTATAT 682 Query 364067 ACGAAAAGTATGAATCGGAGGGAAAGGCTCG-TAAGACAATTCCC-GCACAGAAGCTATG 364124 || ||| |||||| | || | | | | ||| |||| ||| || || || |||| Sbjct 683 ACCAAA--TATGAA--GAAGAAACACGATTTATAAAACAAGTCCGAGCTCAAGAGTTATG 738 Query 364125 GTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTC 364184 | | || || || | || | ||||| || ||||| || ||||| || || ||| | Sbjct 739 GAAGTCAATTATAGAAGCCCAAGTAGAGACTGGTACACCATACATGTTATATAAGGATGC 798 Query 364185 GTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTAC 364244 || ||| | ||| || || | | ||||| |||||| | ||||| || || || Sbjct 799 TTGTAACAGGAAGAGTAATCAAAAAAATCTTGGCACAATTAAATGTAGCAATCTTTGCAC 858 Query 364245 CGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGC 364304 ||| || | ||||||| | || || || || ||||||||||| || || || Sbjct 859 TGAGGTTGTGCAATACACTTCAGAAGAAGAAGTGGCAGTTTGTAACCTTGCTTCCATAGC 918 Query 364305 GCTTCCGGCGTTTGTAAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA 364364 ||| |||||| || || | ||| | | | | | || | || | Sbjct 919 ACTTAACATGTTTGTTGAAAATAAGAGATTTAATTTTAAAAAGTTAAAAGAAATCACAAA 978 Query 364365 TCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC 364424 || ||| ||| | |||| || || || || | |||||| | |||||||| Sbjct 979 GATTGTAACTCAAAATTTAAACAAAGTCATTGATGTTAACTTTTATCCTGTCCCTGAAGC 1038 Query 364425 CGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGT 364484 | ||| |||||| | || | || |||||| ||||||| |||||| | || || | Sbjct 1039 AAAAACTTCAAATATGAGACACAGACCTATTGGTATTGGTGTTCAGGGCATGGCAGATGC 1098 Query 364485 TTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGAT 364544 ||| || || | | || | | || | || ||| ||| | | || Sbjct 1099 GTTTGTGTTGATGAGAATACCTTACGAAAGTGAAAAAGCAATACATCTCAATCAACAAAT 1158 Query 364545 CTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCA-AAAACCAAGG 364603 ||||||||||| |||| || ||| | ||| ||||| || ||| |||| |||| Sbjct 1159 ATTTGAAACAATTTATTATGGTGCATTAGAAGCTAGTTGTGAATTAGCAGAAAAAGAAGG 1218 Query 364604 GAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTAT 364663 | | ||| || ||| | ||| || || || | | |||| |||| | | Sbjct 1219 CACA-TACAGCACATATCAAGGGAGTCCAGCAAGCCAAGGTATCCTACAGTATGATATGT 1277 Query 364664 GGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAG- 364722 || | || || | | || ||| |||||| | | || ||| | || ||| Sbjct 1278 GGGACAAAACTCCTACAGACCTTTGGGACTGGGCTGCCCTCAAAGACAA-GATAGGAAAA 1336 Query 364723 CATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATC 364782 || ||| ||||| || || | | ||| || ||||| || || ||||||||||| || Sbjct 1337 CACGGTTTGCGCAATTCTCTGTTGATAGCCCCTATGCCGACTGCCTCTACTGCACAAATT 1396 Query 364783 CTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTT 364842 || || |||| || | || ||||| |||||| ||| |||| | | | || | Sbjct 1397 CTTGGTAACACTGAATCTTTTGAACCCTTTACATCAAATATTTACCAAAGAAGAGTCTTA 1456 Query 364843 TCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTG 364902 || ||||||||||| ||||| || | |||| ||| ||| | ||| ||||||| Sbjct 1457 TCTGGAGAATTTCCTGTAGTGAACCATCACCTTCTCACTGATTT----GACT-CGGGCTG 1511 Query 364903 -----TGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACA 364957 |||| ||| ||||| || ||| || | ||||| ||| | || | | Sbjct 1512 ATTTATGGGATGAAGATATGAAAAATCTTATAATTTACAACAATGGATCTATACAAGATA 1571 Query 364958 TTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGC 365017 || || | |||| |||| | | | | ||||||||||||||||| ||||| || Sbjct 1572 TTGCAAAAATTCCTAAAGAAATAAGAGATTTGTACAAAACCGTATGGGAGATTTCACTGA 1631 Query 365018 GAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTA 365077 ||| ||| | |||||||| ||| | || || ||||| || ||||| || |||| Sbjct 1632 AAACATCCATACAGATGGCGGCTGATAGAGGAGCGTTTATAGACCAAAGCCAATCTTTTA 1691 Query 365078 ACGTATTCATG--ACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTG 365135 || || |||| || | || | || | || || || || || |||||| ||| || Sbjct 1692 AC--ATACATGTTGCTAAACCTAACTATGGGAAACTAACGTCTATTCATTTCCACGCTTG 1749 Query 365136 GAAATCCGGTCTTAAGACAGG 365156 |||| ||| | || ||||| Sbjct 1750 GAAAATGGGTTTAAAAACAGG 1770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1292796755161632