Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27]
632,176 sequences; 365,010,054 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq19446 187 2e-42
seq227148 156 4e-33
seq78338 107 2e-18
seq422991 104 2e-17
seq78339 98.7 9e-16
seq26980 89.7 5e-13
>seq19446
Length=4212
Score = 187 bits (206), Expect = 2e-42
Identities = 339/493 (69%), Gaps = 10/493 (2%)
Strand=Plus/Plus
Query 23643 GCCTACTTTGTCGAGTGGGGCGTATATCCCAGACAATTTCCCGTAGACAAAGTGCCCGTG 23702
|||||||| || || |||||||| ||||| || |||| ||||| || | || |
Sbjct 1655 GCCTACTTCGTAGAATGGGGCGTCTATCCTAGGAAATTCCCCGTGGATCGCATACCTATA 1714
Query 23703 CCTAATTTGTCACATTTGCTCTACGGCTTCGTACCTATATGCGGCGGCGAGGGAATTAAC 23762
|||||| | | ||||||||||||||||| | || || |||||||| || || || ||
Sbjct 1715 CCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAAT 1774
Query 23763 GACGCTCTCAAAACCG-TGCCGGGCAGTTTCGAGGCGCTGCAGCGTTCGTGCGCGGGCCG 23821
||| || |||| | | |||||||| | || |||||||| || ||| |||||
Sbjct 1775 GACAG-CTTAAAAGAGATTGAAGGCAGTTTTCAAGCACTGCAGCGGTCCTGCAGCGGCCG 1833
Query 23822 CGCCGACTTCAAGGTATCCATCCACGATCCGTGGGCAGCTCTTCAGAAGCCGCAGAAGGG 23881
| |||||||| || || ||||||||||| |||||||| | || || || || || ||
Sbjct 1834 TGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGG 1893
Query 23882 AGTGTCGGCGTGGAACGAGCCGTATCGTGGAAACTTTGGTCAGTTGATGGCAACGAAACT 23941
| |||| | ||||||||||| || || |||||||| || || ||| || ||||
Sbjct 1894 ATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCATTAAAACA 1953
Query 23942 GGCGTATCCGCACTTGAAAGTGCTACCTTCGATCGGTGGCTGGACGCTGTCTGATCCGTT 24001
|| || | || || | || || || || ||||| |||||||| ||||||| ||
Sbjct 1954 AGCTCGCCCTGAATTAAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCTGATCCTTT 2013
Query 24002 ----TTATCACATGCACGAGCCCAGCGTACGCCGTGTGTTTATCGACTCTGTCGAAGAGT 24057
|| | || | | || | || | ||| | | || || | ||||
Sbjct 2014 CTTCTTTTTTGTTGACAAATCTAAGAGAACAC----GATTTGTGCAGTCAGTAAAGGAGT 2069
Query 24058 TTTTGTTAACGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTCCCCGGCGGCA 24117
| | |||| ||||||||||| || || || || || |||||||||||||| || ||||
Sbjct 2070 TCCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGCA 2129
Query 24118 AAGGGGCAAATCC 24130
|||| || || ||
Sbjct 2130 AAGGTGCTAACCC 2142
>seq227148
Length=2115
Score = 156 bits (172), Expect = 4e-33
Identities = 444/683 (65%), Gaps = 6/683 (1%)
Strand=Plus/Minus
Query 145103 TTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTG 145162
|| || || |||||||||||||| || | || || || ||||| || || | || ||
Sbjct 1434 TTTGATGTAAAGGGTTCAAAAGATTCAGTGTTACCAAGAATTTGTGCAGTAGAGGCAGTC 1375
Query 145163 GGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGC 145222
||||| || | ||| | |||||||||| ||||| || || | || || ||
Sbjct 1374 GGCATAGGGGCTATCAACAGAGAATTGCGCAAACCGTGTTTTCCTATCTTGTCTTTGAGG 1315
Query 145223 GTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCC 145282
| | |||| ||||| || || || | ||||||||| || ||||| | || ||
Sbjct 1314 GCAGCCCAGTCCCAAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGTAGGATACCT 1255
Query 145283 TCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAA 145342
| ||| || || || |||||| | | ||||| |||| ||| || | || |||
Sbjct 1254 TGGCTTGCTGGACTCCCTTGATATGTGCTGTATGTGCCTTCTTTTTCTGCTAATTCACAA 1195
Query 145343 CTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCT 145402
|| || || | || || |||||||||| || ||||| ||||| | || |||
Sbjct 1194 CTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTGAGATGTATTGCT 1135
Query 145403 TCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCC 145462
| || || ||||| || || | || || ||||| ||||| || | ||||| | ||
Sbjct 1134 TTTTCACTTTCGTAAGGTATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCA 1075
Query 145463 ACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTA 145522
| || || || | ||| |||| || | | || || |||||| |||
Sbjct 1074 ATACCAATAGGTCTGTGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTA 1015
Query 145523 CGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCA 145582
|| || | ||| || || ||| | ||| | |||||| || | ||||||| |
Sbjct 1014 ACATCAATGACTTTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAACTTTTTA 955
Query 145583 AAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTA 145642
|| | ||| | | ||||| | || | || | || || || || | |||
Sbjct 954 AAATTAAATCTCTTATTTTCAACAAACA------TGTTAAGTGCTATGGAAGCAAGGTTA 901
Query 145643 CAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACAT 145702
||||||||| || || | ||||||| || | ||| | ||| | ||||||||||
Sbjct 900 CAAACTGCCACTTCTTCTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACAT 841
Query 145703 TTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATG 145762
|| || || || ||||||| |||||||| |||||||| || || ||||| || | ||||
Sbjct 840 TTAATTGTGCCAAGATTTTTTTGATTACTCTTCCTGTTACAAGCATCCTTATATAACATG 781
Query 145763 TACGGTCCGCCAGTCTCCACCTG 145785
|| ||| |||||||| || ||
Sbjct 780 TATGGTGTACCAGTCTCTACTTG 758
>seq78338
Length=1389
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || |||| |||||| || ||||| | || || || |||||||| ||||| || |
Sbjct 254 CCTCCTCGCAGACGCAGTACCAAATGAAGTGTGGATTCTTTTTGAATATTGTAGTCAGAC 195
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || | |||||||| ||| | || | ||| || || || || |||
Sbjct 194 AGGGTGCGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCAGGTGGG 135
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||||||||| |||||| || | | || | ||| || | || ||| |
Sbjct 134 ATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTGTCAGAGGGCTCCACT 75
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||||| || || || ||||| ||||| || |||||||||||
Sbjct 74 TCCAGGGTAATAGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 28
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||| || || || || | ||| ||||| || || || ||||| || |
Sbjct 710 CCTCCTCGGAGACGGAGTACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCAGAC 651
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| || || |||||||||||||| |||| | ||| || || || |||||
Sbjct 650 AGAGTGCGGCCATCTTCAAGCTGCTTGCCTGCAAAGATGAGACGTTGTTGATCTGGAGGA 591
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186
|||||||||||||| ||| | | |||| | | | || | |||||| | | ||| |
Sbjct 590 ATTCCTTCTTTGTC-TTGAATCTTAGCTTTAACATTTTCAATAGTATCAGATGGCTCAAC 532
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||||| || || || ||||| || || || |||||
Sbjct 531 TTCCAAGGTTATTGTTTTGCCAGTAAGTGTTTTGACAAATATTTGCAT 484
>seq422991
Length=614
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| ||||| | || ||||| | ||||| || || ||||||||||||||||| || |
Sbjct 17 CCTCCGCGAAGCCGAAGCACAAGATGTAATGTGGATTCCTTTTGAATGTTGTAGTCAGAC 76
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || || |||||||| || || || |||| || || |||||||| || ||
Sbjct 77 AATGTACGTCCATCTTCTAGCTGTTTACCAGCAAAGATCAATCGTTGCTGGTCTGGTGGA 136
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| || || ||| || || | | || | |||||| | || || |
Sbjct 137 ATACCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCTATAGTATCAGAGGCTTCCACC 196
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||||| ||||||||| || || || || |||||||| |||||
Sbjct 197 TCAAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 243
>seq78339
Length=2434
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||||| || || || | || || || |||||||||||||| |||
Sbjct 1507 CCACCACGGAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAA 1448
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||| || | ||||| || || | || ||||| || || || |||||
Sbjct 1447 AGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 1388
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| |||||| || | | || | ||| |||| | || |
Sbjct 1387 ATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACT 1328
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||| ||||||||| || || ||||| ||||||||||||||
Sbjct 1327 TCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 1281
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || | || |||||| || ||||| | ||||| || |||||||| ||||| || |
Sbjct 1963 CCTCCTCTCAGACGCAGTACCAAATGAAGTGTCGATTCTTTTTGAATATTGTAGTCAGAC 1904
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || | |||||||| ||| | || | ||| || || || |||||
Sbjct 1903 AGGGTGCGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGA 1844
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||||||||| |||||| ||| | | || | || || | || || |
Sbjct 1843 ATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACT 1784
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||| ||||| || || || ||||| || || || |||||
Sbjct 1783 TCTAACGTAATAGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 1737
>seq26980
Length=2195
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079
||||||||||| || | ||| || ||||| ||||| || ||||| || || ||
Sbjct 1628 CGCAGCACTAAGTGCAAGGTTGATTCCTTCTGAATATTATAATCTGACAGTGTACGTCCA 1569
Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139
|| || ||||| || ||||| | |||| | ||| ||||| |||||||| |||||||||
Sbjct 1568 TCTTCCAGCTGTTTTCCTGCAAAAATTAGCCTCTGTTGGTCAGGAGGGATACCTTCTTTG 1509
Query 131140 TCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198
|| ||| ||| || ||| | | || | ||||| | | || | || | || |
Sbjct 1508 TC-TTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCTACTTCCAATGTGAT 1450
Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||||| || || | || ||||| ||||| |||||
Sbjct 1449 GGTTTTGCCAGTCAATGTCTTTACAAAAATTTGCAT 1414
Score = 84.2 bits (92), Expect = 2e-11
Identities = 158/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | | |||||||||||| || | || || ||||| || || || || ||
Sbjct 1184 CCACCCCTGAGACGCAGCACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCCGAT 1125
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || ||| || || || ||||| || ||| | |||| | ||| || || |||||
Sbjct 1124 AGTGTCCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATTAGTCTCTGTTGATCTGGAGGA 1065
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||| ||||| ||| | | || ||| | | ||| | ||||| | | || |
Sbjct 1064 ATGCCTTCCTTGTC-TTGAATCTTTGCCTTCACGTTCTCGATTGTATCAGAAGCTTCTAC 1006
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236
|| | || | |||||| || |||| |||||||||||||| |||||||
Sbjct 1005 TTCCAATGTGATGGTTTTCCCAGTTAAGGTTTTTACGAAAATTTGCATGA 956
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468282860451840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |