Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq19446 187 2e-42 seq227148 156 4e-33 seq78338 107 2e-18 seq422991 104 2e-17 seq78339 98.7 9e-16 seq26980 89.7 5e-13 >seq19446 Length=4212 Score = 187 bits (206), Expect = 2e-42 Identities = 339/493 (69%), Gaps = 10/493 (2%) Strand=Plus/Plus Query 23643 GCCTACTTTGTCGAGTGGGGCGTATATCCCAGACAATTTCCCGTAGACAAAGTGCCCGTG 23702 |||||||| || || |||||||| ||||| || |||| ||||| || | || | Sbjct 1655 GCCTACTTCGTAGAATGGGGCGTCTATCCTAGGAAATTCCCCGTGGATCGCATACCTATA 1714 Query 23703 CCTAATTTGTCACATTTGCTCTACGGCTTCGTACCTATATGCGGCGGCGAGGGAATTAAC 23762 |||||| | | ||||||||||||||||| | || || |||||||| || || || || Sbjct 1715 CCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAAT 1774 Query 23763 GACGCTCTCAAAACCG-TGCCGGGCAGTTTCGAGGCGCTGCAGCGTTCGTGCGCGGGCCG 23821 ||| || |||| | | |||||||| | || |||||||| || ||| ||||| Sbjct 1775 GACAG-CTTAAAAGAGATTGAAGGCAGTTTTCAAGCACTGCAGCGGTCCTGCAGCGGCCG 1833 Query 23822 CGCCGACTTCAAGGTATCCATCCACGATCCGTGGGCAGCTCTTCAGAAGCCGCAGAAGGG 23881 | |||||||| || || ||||||||||| |||||||| | || || || || || || Sbjct 1834 TGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGG 1893 Query 23882 AGTGTCGGCGTGGAACGAGCCGTATCGTGGAAACTTTGGTCAGTTGATGGCAACGAAACT 23941 | |||| | ||||||||||| || || |||||||| || || ||| || |||| Sbjct 1894 ATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCATTAAAACA 1953 Query 23942 GGCGTATCCGCACTTGAAAGTGCTACCTTCGATCGGTGGCTGGACGCTGTCTGATCCGTT 24001 || || | || || | || || || || ||||| |||||||| ||||||| || Sbjct 1954 AGCTCGCCCTGAATTAAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCTGATCCTTT 2013 Query 24002 ----TTATCACATGCACGAGCCCAGCGTACGCCGTGTGTTTATCGACTCTGTCGAAGAGT 24057 || | || | | || | || | ||| | | || || | |||| Sbjct 2014 CTTCTTTTTTGTTGACAAATCTAAGAGAACAC----GATTTGTGCAGTCAGTAAAGGAGT 2069 Query 24058 TTTTGTTAACGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTCCCCGGCGGCA 24117 | | |||| ||||||||||| || || || || || |||||||||||||| || |||| Sbjct 2070 TCCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGCA 2129 Query 24118 AAGGGGCAAATCC 24130 |||| || || || Sbjct 2130 AAGGTGCTAACCC 2142 >seq227148 Length=2115 Score = 156 bits (172), Expect = 4e-33 Identities = 444/683 (65%), Gaps = 6/683 (1%) Strand=Plus/Minus Query 145103 TTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTG 145162 || || || |||||||||||||| || | || || || ||||| || || | || || Sbjct 1434 TTTGATGTAAAGGGTTCAAAAGATTCAGTGTTACCAAGAATTTGTGCAGTAGAGGCAGTC 1375 Query 145163 GGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGC 145222 ||||| || | ||| | |||||||||| ||||| || || | || || || Sbjct 1374 GGCATAGGGGCTATCAACAGAGAATTGCGCAAACCGTGTTTTCCTATCTTGTCTTTGAGG 1315 Query 145223 GTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCC 145282 | | |||| ||||| || || || | ||||||||| || ||||| | || || Sbjct 1314 GCAGCCCAGTCCCAAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGTAGGATACCT 1255 Query 145283 TCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAA 145342 | ||| || || || |||||| | | ||||| |||| ||| || | || ||| Sbjct 1254 TGGCTTGCTGGACTCCCTTGATATGTGCTGTATGTGCCTTCTTTTTCTGCTAATTCACAA 1195 Query 145343 CTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCT 145402 || || || | || || |||||||||| || ||||| ||||| | || ||| Sbjct 1194 CTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTGAGATGTATTGCT 1135 Query 145403 TCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCC 145462 | || || ||||| || || | || || ||||| ||||| || | ||||| | || Sbjct 1134 TTTTCACTTTCGTAAGGTATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCA 1075 Query 145463 ACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTA 145522 | || || || | ||| |||| || | | || || |||||| ||| Sbjct 1074 ATACCAATAGGTCTGTGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTA 1015 Query 145523 CGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCA 145582 || || | ||| || || ||| | ||| | |||||| || | ||||||| | Sbjct 1014 ACATCAATGACTTTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAACTTTTTA 955 Query 145583 AAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTA 145642 || | ||| | | ||||| | || | || | || || || || | ||| Sbjct 954 AAATTAAATCTCTTATTTTCAACAAACA------TGTTAAGTGCTATGGAAGCAAGGTTA 901 Query 145643 CAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACAT 145702 ||||||||| || || | ||||||| || | ||| | ||| | |||||||||| Sbjct 900 CAAACTGCCACTTCTTCTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACAT 841 Query 145703 TTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATG 145762 || || || || ||||||| |||||||| |||||||| || || ||||| || | |||| Sbjct 840 TTAATTGTGCCAAGATTTTTTTGATTACTCTTCCTGTTACAAGCATCCTTATATAACATG 781 Query 145763 TACGGTCCGCCAGTCTCCACCTG 145785 || ||| |||||||| || || Sbjct 780 TATGGTGTACCAGTCTCTACTTG 758 >seq78338 Length=1389 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| |||||| || ||||| | || || || |||||||| ||||| || | Sbjct 254 CCTCCTCGCAGACGCAGTACCAAATGAAGTGTGGATTCTTTTTGAATATTGTAGTCAGAC 195 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || | |||||||| ||| | || | ||| || || || || ||| Sbjct 194 AGGGTGCGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCAGGTGGG 135 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||||||||| |||||| || | | || | ||| || | || ||| | Sbjct 134 ATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTGTCAGAGGGCTCCACT 75 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| || || || ||||| ||||| || ||||||||||| Sbjct 74 TCCAGGGTAATAGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 28 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || || || | ||| ||||| || || || ||||| || | Sbjct 710 CCTCCTCGGAGACGGAGTACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCAGAC 651 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || |||||||||||||| |||| | ||| || || || ||||| Sbjct 650 AGAGTGCGGCCATCTTCAAGCTGCTTGCCTGCAAAGATGAGACGTTGTTGATCTGGAGGA 591 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||||||||| ||| | | |||| | | | || | |||||| | | ||| | Sbjct 590 ATTCCTTCTTTGTC-TTGAATCTTAGCTTTAACATTTTCAATAGTATCAGATGGCTCAAC 532 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||||| || || || ||||| || || || ||||| Sbjct 531 TTCCAAGGTTATTGTTTTGCCAGTAAGTGTTTTGACAAATATTTGCAT 484 >seq422991 Length=614 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||| | || ||||| | ||||| || || ||||||||||||||||| || | Sbjct 17 CCTCCGCGAAGCCGAAGCACAAGATGTAATGTGGATTCCTTTTGAATGTTGTAGTCAGAC 76 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || |||||||| || || || |||| || || |||||||| || || Sbjct 77 AATGTACGTCCATCTTCTAGCTGTTTACCAGCAAAGATCAATCGTTGCTGGTCTGGTGGA 136 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || ||| || || | | || | |||||| | || || | Sbjct 137 ATACCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCTATAGTATCAGAGGCTTCCACC 196 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||||||||| || || || || |||||||| ||||| Sbjct 197 TCAAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 243 >seq78339 Length=2434 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| || || || | || || || |||||||||||||| ||| Sbjct 1507 CCACCACGGAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAA 1448 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||| || | ||||| || || | || ||||| || || || ||||| Sbjct 1447 AGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 1388 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| |||||| || | | || | ||| |||| | || | Sbjct 1387 ATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACT 1328 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||||||||| || || ||||| |||||||||||||| Sbjct 1327 TCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 1281 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | || |||||| || ||||| | ||||| || |||||||| ||||| || | Sbjct 1963 CCTCCTCTCAGACGCAGTACCAAATGAAGTGTCGATTCTTTTTGAATATTGTAGTCAGAC 1904 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || | |||||||| ||| | || | ||| || || || ||||| Sbjct 1903 AGGGTGCGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGA 1844 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||||||||| |||||| ||| | | || | || || | || || | Sbjct 1843 ATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACT 1784 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||||| || || || ||||| || || || ||||| Sbjct 1783 TCTAACGTAATAGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 1737 >seq26980 Length=2195 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 ||||||||||| || | ||| || ||||| ||||| || ||||| || || || Sbjct 1628 CGCAGCACTAAGTGCAAGGTTGATTCCTTCTGAATATTATAATCTGACAGTGTACGTCCA 1569 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 || || ||||| || ||||| | |||| | ||| ||||| |||||||| ||||||||| Sbjct 1568 TCTTCCAGCTGTTTTCCTGCAAAAATTAGCCTCTGTTGGTCAGGAGGGATACCTTCTTTG 1509 Query 131140 TCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198 || ||| ||| || ||| | | || | ||||| | | || | || | || | Sbjct 1508 TC-TTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCTACTTCCAATGTGAT 1450 Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||||| || || | || ||||| ||||| ||||| Sbjct 1449 GGTTTTGCCAGTCAATGTCTTTACAAAAATTTGCAT 1414 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | | |||||||||||| || | || || ||||| || || || || || Sbjct 1184 CCACCCCTGAGACGCAGCACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCCGAT 1125 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || ||| || || || ||||| || ||| | |||| | ||| || || ||||| Sbjct 1124 AGTGTCCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATTAGTCTCTGTTGATCTGGAGGA 1065 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| | | || ||| | | ||| | ||||| | | || | Sbjct 1064 ATGCCTTCCTTGTC-TTGAATCTTTGCCTTCACGTTCTCGATTGTATCAGAAGCTTCTAC 1006 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || | || | |||||| || |||| |||||||||||||| ||||||| Sbjct 1005 TTCCAATGTGATGGTTTTCCCAGTTAAGGTTTTTACGAAAATTTGCATGA 956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468282860451840