Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27]
632,176 sequences; 365,010,054 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq227148 536 2e-147
seq36366 123 3e-23
seq242670 105 8e-18
seq352311 100 4e-16
seq187312 86.0 8e-12
>seq227148
Length=2115
Score = 536 bits (594), Expect = 2e-147
Identities = 1103/1622 (68%), Gaps = 45/1622 (3%)
Strand=Plus/Minus
Query 61832 ATTTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAG 61891
|||||| | || || | || || ||||| | | | ||| ||||| || |||| |||
Sbjct 1836 ATTTTACCTTTATCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTCCGTAAGTAG 1777
Query 61892 TACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAA 61951
|||||||| ||||||| ||| | |||| ||| ||||| ||| ||||||||| |
Sbjct 1776 TACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATAGACGTTAGTTTCCCA 1717
Query 61952 TAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTG 62011
|| | || | || | ||| || || | |||||| ||||| || || || ||||| ||
Sbjct 1716 TAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGGCTTTGGTCTATAAACGCTCCTCTA 1657
Query 62012 TCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCG 62070
|| || ||||| | ||| || || ||| ||| ||||| | ||||| || || ||
Sbjct 1656 TCAGCCGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCT 1597
Query 62071 CTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCT 62127
|||| | |||| |||| |||| ||| || || |||||| | || ||
Sbjct 1596 CTTATT-TCTTTAGGAATTTTTGCAATATCTTGTATAGATCCATTGTTGTAAATTATAAG 1538
Query 62128 ATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATT 62187
||| || || || |||| |||||| | | || ||| | | || || || | ||
Sbjct 1537 ATTTTTCATATCTTCATCCCATAAATCAGCCCGAGTCAAATCAGTGAGAAGGTGATGGTT 1478
Query 62188 AACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTC 62247
||||| ||||||||||||| || ||||| | ||||||||| ||| | |||||
Sbjct 1477 CACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTC 1418
Query 62248 CACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAA 62307
| ||| ||| | || || | |||||| ||||| || |||||||||||||| || | |||
Sbjct 1417 AAAAGATTCAGTGTTACCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGGGCTATCAA 1358
Query 62308 TAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAG 62367
| | ||| | | ||||| | ||| || || ||||| || | |||| | ||||||
Sbjct 1357 CAGAGAATTGCGCAAACCGTGTTTTCCTATCTTGTCTTTGAGGGCAGCCCAGTCCCAAAG 1298
Query 62368 ATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATC 62426
|| | || ||||| ||||| | || || | || |
Sbjct 1297 GTCTGTAGGAGTTTTGTCCCACATATCATACTGTAGGATACCTTGGCTTGCTGGACTC-C 1239
Query 62427 CTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCAC 62486
|| |||||| ||||| ||||| || || |||| ||||||||| || ||||||||||
Sbjct 1238 CTTGATATGTGCTGTATGTGCCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCAC 1179
Query 62487 CGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCT--TGCGCTTCCAGGCTATCAAA 62544
| |||||||| ||||| || || | | ||| |||| | ||| || || || || |
Sbjct 1178 CATAATAAATTGTTTCAAATATTTGTTGATTGAGATGTATTGCTTTTTCA--CTTTCGTA 1121
Query 62545 TGGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTC 62603
|| || | | | | | |||||| ||||| | || |||||||||||||| |||||||
Sbjct 1120 AGG-TATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTC 1062
Query 62604 TATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTT 62663
| |||||| |||| || ||| ||||| || | ||||||| | |||| ||| || | ||
Sbjct 1061 TGTGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTT 1002
Query 62664 TATTGAGATTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC 62720
| || | |||| | ||||| ||||| | || || | || ||||| |||||
Sbjct 1001 TGTTTAAATTTTGAGTTACAAT--CTTTGTG-ATTTCTTTTAACTTTTTAAAATTAAATC 945
Query 62721 GCCCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCAT 62780
| || | ||||||||||| | ||| | || || || |||||||| || || || |
Sbjct 944 TCTTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTACAAACTGCCACTTCTT 885
Query 62781 TAGCATCCGCA---TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 62837
| || | | ||||| | | ||||||||||||||| ||||| || || || || |
Sbjct 884 ---CTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATTGTGCCAA 828
Query 62838 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAG 62897
||||| |||||||||||| ||||||| ||||||||||| | ||| |||| |||||||
Sbjct 827 GATTTTTTTGATTACTCTTCCTGTTACAAGCATCCTTATATAACATGTATGGTGTACCAG 768
Query 62898 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGC-----CTT-TATTATAG 62951
| || | || | ||||||||| | ||||| | || |||| ||| | |||||
Sbjct 767 TCTCTACTTGGGCTTCTATAATTGACTTCCATAACTCTTGAGCTCGGACTTGTTTTATAA 708
Query 62952 ATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAA 63011
|| || | |||| | || ||| ||||| | | |||||| || ||||| ||
Sbjct 707 ATC-GTGTTTCTTCT-----TCATATTTGGTATATAGTTCTTCGAATTCCTCTCCATAAC 654
Query 63012 CATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCA 63071
| | || || ||||| |||| |||||||| | ||| | | |||| | |
Sbjct 653 AGTCAGCGAGGCCGGGACAATCATGAGGACACATGAGACTCCAAACGTCATCATTTTCTA 594
Query 63072 CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTT 63131
||| ||||||||| |||||||||||||| | ||| ||| || ||||| | ||| ||
Sbjct 593 CTCTTTTCATAAACAGATCAGGAATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTT 534
Query 63132 CCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTT 63191
| || || ||||||||||| || | ||| | |||| | | || || | |||||| || |
Sbjct 533 CTTCCTTACCTGTATTCTTCTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCT 474
Query 63192 CCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGG 63251
| || || || || | | ||||| ||||||||||| || ||||||| ||||| || |
Sbjct 473 CTAAATAAATTGCAAATGCACCAGGGCGTTTGTTTCCACCTTGATCTACATATCTGGCAG 414
Query 63252 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGA 63311
| || ||||| |||||||||||||| | | |||||| || ||||| || || | |
Sbjct 413 TATTGTTATACACTCTCAACATTGGCACTAGACCATTCGAGACGCCATTAGTGCCAGCTA 354
Query 63312 TATAGCTTCCACTG-GCACGAAT---ATTACTAATTGATAGACCTATTCCCCCTGCCATT 63367
| || || ||| || | || || || || || |||||| || || || |
Sbjct 353 TGTAAGAACC-CTGAGCTCTGATGCAATGTGTA--TG-TAAACCTATGCCACCAGCAGAT 298
Query 63368 TTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATC 63427
||||| |||||||| || ||||||| |||||| | || || || || ||||| || ||
Sbjct 297 TTAGAAATTAATGCACACTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTC 238
Query 63428 AT 63429
||
Sbjct 237 AT 236
>seq36366
Length=4232
Score = 123 bits (136), Expect = 3e-23
Identities = 161/222 (73%), Gaps = 7/222 (3%)
Strand=Plus/Plus
Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742
|||| || ||| ||| | ||| ||| || || | ||||||||| || ||||| ||||
Sbjct 2356 CCTCATCCCTAGAAATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCACGTTTTT 2415
Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802
| | ||||||||| || ||||| || || || || |||||||| ||||||||||| |
Sbjct 2416 TCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCTTCAACTGCCGCAAAAG 2475
Query 32803 CAATAAGTCTCTCTCCATAACCGGCGCTGTCATG-----TATCCACTTTTGAGCCCAATC 32857
|||||| | ||||| || | || ||| || ||||||| | ||||| ||
Sbjct 2476 CAATAATACGTTCTCC--AAATGTAGCAGTCTTGCTGCCGATCCACTGTAATGCCCAGTC 2533
Query 32858 GGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAA 32899
|||||||| |||||||| || | ||||| || ||||||||
Sbjct 2534 TGCCTTCTTCTTTACACACGGTAGAGTCTCAATTGCATTAAA 2575
Score = 89.7 bits (98), Expect = 6e-13
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 33147 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 33206
|| |||| || ||||||||| | |||||||| ||||| || || ||||||||||| | |
Sbjct 3607 TTGGATAAGTCTACTTCTTCCGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 3666
Query 33207 CAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATT 33253
|| ||||| ||||||| ||||| || ||||| || | |||||||
Sbjct 3667 CATATGTCTGGATATTGGATTGGGAATATAACGAAACGTCTTGGATT 3713
>seq242670
Length=698
Score = 105 bits (116), Expect = 8e-18
Identities = 90/111 (81%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 63610 CTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 63669
||| |||| ||| |||||||| || ||| |||||||||||||||||||||||||||||||
Sbjct 390 CTTATTGTCTATCTTCAACAAATATGATCTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 449
Query 63670 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 63720
| ||| |||| || |||| ||| | |||| | ||| ||||||| |||
Sbjct 450 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTATTTTT 500
>seq352311
Length=307
Score = 100 bits (110), Expect = 4e-16
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 63821 TTTTTTGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCC 63880
|| || || |||||||||| ||| |||| || ||||| || || | ||||||||||||
Sbjct 278 TTCTTGGTGTCTTTGTGTAAATTGGATATTGCGATTCTGGCAGCCAAAATGGCATAATCG 219
Query 63881 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 63940
||||| | ||| || ||| ||||| ||||| || || ||| | || | || |||||
Sbjct 218 GGATGATCTGTTGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCCGTT 159
Query 63941 GTTACACCATTATATATTCC 63960
||||||||| |||||| ||
Sbjct 158 GTTACACCAGAATATATGCC 139
>seq187312
Length=1851
Score = 86.0 bits (94), Expect = 8e-12
Identities = 242/369 (66%), Gaps = 7/369 (2%)
Strand=Plus/Plus
Query 155184 TTATGACTCCA--ATTAATCCCATGTTAGCGGAATCGTGTGATTCTGTCAATAAGGCATT 155241
||||||||||| |||| || |||||||| ||| | || | || || | | ||| |
Sbjct 1037 TTATGACTCCAGTATTA--CCTATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTAT 1094
Query 155242 TAAAAAATTTCCATCAGGAATGTTTGCTGAAGTCAAATACGATGGCGAGAGAGTACAAGT 155301
||||||| |||| || |||||| |||| | ||||| ||||| || | || |||||
Sbjct 1095 GAAAAAATGTCCAAATGGTATGTTTTCTGAGATTAAATATGATGGAGAACGGGTTCAAGT 1154
Query 155302 TCATAAAAATAATAACGAGTTTGCCTTCTTTAGTAGAAACATGAAACCAGTACTCTCTTA 155361
|||||||| || ||||| | ||| | | | | ||||||||| | || |
Sbjct 1155 GCATAAAAAGGGAAATGAGTTCAAATATTTTTCTCGTGCCTTAAAACCAGTAATGGCTCA 1214
Query 155362 TAAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTTAAAAAAGCTACGTCTATCGT 155421
||||| | || | ||||| || |||| ||||||||| |||| | | |
Sbjct 1215 CAAAGTTAGTCATTTTAAAGATTATTTACCAAAAGCATTTCCTAAAGGAGATGATTTGAT 1274
Query 155422 ATTGGATTCTGAAATTGTTCTTGTAGACGAACATAATG---TACCGCTCCCGTTTGGAAG 155478
|||||| ||||| | || | || || | ||| || ||| | || || || |
Sbjct 1275 TTTGGATGCTGAAGTACTTATGGTTGATGTGAATACTGGAAAACCATTGCCTTTCGGTAC 1334
Query 155479 TTTAGGTATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTCGTGTTTGA 155538
|||||||| |||||| | ||||| |||| | || | | ||||| | | |||||
Sbjct 1335 ATTAGGTATTCACAAACAATCAGAATTTAAAGATGCTCAAGTTTGTTTATATATATTTGA 1394
Query 155539 CTGTTTGTA 155547
|| |||||
Sbjct 1395 TTGCTTGTA 1403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628624913209600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |