Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq19446 286 4e-72 seq14063 107 2e-18 >seq19446 Length=4212 Score = 286 bits (316), Expect = 4e-72 Identities = 795/1207 (66%), Gaps = 37/1207 (3%) Strand=Plus/Minus Query 51249 CCCAGGCCCTCGTGCATGGCGTTCAGTAGGTCGCCGTTGTCAGCGTCGATTTCCCACGCA 51308 || || ||| || |||||| |||||||| || ||||| ||||||||||||||||| ||| Sbjct 2841 CCGAGACCCATGTTCATGGCATTCAGTAGATCACCGTTATCAGCGTCGATTTCCCAAGCA 2782 Query 51309 AACAATCCCGCCAACCCGTTCGCAAGCACGTACTGGCCCTTGGCGCGAACGGATCGAGCG 51368 || | || | | | ||| || || | ||||| | ||| |||| ||| Sbjct 2781 AAGAGACCGCCTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACCGATCTAGCA 2722 Query 51369 TTGTCGAACGTGATCAGGTTGCCCGC-GATCGGTTCGAAGCCGTACGCAGCCTCGGCGAT 51427 ||||| | || | || | || | ||| ||| |||| |||| | || | ||||| Sbjct 2721 TTGTCATAAGTTACAAGATCTCCAGTTGAT-GGTCTGAAGACGTAAGGTGCTTGGGCGAC 2663 Query 51428 CAGATCGTAGTAGAACTCGTAGT--CTTTGACGAACT-CGTTCGCGATCTGCCGATAGTC 51484 ||||| | |||||| | | | |||| || | | ||||| |||| || ||||| Sbjct 2662 ATTGTCGTAATGGAACTCCCACTTGCCTTGAGCAATTTCATTCGCAATCTCCCTGTAGTC 2603 Query 51485 GACCACCCCATTTTCCCAGGTGCCTTCGATGGGTCCGCCGGCGACGCCGCTGAACCA--- 51541 ||||| || | || ||| || |||| || ||||| ||| ||| |||| Sbjct 2602 AACCACTCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGGAAT 2543 Query 51542 GTTCGGTTCGTAGTCGTAGCCGGTCACGTTCGACCAGCCGCGAGCGTACATCGCCACGCC 51601 ||| |||||| || | | || || | |||||| ||| | ||||| || || || Sbjct 2542 GTTGTCTTCGTAATCATGGACGC-CA-----GTCCAGCCACGACCATACATAGCAACACC 2489 Query 51602 GACGACGATCTTCT---GATTGCGCACGCCCTGTTCGAGAAGCGACGACACGGCATAGTC 51658 ||| || ||||||| |||| ||| |||||| | | | | || | |||| Sbjct 2488 GACTACAATCTTCTTAGGATT---CACTCCCTGTGCCAACAAGTATTTTACTCCGAAGTC 2432 Query 51659 GGTGGTGTACTTTTCGTCGGGGTTCCATTGGGGCGCGAACAGTGTGGTCTGGTAGCCCAG 51718 | ||||| |||| | ||| |||||| |||||| ||| || || || | || || Sbjct 2431 AGATGTGTAGGTTTCCTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAG 2372 Query 51719 ATCGGTGTTGGACCACGCACCCTTGAAATCGTAGTTCATGAGGAAAATGTAATCCAACTG 51778 | ||| ||||| || |||||||| || || |||| | |||||| | ||||| | Sbjct 2371 AGTATCGTTTGACCAGGCTCCCTTGAAGTCATAACTCATCAAGAAAATATGATCCATATA 2312 Query 51779 CGTCTGCGCCCGAGCGTAGTCGACGACTTGAATTTTATCGTAGCCCGCGCTGATGGCGCT 51838 | || ||| ||||||| |||||||| |||||||| | || ||||| || || Sbjct 2311 ATTTTGAGCCTTGCCGTAGTCAACGACTTGGATTTTATCCCATCCAGCGCTAATAGCAGA 2252 Query 51839 GGTCAACAGGTA---CGAACGGTTCGTGGCGGCGCTCAACTCGTCGAGCATGTCGCGCAG 51895 || || ||| | || ||| | || | | | || |||||||| || || | Sbjct 2251 AGTTAATTCGTATTTCTTACCATTCTTAGCTGAG---AGTTCATCGAGCATCTCACGTAA 2195 Query 51896 CTCGGTCAAAAGCGTCACGTACGTCGCACCATCGCGATC----GGGATCGCCCAGGTCGG 51951 || ||| | || ||| | ||| ||| | ||| ||| | || || || | Sbjct 2194 TTCTTTCATCAA----ACTTACATAGCA--ATCACCATCTTCTGGGCTA-CCGAGATCAG 2142 Query 51952 GATTGGCGCCTTTGCCGCCCGGAAACTCCCAGTCGACGTCGACTCCGTCGAAGAACTTCC 52011 | || || |||||||| || || |||||||| |||| || || || |||||||| |||| Sbjct 2141 GGTTAGCACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCC 2082 Query 52012 AAGTCAGCAGAAACTCGCGAACCGATTCGACGAAGGTTGCGCGTTTGCTCGCGTCGTGCA 52071 | || || || ||||| || || | || || || | || ||| | Sbjct 2081 ATGTTAGAAGGAACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAGATTTGTCAACAA 2022 Query 52072 GGAAGAAGAACGGATCGGACAGCGTCCAACCGCCGATCGAGGGCAGAATCTTGAGCGAAG 52131 |||||||| ||||| | |||||||| || || || ||||| |||||||| | || Sbjct 2021 AAAAGAAGAAAGGATCAGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTTAATTCAG 1962 Query 52132 GATTGGCCCGTTTGGCCGCCATCAGCTGTCCAAAGTTTCCCTTGTACGGATCGTTCCAGG 52191 | || |||| | ||| | || |||||||| || ||||| || |||||||| | Sbjct 1961 GGCGAGCTTGTTTTAATGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATG 1902 Query 52192 CCGAGACGCCTTTCTGCGGTTTCTGCAGCGCCGCCCAGGGATCGTGAATCGTCACCTTAA 52251 || | ||||| || ||||| || | || ||||| |||||||| || | || || | Sbjct 1901 AAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGA 1842 Query 52252 AGTCCGACCTGCCCACGCACGACCGTTGCAACGCTTCGAAACTGTTGTCGATCGGTTTCA 52311 ||||| | ||| ||| ||||| |||| |||| |||||| || ||| ||| | Sbjct 1841 AGTCCTCACGGCCGCTGCAGGACCGCTGCAGTGCTTGAAAACTGCCTTCAATCTCTTTTA 1782 Query 52312 GGCTGTCGTTGATGCCGTCGCCTCCGCACATGGGAATGAAGCCGTACAGCAGATGCGACA 52371 |||||| ||||||||||| || ||||| || ||||| |||||||| |||| ||| | | Sbjct 1781 AGCTGTCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAGTAA 1722 Query 52372 GGTTCGGCAACGGCACCAGATCTACGGGAAAGTTGCGCAAGTAAACGCCCCATTCGACAA 52431 | || || | || | |||| ||||| || || | || ||||||||||| || | Sbjct 1721 GATTAGGTATAGGTATGCGATCCACGGGGAATTTCCTAGGATAGACGCCCCATTCTACGA 1662 Query 52432 AGTAGGC 52438 ||||||| Sbjct 1661 AGTAGGC 1655 >seq14063 Length=7913 Score = 107 bits (118), Expect = 2e-18 Identities = 82/97 (85%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 38523 AAATGTTTCTTTTGCGGCGGCGGCCTTAAGGACTGGGAGCCTGCGGACGATCCGTGGGCG 38582 || || |||| || | ||||||||| |||||||||||| || |||| ||||||| | Sbjct 7038 AAGTGCTTCTACTGTGACGGCGGCCTCAAGGACTGGGAGAATGACGACGTGCCGTGGGAG 7097 Query 38583 CAGCACGCGCGCTGGTTCGACAGGTGCGCTTACGTGC 38619 ||||||||||||||||||||| ||||||||||||||| Sbjct 7098 CAGCACGCGCGCTGGTTCGACCGGTGCGCTTACGTGC 7134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533354951992960