Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq36366 158 1e-33 seq453692 136 4e-27 seq500743 132 5e-26 seq69360 132 5e-26 seq121304 131 2e-25 seq190216 129 6e-25 seq416927 127 2e-24 seq240701 127 2e-24 >seq36366 Length=4232 Score = 158 bits (174), Expect = 1e-33 Identities = 170/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 93355 ATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGC 93414 ||| | ||| ||||| || ||||| | ||| ||||| || ||||| ||||| ||||| || Sbjct 3234 ATCCCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGC 3293 Query 93415 AATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTC 93474 |||||| || || ||||| || || ||||| || | || || ||||| || || | ||| Sbjct 3294 AATTTGAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTC 3353 Query 93475 TACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTAT 93534 ||| | || ||||| || |||||||| || || ||||| || || || | |||||| || Sbjct 3354 TACTAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGCTTGAT 3413 Query 93535 AAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATC 93579 ||||||||| ||| |||||| | | |||||||| | ||| || Sbjct 3414 AAAATGTTTTTCACAATCTTTTAATGTCTCCCAATCTGCTAGGTC 3458 Score = 156 bits (172), Expect = 5e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 ||||||||||| || || || || | ||| || ||||| || | |||||||||||||||| Sbjct 2376 TCATTGCTGAAAGTCAATCCGGGCATCAGACCACGTTTTTTCAACCAAAATATTGAAGCA 2435 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAA 93253 || || || || |||||||| ||||| || || ||||| || | ||||||||| |||| Sbjct 2436 AAGCTGCCTGAGAAAAATATTCCTTCAACTGCCGCAAAAGCAATAATACGTTCTCCAAAT 2495 Query 93254 TTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGT 93313 | || | || |||| |||||| | ||| ||||| || || || ||||| | ||| ||| Sbjct 2496 GTAGCAGTCTTGCTGCCGATCCACTGTAATGCCCAGTCTGCCTTCTTCTTTACACACGGT 2555 Query 93314 AGTGTTTCGATAGCGTTAAATAGGTAATC 93342 || || || || || ||||||| | |||| Sbjct 2556 AGAGTCTCAATTGCATTAAATAAGAAATC 2584 Score = 129 bits (142), Expect = 6e-25 Identities = 107/131 (82%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 93590 TCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCT 93649 || |||||||| ||||||||||||||||||| |||||||| ||||| | |||||||||| Sbjct 3616 TCTACTTCTTCCGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGCCATATGTCT 3675 Query 93650 TGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTCTAGT 93709 ||||||| ||||| ||||| || ||||| | || || || | || | ||||| ||| Sbjct 3676 GGATATTGGATTGGGAATATAACGAAACGTCTTGGATTGTCCCTCAGCAGGGGCTCAAGT 3735 Query 93710 TGTGGGTCAAA 93720 ||||||||||| Sbjct 3736 TGTGGGTCAAA 3746 >seq453692 Length=806 Score = 136 bits (150), Expect = 4e-27 Identities = 94/104 (90%), Gaps = 3/104 (3%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 663 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 604 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA-TTATTATTGGAATTTT 126365 ||||||||||||||||||||||||||| || || || |||||| Sbjct 603 GTGGGTTCGAACCCCACACCTGACAAACTTTTTCTTTTAATTTT 560 >seq500743 Length=452 Score = 132 bits (146), Expect = 5e-26 Identities = 87/94 (93%), Gaps = 3/94 (3%) Strand=Plus/Plus Query 126255 TTCTATTTACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC 126314 ||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 360 TTCTAATTAC-GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCC 418 Query 126315 --TCGGGAGCGTGGGTTCGAACCCCACACCTGAC 126346 |||||||||||||||||||||||||||||| Sbjct 419 GAGAGGGAGCGTGGGTTCGAACCCCACACCTGAC 452 >seq69360 Length=13292 Score = 132 bits (146), Expect = 5e-26 Identities = 82/87 (94%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 10635 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 10694 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 10695 GTGGGTTCGAACCCCACACCTGACAAA 10721 >seq121304 Length=504 Score = 131 bits (144), Expect = 2e-25 Identities = 86/93 (92%), Gaps = 3/93 (3%) Strand=Plus/Minus Query 126257 CTATTTACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-- 126314 |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 471 CTATATAC-GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGA 413 Query 126315 TCGGGAGCGTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||||||||||||||||| Sbjct 412 GAGGGAGCGTGGGTTCGAACCCCACACCTGACA 380 >seq190216 Length=2082 Score = 129 bits (142), Expect = 6e-25 Identities = 82/88 (93%), Gaps = 2/88 (2%) Strand=Plus/Minus Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGA 126320 || |||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct 1013 ACCGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGA 954 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAA 126348 |||||||||||||||||||||||||||| Sbjct 953 GCGTGGGTTCGAACCCCACACCTGACAA 926 >seq416927 Length=2574 Score = 127 bits (140), Expect = 2e-24 Identities = 79/84 (94%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 726 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 785 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||||||||||| Sbjct 786 TGGGTTCGAACCCCACACCTGACA 809 >seq240701 Length=699 Score = 127 bits (140), Expect = 2e-24 Identities = 79/84 (94%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 391 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 332 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||||||||||| Sbjct 331 TGGGTTCGAACCCCACACCTGACA 308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552460374586240