Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq49786 87.8 4e-14 seq105419 78.8 2e-11 >seq49786 Length=3093 Score = 87.8 bits (96), Expect = 4e-14 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 3332 ACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTT 3391 |||| ||| ||||| ||||| | | | || |||||| || |||||||||||||||| Sbjct 1139 ACCCTATGGCTCGAGTATTTCCTAAAGTTACAAAATGTACATTCCACAAATACGGTCCTT 1198 Query 3392 CGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGA 3451 |||| || || | || | ||| || || || | || || ||| | || || |||| Sbjct 1199 CGGGAACCGTGCAGAAGTTCGACGGGCTGTGTGTACTACCATTGAATATTGTAAATGAGA 1258 Query 3452 AGATCTACATTTTCCTCTGGTTCTGGTTCTACGTGCTAGCCATCATCAGCGGTATC 3507 ||||||| | ||||| ||||||||||| | || | || ||||||||||| Sbjct 1259 AGATCTATGTATTCCTGTGGTTCTGGTTTATTATTCTGTCAATTCTCAGCGGTATC 1314 >seq105419 Length=1991 Score = 78.8 bits (86), Expect = 2e-11 Identities = 60/71 (85%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 3410 ACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCT 3469 |||| | ||||||||| || ||| ||||| |||||||||||||| ||| ||||||||| Sbjct 631 ACGACGCACTCTGCATACTGCCGCTCAACGTCGTCAACGAGAAGATATACGTTTTCCTCT 690 Query 3470 GGTTCTGGTTC 3480 |||| |||||| Sbjct 691 GGTTTTGGTTC 701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12393707976000