Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq227148 114 2e-20 >seq227148 Length=2115 Score = 114 bits (126), Expect = 2e-20 Identities = 464/724 (64%), Gaps = 34/724 (5%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 || ||||| | || | || ||||| | ||| ||||||| | ||||| || || ||| Sbjct 1440 TAAATATTTGATGTAAAGGGTTCAAAAGATTCAGTGTTACCAAGAATTTGTGCAGTAGAG 1381 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT-TTTCCCTAATGCGTTC 114060 || || ||||| || || || | || || || | ||| | ||| |||| || | Sbjct 1380 GCAGTCGGCATAGGGGCTATCAACAGAGAATTGCGCAAACCGTGTTTTCCTATCTTGT-C 1322 Query 114061 CTTGAGGGCGTCCCAGTC----------GTAGTTGAGCTTTGTCTCCCCCTGCCACATAT 114110 |||||||| ||||||| |||| ||| |||||| |||||||| Sbjct 1321 TTTGAGGGCAGCCCAGTCCCAAAGGTCTGTAG--GAGTTTTGTC--------CCACATAT 1272 Query 114111 CAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAA 114170 || |||| |||||||||||| ||||| || | | |||| ||||| ||| || Sbjct 1271 CATACTGTAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTGCTGTATGTGCCTTCTT 1212 Query 114171 CCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAG 114230 || || ||||| | || || || | || | | ||| ||||| ||||| || | Sbjct 1211 TTTCTGCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTT 1152 Query 114231 CATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCC 114289 ||| | || ||| | | || || | | | || ||| | ||| |||| Sbjct 1151 GATTGAGATGTATTG-CTTTTTCACTTTCGTAAGGTATTCTCATCAACACAAACGCATCT 1093 Query 114290 GCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTC 114349 || | || || ||||| | ||||| || | ||||||||||| || || || Sbjct 1092 GCCATGCCCTGAACACCAATACCAATAGGTCTGTGTCTCATATTTGAAGTTTTTGCTTCA 1033 Query 114350 TCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTG 114409 || |||||||| || ||| || || | |||| ||||| || |||| ||||||| Sbjct 1032 GGGACAGGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTGAGTTACAATCTTTGTG 973 Query 114410 ATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGG 114469 ||||| | | ||||| ||| ||| || | | |||| ||| || | ||| Sbjct 972 ATTTCTTTTAACTTTTTAAAATTAAATCT---CTTATTTTCA---ACAAACATGTTAAGT 919 Query 114470 GCGATTGACGCCAGATTACACACAG--AGGTCTCATCCTTATCAGTGTACTCTATAATTT 114527 || || || || || ||||| || | | ||| | || | |||||| | | || | Sbjct 918 GCTATGGAAGCAAGGTTACAAACTGCCACTTCTTCTTCTGA--AGTGTATTGCACAACCT 861 Query 114528 CCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTAC 114587 | || || | ||| || ||||| ||||| | || |||||||| ||| |||||| Sbjct 860 CAGTGCAAAGATTGCTACATTTAATTGTGCCAAGATTTTTTTGATTACTCTTCCTGTTAC 801 Query 114588 ACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCT 114647 | |||||||| || | ||||||||| || || ||||| ||||| | | ||| | || Sbjct 800 AAGCATCCTTATATAACATGTATGGTGTACCAGTCTCTACTTGGGCTTCTATAATTGACT 741 Query 114648 TCCA 114651 |||| Sbjct 740 TCCA 737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592633192382080