Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq601744 102 6e-17 seq279659 86.0 5e-12 >seq601744 Length=311 Score = 102 bits (112), Expect = 6e-17 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 118179 CCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCATACTG 118238 ||||| || || || || ||| ||||||||||||| || |||| || ||||| | ||| Sbjct 75 CCGTCTCGCCCCGCTCTCCCTGTCTCTTGATAATATCCTTCCACAGACTTGGGTAAGCTG 134 Query 118239 TGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCGT 118294 ||||| ||||| || ||||| || ||||| || |||||||| ||||| ||||| || Sbjct 135 TGATGGATCACAAAACGCACATCTGGTTTGTCTATGCCCATGCCGAATGCTATTGT 190 >seq279659 Length=1464 Score = 86.0 bits (94), Expect = 5e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 108466 TGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAAC 108525 ||||| | || || | || |||||||||| || || || |||| ||||| ||||| Sbjct 812 TGGGTACGTGACCATCGAGTCCACCACAAGTTGTCGGAAACTTCGGCGGACCCGCACAAT 753 Query 108526 GCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGAC 108585 || | ||||||||| |||||||| ||||| ||||||||||||| || ||||| | Sbjct 752 GCTCATCGGGGGTTCTTTTTCTCGCATGTGGGGTGGCTCATGATGAAGAAACACCCCCAT 693 Query 108586 GTGATCTCGGCCGGTCGAAAAATGGACATGACGGACATAT 108625 || ||| | || ||||| || ||||| || |||| Sbjct 692 GTTATCAGCGAAGGCAATAAAATTGATATGACCGATATAT 653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378831376105344