Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq19446 187 2e-42 seq78339 116 4e-21 seq78338 107 2e-18 seq26980 104 2e-17 seq422991 89.7 5e-13 seq26981 84.2 2e-11 seq26979 82.4 8e-11 >seq19446 Length=4212 Score = 187 bits (206), Expect = 2e-42 Identities = 357/522 (68%), Gaps = 3/522 (1%) Strand=Plus/Plus Query 27983 AAACATCCCGAGAAAATTGTGGCCGCCTATTTCGTCGAGTGGGGCGTGTATCTGCGGCAG 28042 ||||||| || ||| |||||| ||||| ||||| || |||||||| |||| || | Sbjct 1632 AAACATCTGGA-AAAGTTGTGGGTGCCTACTTCGTAGAATGGGGCGTCTATCCTAGGAAA 1690 Query 28043 TTTCCCGTCGACAAAGTGCCCGCGCCCAACCTGTCGCACTTGCTGTACGGTTTCGTGCCG 28102 || ||||| || | || || || || | || ||||| ||||| || | || Sbjct 1691 TTCCCCGTGGATCGCATACCTATACCTAATCTTACTCATTTGCTCTACGGCTTTATTCCA 1750 Query 28103 ATATGCGGCGGCGACGGCATAAACGACGCCCTCAAGACCGTTCCCGGCAGTTTCGAGGCG 28162 || |||||||| |||||||| || ||| | | || || |||||||| | || Sbjct 1751 ATTTGCGGCGGTGACGGCATCAATGACAGCTTAAAAGAGATTGAAGGCAGTTTTCAAGCA 1810 Query 28163 CTGCAGCGCTCGTGCGCCGGGCGCGCCGACTTCAAGGTGACGATCCACGATCCCTGGGCC 28222 |||||||| || ||| ||| || | |||||||| || | ||||||||||| ||||| Sbjct 1811 CTGCAGCGGTCCTGCAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCA 1870 Query 28223 GCCATTCAGAAGCCGCAAAAGGGCGTCTCTACGTGGAACGAGCCGTACAAAGGCAACTTT 28282 || | || || || ||||| || | ||| | ||||||||||| ||||||||||||||| Sbjct 1871 GCATTACAAAAACCACAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTT 1930 Query 28283 GGGCAATTGATGAGCGTCAAATTAGCCAATCCGCACTTGAAGGTGCTGGCGTCGATCGGC 28342 || ||||| ||| | ||| ||| || | || ||| | || | || || || Sbjct 1931 GGCCAATTAATGTCATTAAAACAAGCTCGCCCTGAATTAAAGATTCTTCCCTCTATTGGT 1990 Query 28343 GGCTGGACGCTGTCGGACCCATTCTTTCACATGCACGACGCGACCGTGCGCCAAACG-TT 28401 || |||||||| | || || ||||| | ||| | | | | ||| || Sbjct 1991 GGGTGGACGCTTGCTGATCCTTTCTTCTTTTTTGTTGACAAATCTAAGAG-AACACGATT 2049 Query 28402 CATCGATTCCGTCGTGGACTTTCTGCTGACCTGGAAGTTCTTCGACGGCGTCGACATCGA 28461 | | || || ||| || || || || ||||| |||||||| || || || ||||| Sbjct 2050 TGTGCAGTCAGTAAAGGAGTTCCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGA 2109 Query 28462 TTGGGAGTTTCCGGGCGGCAAAGGAGCCAATCCCGATGTCGG 28503 ||||||||| || || |||||||| || || || ||| |||| Sbjct 2110 TTGGGAGTTCCCTGGTGGCAAAGGTGCTAACCCTGATCTCGG 2151 >seq78339 Length=2434 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||||||||||| |||| ||| | | | ||||||||||| ||||||||||| Sbjct 2191 CCACCTCGCAAACGCAGTACTAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCTGAT 2132 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||||| || || | ||| || |||| | |||| ||||| ||||| || || || Sbjct 2131 AAAGTACGCCCATCTTCCAATTGCTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGGA 2072 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || ||||| || ||| | || | |||| | ||| | |||||| | | |||||| Sbjct 2071 ATGCCCTCTTTATC-TTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCAC 2013 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || || || || || || ||||| || ||||| Sbjct 2012 CTCCAGGGTTATAGTCTTGCCTGTTAGGGTCTTAACAAATATTTGCAT 1965 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC-GCT 138446 ||||| || | |||||| |||||||||| | || ||||||||||| || || || | | Sbjct 1735 CCGCCACGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGAT 1676 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||||| || || | ||| || || | | | || || | ||||||||| || || Sbjct 1675 AAT-GTACGGCCATCTTCCAATTGCTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGG 1617 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||||||||| ||| ||| || | | ||| | ||||| | | ||| || Sbjct 1616 AATACCTTCTTTGTCTTGGATCTTTGCCTTCACGTTTTCAATTGTGTCAGAAGGCTCTAC 1557 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | ||| | ||||| ||||| ||||| || ||||| |||||||| Sbjct 1556 TTCTAACGTGATGGTTTTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 1509 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || || || | | || || |||||||||||||||||| Sbjct 1507 CCACCACGGAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAA 1448 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||| || | ||| || || | | | || | ||| ||||| || ||||| Sbjct 1447 AGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 1388 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| |||| | ||||| | ||| | ||||||| | || || Sbjct 1387 ATGCCTTCCTTGTCT-TGAATTTTCGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAAC 1329 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | |||||||| || || ||||| || ||||||||||| Sbjct 1328 TTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 1281 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || ||||| || ||||| | | || || |||||||| |||||||| | Sbjct 1963 CCTCCTCTCAGACGCAGTACCAAATGAAGTGTCGATTCTTTTTGAATATTGTAGTCAGAC 1904 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || | ||| || || | | || ||||| ||||| || ||||| Sbjct 1903 AGGGTGCGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGA 1844 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||||||||| |||||| |||| | ||| | ||||| | | || || Sbjct 1843 ATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACT 1784 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | ||| | ||||| ||||| || ||||| ||||| || ||||| Sbjct 1783 TCTAACGTAATAGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 1737 >seq78338 Length=1389 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||||||||| | | || || ||||| ||||||||||| | Sbjct 1166 CCACCACGAAGACGAAGAACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCCGAC 1107 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||||| | |||||||| | | |||| |||||||||||||| || || Sbjct 1106 AGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAGATAAGACGCTGTTGGTCTGGGGGA 1047 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || || | | ||| | |||||||| | |||||| Sbjct 1046 ATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATGGTGTCGGATGGCTCCACT 987 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||| || || || ||||| |||||||| Sbjct 986 TCCAATGTGATGGTCTTCCCAGTAAGTGTCTTAACAAAGATCTGCAT 940 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||||| ||||| || ||||| | | || || |||||||| |||||||| | Sbjct 254 CCTCCTCGCAGACGCAGTACCAAATGAAGTGTGGATTCTTTTTGAATATTGTAGTCAGAC 195 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || | ||| || || | | || ||||| ||||| || || || Sbjct 194 AGGGTGCGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCAGGTGGG 135 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||||||||| |||||| ||||| | ||| | ||||| | | |||||| Sbjct 134 ATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTGTCAGAGGGCTCCACT 75 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||| || ||||| |||||||||||||| Sbjct 74 TCCAGGGTAATAGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 28 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||| | || || || | | | ||||| || || || |||||||| | Sbjct 710 CCTCCTCGGAGACGGAGTACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCAGAC 651 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || || || || || || || | | |||| ||||| ||||| || ||||| Sbjct 650 AGAGTGCGGCCATCTTCAAGCTGCTTGCCTGCAAAGATGAGACGTTGTTGATCTGGAGGA 591 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||||||||| ||| | || | ||||| | ||| | || || | | ||| || Sbjct 590 ATTCCTTCTTTGTC-TTGAATCTTAGCTTTAACATTTTCAATAGTATCAGATGGCTCAAC 532 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| ||||| || ||||| ||||| || ||||| Sbjct 531 TTCCAAGGTTATTGTTTTGCCAGTAAGTGTTTTGACAAATATTTGCAT 484 >seq26980 Length=2195 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459 |||| ||||| || | | |||| ||||| ||||| || || || || ||||| Sbjct 1628 CGCAGCACTAAGTGCAAGGTTGATTCCTTCTGAATATTATAATCTGACAGTGTACGTCCA 1569 Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 || || || ||||| || | | | ||||| | ||||||||| ||||| |||||||||||| Sbjct 1568 TCTTCCAGCTGTTTTCCTGCAAAAATTAGCCTCTGTTGGTCAGGAGGGATACCTTCTTTG 1509 Query 138520 TCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAG 138578 || ||| |||||| |||| | ||| | || || | | || || || | || | Sbjct 1508 TC-TTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCTACTTCCAATGTGAT 1450 Query 138579 CGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| ||||||| || ||||||||||| ||||| Sbjct 1449 GGTTTTGCCAGTCAATGTCTTTACAAAAATTTGCAT 1414 >seq422991 Length=614 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || |||||||||||||||||||| || ||||| || || || |||||||| | | Sbjct 50 GATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGCTGTTTACCAGCA 109 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | || || ||||| || || |||||||| || || ||| || ||||| Sbjct 110 AAGATCAATCGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATCTTAGCTTTTACA 169 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | ||| | || || | | |||||||| | || | |||||||| || || || || Sbjct 170 TTTTCTATAGTATCAGAGGCTTCCACCTCAAGGGTAATGGTTTTACCCGTAAGGGTCTTG 229 Query 138601 ACAAAAATCTGCAT 138614 || ||||| ||||| Sbjct 230 ACGAAAATTTGCAT 243 >seq26981 Length=233 Score = 84.2 bits (92), Expect = 2e-11 Identities = 155/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 138391 CCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATA 138450 |||| ||||| | |||||||| | | || || |||||||| |||||||| | Sbjct 233 CCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGT 174 Query 138451 GTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATA 138510 ||||| || || | ||| || || | | || ||||| ||||| || ||||| || Sbjct 173 GTACGTCCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGAATG 114 Query 138511 CCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTC 138569 ||||||||||| ||| |||| | |||| | ||| | ||||| | | || || || Sbjct 113 CCTTCTTTGTC-TTGAATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTC 55 Query 138570 GACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | ||||| ||||| || ||||| ||||| || ||||| Sbjct 54 TAATGTAATTGTTTTTCCAGTAAGTGTTTTGACAAAGATTTGCAT 10 >seq26979 Length=899 Score = 82.4 bits (90), Expect = 8e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 138399 ACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGA 138458 |||||| ||||| || | | || |||||||| || || || || || || || Sbjct 294 ACGCAACACTAAGTGCAAAGTAGATTCCTTTTGGATATTATAATCTGACAGTGTGCGTCC 235 Query 138459 GTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTT 138518 || || ||||| || || | | || || | ||||| || ||||| || ||||| || Sbjct 234 ATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTT 175 Query 138519 GTCGGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCA 138577 ||| ||| | |||| |||| | ||| | || || | | ||||| || | || | Sbjct 174 GTCT-TGAATCTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCTAAAGTAA 116 Query 138578 GCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| |||||||| |||||||||||||| ||||| Sbjct 115 TCGTTTTTCCAGTCAGTGTTTTTACAAAAATTTGCAT 79 Score = 82.4 bits (90), Expect = 8e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 138399 ACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGA 138458 ||||| ||||| || | | || ||||||||||| || ||||| || ||| || Sbjct 522 ACGCAGGACTAAGTGCAGTGTAGATTCCTTTTGAATATTATAGTCAGACAGAGTGCGTCC 463 Query 138459 GTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTT 138518 || || || ||||| || | | || || | ||||| || ||||| |||||||| || Sbjct 462 ATCTTCTAGCTGTTTGCCAGCGAAAATCAGCCTTTGTTGATCTGGAGGAATACCTTCCTT 403 Query 138519 GTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCA 138577 || ||| |||||| |||| | ||| | || || | | ||||| || | || | Sbjct 402 ATC-CTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCTAATGTGA 344 Query 138578 GCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || ||||| ||||| |||||||| ||||| Sbjct 343 TTGTTTTGCCTGTCAGTGTTTTAACAAAAATTTGCAT 307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 492340835262720