Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq78339 156 3e-33 seq26979 120 2e-22 seq422991 111 1e-19 seq26980 91.5 1e-13 seq78338 89.7 4e-13 seq14063 86.0 4e-12 >seq78339 Length=2434 Score = 156 bits (172), Expect = 3e-33 Identities = 168/221 (76%), Gaps = 1/221 (0%) Strand=Plus/Minus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024 || || || ||||| ||||| |||||||| |||||||| ||| ||| | | ||||| Sbjct 1492 AATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCGTCT 1433 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 || ||||| || ||||| | |||||||| ||||| || ||||| ||||||||||| Sbjct 1432 TCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCT 1373 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 |||||| ||||||| |||| ||||| ||| | ||| || || || ||||||||| Sbjct 1372 TGAATTTTCGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTT 1313 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAT 15185 ||||| || || ||||| || ||||| ||||| ||||| || Sbjct 1312 TTACCCGTGAGTGTTTTCACGAAAATCTGCAT-TTTGATAT 1273 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||||||| | | |||| ||||||||| || || ||||| |||||||| | ||| Sbjct 2191 CCACCTCGCAAACGCAGTACTAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGT--CTG 2134 Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | || | | | | ||||| ||||| ||||| || | || | ||| ||||| || | Sbjct 2133 ATAAAGTACGCCCATCTTCCAATTGCTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGG 2074 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| || || || || ||| || |||||| |||| || || || || | Sbjct 2073 GAATGCCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCA 2014 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | || | ||| || || || ||||| || || || ||||| ||||||||| Sbjct 2013 CCTCCAGGGTTATAGTCTTGCCTGTTAGGGTCTTAACAAATATTTGCATA 1964 >seq26979 Length=899 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 ||||| || || ||||| || ||||| || || || || ||| | | | |||||| Sbjct 515 ACTAAGTGCAGTGTAGATTCCTTTTGAATATTATAGTCAGACAGAGTGCGTCCATCTTCT 456 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | |||||||||||| | |||| | ||||| || ||||| |||||||| || | Sbjct 455 AGCTGTTTGCCAGCGAAAATCAGCCTTTGTTGATCTGGAGGAATACCTTCCTTATCCTGA 396 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 ||||| || ||| ||||||| ||||| | ||| || ||||| || || ||||| Sbjct 395 ATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCTAATGTGATTGTTTTG 336 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 |||||||| ||||| |||||||||||||| Sbjct 335 CCTGTCAGTGTTTTAACAAAAATTTGCAT 307 Score = 114 bits (126), Expect = 9e-21 Identities = 157/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGT 15022 || ||||| || | ||||| || ||||| || || ||||| ||| | | || | | Sbjct 290 AACACTAAGTGCAAAGTAGATTCCTTTTGGATATTATAATC--TGACAGTGTGCGTCCAT 233 Query 15023 CTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGT 15082 |||| | ||| || |||||| | |||| | ||||| || ||||| |||||||||| Sbjct 232 CTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGT 173 Query 15083 CACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141 | ||| ||||| || ||| |||| || ||||| | ||| || ||||| ||||| Sbjct 172 CTTGAATCTTTGCCTTA-ACATTTTCAATTGTATCAGAAGCTTCCACTTCTAAAGTAATC 114 Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| || ||||| |||||||||||||||||||| Sbjct 113 GTTTTTCCAGTCAGTGTTTTTACAAAAATTTGCAT 79 Score = 93.3 bits (102), Expect = 3e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 15046 ATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATT 15105 ||||| | ||||||||| ||||| ||||| ||||| |||||| || ||| || Sbjct 893 ATCAATCTCTGTTGGTCTGGGGGAATGCCTTCTTTGTCTTGAATTTTTGCCTTAACATTT 834 Query 15106 TCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACA 15165 ||||| ||||| | ||| || || || || |||||||| || ||||| || |||||| Sbjct 833 TCTATTGTATCTGAAGCTTCAACTTCCAATGTGATGGTTTTGCCAGTCAGTGTCTTTACA 774 Query 15166 AAAATTTGCAT 15176 ||||||||||| Sbjct 773 AAAATTTGCAT 763 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTT 15025 || || || | |||||| |||||||| || ||||| || ||| || || | |||| Sbjct 743 ACCAAGTGCAAGGTAGATTCTTTTTGAATATTGTAGTC--TGACAAAGTGCGTCCATCTT 686 Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085 | | |||||| ||||| | || | | ||||||||| ||||| || ||||| || Sbjct 685 CAAGTTGTTTCCCAGCAAAAATAAGCCTCTGTTGGTCTGGGGGAATCCCCTCCTTATCTT 626 Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145 |||||| ||| ||| |||| || || || | || || || | |||||| || | Sbjct 625 GAATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAACTTCAAGGGTAATAGTCT 566 Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || || || ||||| |||||||||||||| Sbjct 565 TGCCAGTAAGTGTTTTAACAAAAATTTGCAT 535 >seq422991 Length=614 Score = 111 bits (122), Expect = 1e-19 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 14980 GTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAATTGTTTGC 15037 || || || ||||| |||||||| || || ||| || | ||||||| ||||| | Sbjct 47 GTGGATTCCTTTTGAATGTTGTAGTCA--GACAATGTACGTCCATCTTCTAGCTGTTTAC 104 Query 15038 CAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTT 15097 |||| | ||||| || || ||||| |||||| |||||||| || || || || Sbjct 105 CAGCAAAGATCAATCGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATCTTAGCTT 164 Query 15098 TTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAG 15157 ||||| ||||||||||||| ||| || || | ||||||||||||||| || || | Sbjct 165 TTACATTTTCTATAGTATCAGAGGCTTCCACCTCAAGGGTAATGGTTTTACCCGTAAGGG 224 Query 15158 TTTTTACAAAAATTTGCAT 15176 | || || ||||||||||| Sbjct 225 TCTTGACGAAAATTTGCAT 243 >seq26980 Length=2195 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTT 15025 ||||| || | ||| || || || || || || ||||| ||| | | || | |||| Sbjct 1622 ACTAAGTGCAAGGTTGATTCCTTCTGAATATTATAATC--TGACAGTGTACGTCCATCTT 1565 Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085 | | ||||| || || | || | | ||||||||| || || ||||| ||||| Sbjct 1564 CCAGCTGTTTTCCTGCAAAAATTAGCCTCTGTTGGTCAGGAGGGATACCTTCTTTGTCTT 1505 Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145 |||||| || ||| ||||||| ||||| | |||||| || || || ||||||| Sbjct 1504 GAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCTACTTCCAATGTGATGGTTT 1445 Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || |||| || ||||||||||||||||| Sbjct 1444 TGCCAGTCAATGTCTTTACAAAAATTTGCAT 1414 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || | | |||||||| | ||||| || |||||||| || || ||| | Sbjct 2096 CCACCTCTCAGACGCAGTACTAAATGTAAAGTAGATTCCTTTTGTATATTATAGTCGGAG 2037 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| | |||||| || || | || | | ||||| || ||| Sbjct 2036 AGTGTGCGTCCATCTTCAAGTTGTTTTCCTGCAAAAATAAGCCTTTGTTGATCTGGAGGA 1977 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| || || ||| ||| || ||| |||| || || || | ||| || Sbjct 1976 ATGCCTTCTTTATCCTGAATCTTGGCCTTGACATTTTCAATTGTGTCAGAAGCTTCCACT 1917 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| ||||| ||||| || || || || || |||||||||||||| Sbjct 1916 TCTAAAGTAATAGTTTTGCCAGTAAGTGTCTTCACAAAAATTTGCAT 1870 >seq78338 Length=1389 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || || ||||| || ||||| || || ||||| || ||| | | | ||||| Sbjct 692 ACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGAGTGCGGCCATCTTCA 633 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || ||||| || | || | ||| ||||| || ||||||||||| ||||| | Sbjct 632 AGCTGCTTGCCTGCAAAGATGAGACGTTGTTGATCTGGAGGAATTCCTTCTTTGTCTTGA 573 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || ||| ||| |||| |||||||| || || || ||||| || ||||| Sbjct 572 ATCTTAGCTTTAACATTTTCAATAGTATCAGATGGCTCAACTTCCAAGGTTATTGTTTTG 513 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| ||||| |||||||| Sbjct 512 CCAGTAAGTGTTTTGACAAATATTTGCAT 484 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||||||||| | ||||| |||||||| |||||||| || ||| | | | || || Sbjct 1149 AACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTC 1090 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 || ||||| ||||| | || | |||||||||||| ||||| || |||||||| Sbjct 1089 CAACTGTTTACCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTG 1030 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 || || || ||| |||| || || ||| || || || || || ||||| || Sbjct 1029 GATCTTAGCCTTAACATTTTCGATGGTGTCGGATGGCTCCACTTCCAATGTGATGGTCTT 970 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || || || ||||| || |||||| Sbjct 969 CCCAGTAAGTGTCTTAACAAAGATCTGCATA 939 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 ||||| || || || || |||||||| || |||||||| | | | | | ||||| Sbjct 464 ACTAAGTGCAGAGTCGACTCTTTTTGAATATTGTAATCAGACAAAGTGCGACCATCTTCC 405 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 ||||| || ||||| | || | |||||||||||| || || || ||||| || Sbjct 404 AATTGCTTACCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTGT 345 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || || ||| | || || || || |||||| || | ||||||||| || Sbjct 344 ATCTTAGCCTTCACATTCTCAATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTTG 285 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||| || || || ||||| ||||||||| Sbjct 284 CCTGTTAGGGTCTTGACAAATATTTGCATA 255 >seq14063 Length=7913 Score = 86.0 bits (94), Expect = 4e-12 Identities = 93/122 (76%), Gaps = 6/122 (5%) Strand=Plus/Plus Query 79323 GCCGAAGCGGGATTCTTTTACACCGGTTTTGGTGACAAAACAAAATGTTTCTATTGTGGC 79382 |||||||||||||||||||||||||| |||||||||||||| || ||||| |||| | Sbjct 6996 GCCGAAGCGGGATTCTTTTACACCGGCCAGGGTGACAAAACAAAGTGCTTCTACTGTGAC 7055 Query 79383 GGTGGCGTTTGCAAATGGGAATTAAATGATGAC---CCATGGGAACAGCACGCCATCTGG 79439 || ||| | | ||||| ||||| ||| || ||||| |||||||| |||| Sbjct 7056 GGCGGCCTCAAGGACTGGGA---GAATGACGACGTGCCGTGGGAGCAGCACGCGCGCTGG 7112 Query 79440 TT 79441 || Sbjct 7113 TT 7114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354638421514160