Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq227148 95.1 1e-14 >seq227148 Length=2115 Score = 95.1 bits (104), Expect = 1e-14 Identities = 252/382 (66%), Gaps = 10/382 (3%) Strand=Plus/Minus Query 116235 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 116294 ||| | ||| |||| || | || || ||||| | ||||| || | ||||||||||| Sbjct 1108 CAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCTGTGTCTCATATT 1049 Query 116295 AGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTT 116354 || || || || |||||||| || ||| || || | |||| ||||| Sbjct 1048 TGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTG 989 Query 116355 GGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATT 116414 || |||| |||||||||||| | | ||||| ||| ||| || | | |||| Sbjct 988 AGTTACAATCTTTGTGATTTCTTTTAACTTTTTAAAATTAAATCT---CTTATTTTCA-- 934 Query 116415 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAG--AGGTCTCATCCTTATCA 116472 ||| || | ||| || || || || || ||||| || | | ||| | || | | Sbjct 933 -ACAAACATGTTAAGTGCTATGGAAGCAAGGTTACAAACTGCCACTTCTTCTTCTGA--A 877 Query 116473 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 116532 ||||| | | || || || || | ||| || ||||| ||||| | || |||||| Sbjct 876 GTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATTGTGCCAAGATTTTTTTGA 817 Query 116533 TTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGG 116592 || ||| ||||||| |||||||| || | ||| ||||| || || ||||| |||| Sbjct 816 TTACTCTTCCTGTTACAAGCATCCTTATATAACATGTATGGTGTACCAGTCTCTACTTGG 757 Query 116593 GACTTGAGAATAGCCTTCCATA 116614 | | | ||| | |||||||| Sbjct 756 GCTTCTATAATTGACTTCCATA 735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608659143404160