Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq78339 122 2e-22 seq26980 122 2e-22 seq78338 120 7e-22 seq26979 113 1e-19 seq422991 100 7e-16 seq26981 95.1 3e-14 >seq78339 Length=2434 Score = 122 bits (134), Expect = 2e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || || || || || ||||||||||||| ||||||||| | ||||| | ||||| Sbjct 2177 CAGTACTAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCTGATAAAGTACGCCCATC 2118 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||||| ||||| ||||| ||||| ||||| || || || || ||| || ||| || Sbjct 2117 TTCCAATTGCTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGGAATGCCCTCTTTATC 2058 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 |||||||| ||| || ||| | |||||| | || || || |||| || || || Sbjct 2057 TTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACCTCCAGGGTTATAGT 1998 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || || || ||||| ||||| Sbjct 1997 CTTGCCTGTTAGGGTCTTAACAAATATTTG 1968 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || || ||||| || |||| |||||||||| || ||| | |||||| Sbjct 2404 AGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGAGTGCGGCCATCT 2345 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||| ||||| || || ||||||||||| || ||||| || || || || ||| Sbjct 2344 TCCAGTTGCTTGCCTGCAAAGATGAGACGTTGTTGGTCAGGGGGGATACCCTCCTTATCC 2285 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| || | ||||| | || |||||| |||| || || ||| Sbjct 2284 TGTATCTTAGCCTTCACATTCTCAATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTC 2225 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | ||||| ||||| ||||| Sbjct 2224 TTTCCTGTCAATGTTTTGACAAATATTTG 2196 Score = 111 bits (122), Expect = 4e-19 Identities = 153/211 (73%), Gaps = 5/211 (2%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| || || ||||| | ||||||||| | | ||| | || ||||||| || Sbjct 1484 GTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCGTCTTCCAATTG 1425 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 |||||| || || || | ||| || || || ||| ||| ||||| || ||||| || Sbjct 1424 CTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAAT-TT 1366 Query 199546 TTGCTTC-ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCG 199604 | |||| || ||||| ||||| | | ||| || ||||| || || || ||||||| Sbjct 1365 TCGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTACCCG 1306 Query 199605 TGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 |||| |||||||| ||||| || |||||| Sbjct 1305 TGAGTGTTTTCACGAAAATCTG---CATTTT 1278 >seq26980 Length=2195 Score = 122 bits (134), Expect = 2e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || | ||| | ||| || ||||| |||| || ||||| | | |||| ||||| Sbjct 1170 CAGCACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCCGATAGTGTCCGCCCATC 1111 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||| |||||||||||||| || || | ||| || || ||| ||| ||||| || Sbjct 1110 TTCCAGTTGCTTTCCGGCGAAAATTAGTCTCTGTTGATCTGGAGGAATGCCTTCCTTGTC 1051 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||||||||| ||||||| |||| || || | | |||||| ||||| ||||| || Sbjct 1050 TTGAATCTTTGCCTTCACGTTCTCGATTGTATCAGAAGCTTCTACTTCCAATGTGATGGT 991 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | ||||| || |||||||| Sbjct 990 TTTCCCAGTTAAGGTTTTTACGAAAATTTG 961 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 |||| || || | ||| | ||| |||||||| || | |||||||||| | || | | Sbjct 1403 AGTCGTAGTACCAAGTGTAAAGTAGACTCCTTCTGAATATTGTAGTCAGATAGTGTGCGT 1344 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||| ||||||||||| || || || || | ||||| || || |||||| ||| Sbjct 1343 CCATCTTCAAGCTGCTTTCCTGCAAAAATAAGTCTTTGCTGATCTGGGGGAATTCCCTCT 1284 Query 199532 CGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 |||||||| ||| || || || ||| | || || | | || || || | || Sbjct 1283 TTATCCTGAAT-TTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACTTCTAGAGT 1225 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| ||||| || || || || ||||| |||||||| Sbjct 1224 GATAGTCTTGCCAGTCAGTGTCTTCACGAAAATTTG 1189 Score = 96.9 bits (106), Expect = 8e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470 ||| | ||| || | ||| | || || ||||| || | || || || | || || | Sbjct 1632 AAGGCGCAGCACTAAGTGCAAGGTTGATTCCTTCTGAATATTATAATCTGACAGTGTACG 1573 Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 ||||||||||||||| ||||| || || || || | ||| ||||| ||| || ||||| Sbjct 1572 TCCATCTTCCAGCTGTTTTCCTGCAAAAATTAGCCTCTGTTGGTCAGGAGGGATACCTTC 1513 Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 | || ||||| ||| ||| || ||| | || || | | |||||| ||||| || Sbjct 1512 TTTGTCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCTACTTCCAATGT 1453 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || || | || || ||||||||||| Sbjct 1452 GATGGTTTTGCCAGTCAATGTCTTTACAAAAATTTG 1417 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491 ||| || |||||||| | || ||||| | | || | ||||||||| || || ||||| Sbjct 2067 AGTAGATTCCTTTTGTATATTATAGTCGGAGAGTGTGCGTCCATCTTCAAGTTGTTTTCC 2008 Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551 || || || || | || || || ||| ||| |||||| ||||||||||| ||| Sbjct 2007 TGCAAAAATAAGCCTTTGTTGATCTGGAGGAATGCCTTCTTTATCCTGAATCTTGGCCTT 1948 Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611 || ||| | ||||| | | ||| || || || || || || || || || || || Sbjct 1947 GACATTTTCAATTGTGTCAGAAGCTTCCACTTCTAAAGTAATAGTTTTGCCAGTAAGTGT 1888 Query 199612 TTTCACAAAAATTTG 199626 |||||||||||||| Sbjct 1887 CTTCACAAAAATTTG 1873 >seq78338 Length=1389 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| ||||||||||| ||||| | ||||| |||| |||||| | |||||| Sbjct 467 AGCACTAAGTGCAGAGTCGACTCTTTTTGAATATTGTAATCAGACAAAGTGCGACCATCT 408 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| ||||| || || || ||||||||||| ||||| || || || || ||| Sbjct 407 TCCAATTGCTTACCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTTATCC 348 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| || | ||||| | || |||||| |||| || || ||| Sbjct 347 TGTATCTTAGCCTTCACATTCTCAATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTC 288 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || ||||| ||||| Sbjct 287 TTGCCTGTTAGGGTCTTGACAAATATTTG 259 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || || ||||| || |||| |||||||||| || ||| | |||||| Sbjct 695 AGTACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGAGTGCGGCCATCT 636 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || ||||||||||| || || || ||| |||||||||| || Sbjct 635 TCAAGCTGCTTGCCTGCAAAGATGAGACGTTGTTGATCTGGAGGAATTCCTTCTTTGTCT 576 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| || || ||| | || || | || || || ||||| || || || Sbjct 575 TGAATCTTAGCTTTAACATTTTCAATAGTATCAGATGGCTCAACTTCCAAGGTTATTGTT 516 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || ||||| ||||| ||||| Sbjct 515 TTGCCAGTAAGTGTTTTGACAAATATTTG 487 Score = 96.9 bits (106), Expect = 8e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| | ||| ||||| || || | |||||||||| | ||| | ||||| |||||||| Sbjct 915 GTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGACCATCCTCCAGCTG 856 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || ||||| || || || || ||||| || ||| || ||| || || ||||| Sbjct 855 CTTGCCAGCGAAAATTAGGCGTTGTTGGTCTGGGGGAATACCCTCTTTGTCTTGGATCTT 796 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 | || || ||| | ||||||| | ||| || || || ||||| || || || || Sbjct 795 TGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTTGCCTGT 736 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 ||| || || ||||| || || Sbjct 735 GAGTGTCTTTACAAAGATCTG 715 >seq26979 Length=899 Score = 113 bits (124), Expect = 1e-19 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| | ||| || || || |||||||| | || ||||||| || ||| | |||||| Sbjct 519 CAGGACTAAGTGCAGTGTAGATTCCTTTTGAATATTATAGTCAGACAGAGTGCGTCCATC 460 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||| ||||| || || ||||| || || | || || || ||| ||| ||||| || Sbjct 459 TTCTAGCTGTTTGCCAGCGAAAATCAGCCTTTGTTGATCTGGAGGAATACCTTCCTTATC 400 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 |||||| ||| ||| || ||| | || || | | ||| || || || ||||| || Sbjct 399 CTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCTAATGTGATTGT 340 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || ||||| ||||||||||| Sbjct 339 TTTGCCTGTCAGTGTTTTAACAAAAATTTG 310 Score = 105 bits (116), Expect = 2e-17 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| | ||| || |||||||||| || || || | || || | |||||||||||| || Sbjct 282 GTGCAAAGTAGATTCCTTTTGGATATTATAATCTGACAGTGTGCGTCCATCTTCCAGTTG 223 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 |||||| ||||| || || | || || || ||| ||| ||||| || |||||||| Sbjct 222 CTTTCCAGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTT 163 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 | ||| || ||| | || || | | ||| || || || || ||||| || || || Sbjct 162 TGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCTAAAGTAATCGTTTTTCCAGT 103 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 || ||||| ||||||||||| Sbjct 102 CAGTGTTTTTACAAAAATTTG 82 Score = 86.0 bits (94), Expect = 1e-11 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || | ||| | || || || ||||| | |||||||| | |||||| | |||||| Sbjct 747 CAGTACCAAGTGCAAGGTAGATTCTTTTTGAATATTGTAGTCTGACAAAGTGCGTCCATC 688 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||| || || || || || || || || | ||| ||||| || ||| || || || Sbjct 687 TTCAAGTTGTTTCCCAGCAAAAATAAGCCTCTGTTGGTCTGGGGGAATCCCCTCCTTATC 628 Query 199537 CTGAATCTTTTGCTTCA-CGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCG 199595 ||||| |||||||| | | ||| | ||||| | | || || || | || || | Sbjct 627 TTGAAT-TTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAACTTCAAGGGTAATAG 569 Query 199596 TCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||| || || || ||||| ||||||||||| Sbjct 568 TCTTGCCAGTAAGTGTTTTAACAAAAATTTG 538 >seq422991 Length=614 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||||| || | || || |||||||| | ||||||||||| ||| || Sbjct 23 CGAAGCCGAAGCACAAGATGTAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTA 82 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||| ||||| || || || ||||| | || |||||||| || ||| ||| Sbjct 83 CGTCCATCTTCTAGCTGTTTACCAGCAAAGATCAATCGTTGCTGGTCTGGTGGAATACCT 142 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| || || ||| | || || | | ||| || || | Sbjct 143 TCCTTATCTTGGATCTTAGCTTTTACATTTTCTATAGTATCAGAGGCTTCCACCTCAAGG 202 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || |||||||| || || || || |||||||| Sbjct 203 GTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTG 240 >seq26981 Length=233 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491 ||| || || ||||| | |||||||||| | || | ||||||||||| ||||| || Sbjct 207 AGTAGATTCTTTTTGAATATTGTAGTCAGAAAGTGTACGTCCATCTTCCAATTGCTTGCC 148 Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551 ||||| || ||||| || || || ||| ||| |||||| || ||||| || ||| Sbjct 147 CGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGAATTTTAGCCTT 88 Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611 || ||| | ||||| | | ||| || || || || || || || || || || || Sbjct 87 TACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAATGTAATTGTTTTTCCAGTAAGTGT 28 Query 199612 TTTCACAAAAATTTG 199626 ||| ||||| ||||| Sbjct 27 TTTGACAAAGATTTG 13 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1169372623875792