Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq19446 156 5e-33 seq78338 102 9e-17 seq78339 95.1 1e-14 seq26980 95.1 1e-14 seq26979 95.1 1e-14 >seq19446 Length=4212 Score = 156 bits (172), Expect = 5e-33 Identities = 786/1234 (64%), Gaps = 54/1234 (4%) Strand=Plus/Plus Query 98734 AAAGTTACGGGGGCTTATTTTGTAGAATGGGGTGTTTACGATCGCAAATTTCCAGCAGAT 98793 |||||| ||| || || || ||||||||||| || || | | ||||| || | ||| Sbjct 1643 AAAGTTGTGGGTGCCTACTTCGTAGAATGGGGCGTCTATCCTAGGAAATTCCCCGTGGAT 1702 Query 98794 AAAGTGCCTATCCCCAATTTGACACACCTTTTGTATGGTTTTATCCCCATTTGCGGAGGC 98853 | ||||| || ||| | || || | | || || ||||| || |||||||| || Sbjct 1703 CGCATACCTATACCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGT 1762 Query 98854 GACGGTATAAACGACAGTCTAAAACA-AGTGCCGGGATCTTTTGAGACGTTACAAAAATC 98912 ||||| || || ||||| ||||| | | || || | ||| || | | || || Sbjct 1763 GACGGCATCAATGACAGCTTAAAAGAGATTGAAGGCAGTTTTCAAG-CACTGCAGCGGTC 1821 Query 98913 GTGCGATAAGAGAGATGATTTCAAGGTGAGCATCCACGATATTTACGGTGCTCTACAGAA 98972 ||| | || || ||||| || ||||||||| | | || |||| || Sbjct 1822 CTGCAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAA 1881 Query 98973 ACCACAACAGGG--TGTCTCCGATTATAACGAGCCTTACCGTGGCAATTTCGGACAGCTT 99030 ||||||| | || ||||| | | |||||||| ||| ||||| || || || | Sbjct 1882 ACCACAAAAAGGATTGTCTTCA--TGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTA 1939 Query 99031 ATGGCCATACGTAAACACAA-----CCCACATCTAAAAATCCTACCCAGTATCGGTGGTT 99085 ||| | || |||| |||| ||| | |||| || || ||| ||| ||||| | Sbjct 1940 ATGTC-AT---TAAA-ACAAGCTCGCCCTGAATTAAAGATTCTTCCCTCTATTGGTGGGT 1994 Query 99086 GGACTCTTAGCGACCCCTTCTATTTTTTCGCCGATGATTACAAGCGCAAAGTGTTCGTAG 99145 |||| ||| || || |||| ||||| | || | | ||| | | | || || Sbjct 1995 GGACGCTTGCTGATCCTTTCTTCTTTTTTGTTGACAAATCTAAGAGAACACGATTTGTGC 2054 Query 99146 ACTCGGTTCGTGAATTCCTACAGGTGTGGAAATTTTTCGACGGTGTAGACATCGACTGGG 99205 | || || || ||||| | |||||||| ||||| ||||| || ||||| |||| Sbjct 2055 AGTCAGTAAAGGAGTTCCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGG 2114 Query 99206 AGTTTCCTGGCGGAAAGGGGGCCAACCCTGAAGTAGGAAATCCTAATGAGGACGGAAACA 99265 |||| ||||| || || || || |||||||| | || | || || || || | Sbjct 2115 AGTTCCCTGGTGGCAAAGGTGCTAACCCTGATCTCGGTAGCCCA---GAAGATGGTGATT 2171 Query 99266 CTTATGTCACACTTCTGCAAGAGCTTCGTTTGATGCTTGACGAATTGGGTGTGGCCAATA 99325 ||||| | | || |||| | ||| |||||| || ||| | | | || | Sbjct 2172 GCTATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGATGAACTCTCAG---CTAAGA 2228 Query 99326 AACGTGTT---TACGAACTGACAAGTGCCGTGGGCGCCGGTTACGATAAAATCGACGTGG 99382 | || |||||| | || ||| | |||| || | ||||||||| | || | Sbjct 2229 ATGGTAAGAAATACGAATTAACTTCTGCTATTAGCGCTGGATGGGATAAAATCCAAGTCG 2288 Query 99383 TCGATTACTCTACAGCCAG--TCAATATT---TGGACCATGTGTTTTTAATGAGTTACGA 99437 | || |||| || || |||| ||| |||| ||| | || || |||||||| || Sbjct 2289 TTGA-----CTACGGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTATGA 2343 Query 99438 TTTTAAAGGCGCCTGGTCCAACACCGACT-TGGGTCATCAAACACCATTGTATGCACCAT 99496 || || || |||||||| ||| ||| | || ||||||||||||||||| || || Sbjct 2344 CTTCAAGGGAGCCTGGTCAAACGAT-ACTCTTGGACATCAAACACCATTGTACGCGCCTG 2402 Query 99497 CGTGGAACTCCGAAGAGAGATACACAACCGATTATGCGGTTAAACAGCTATTAAAGAAAA 99556 | ||||| || | || | |||||| | || | | || ||| | | || | Sbjct 2403 CATGGAATCCCAAGGAAACCTACACATCTGACTTCGGAGTAAAATACTTGTTGGCACAGG 2462 Query 99557 AAGTGCCTTCTCACAAGATTGTAGTGGGAGTCGCCATGTACGGCAGAGGATGGAGTGGAG 99616 |||| | || | ||||||||||| || || || ||||| || | || |||| ||| | Sbjct 2463 GAGTGAATCCTAAGAAGATTGTAGTCGGTGTTGCTATGTATGGTCGTGGCTGGACTGGCG 2522 Query 99617 TGCATGACTACAAAAATAATAACGTTTTTACGGGTGTGGCCACGGGACCGGTAAAAGGCA 99676 | ||||| ||| || | || | || || || || || ||||| || ||||| | Sbjct 2523 TCCATGATTACGAAGACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGTA 2582 Query 99677 CCTGGGAAAACGGTGTTGTTGATTATAGGCAGGT--CGAA-GA----GCTCAAAAACAAC 99729 | ||| || |||| || ||||| || ||| || | |||| || |||||| | Sbjct 2583 CTTGGCAAGACGGAGTGGTTGACTACAGGGAGATTGCGAATGAAATTGCTCAA----GGC 2638 Query 99730 AATTACACATACGCATACGACAAAGTGGCCGAGGCGGCATATATTTACGGTGGCGCCGAC 99789 || | | | |||||||| || ||| | || | || | | | | | | Sbjct 2639 AAGTGGGAGTTCCATTACGACAATGTCGCCCAAGCACCTTACGTCTTC--AGACCATCAA 2696 Query 99790 CAGGCGTTGAATTTAATTTCTTACGACGACTCATCGTCTGTACTAGCAAAAGGTAATTAC 99849 | || | || | | |||| ||| | | || || | | ||| ||||| || Sbjct 2697 CTGGAG----ATCTTGTAACTTATGACAATGCTAGATCGGTTATTGAAAAGGGTAAATAT 2752 Query 99850 GTTTTACAAAACAATCTCGGAGGTTTATTTGCTTGGGAAATCGATGCCGACAACGGTGAC 99909 || | | ||||| || || ||| | ||||||||||||||||| || || |||||||| Sbjct 2753 GTAAGAAATAACAAGCTAGGCGGTCTCTTTGCTTGGGAAATCGACGCTGATAACGGTGAT 2812 Query 99910 TTGTTAAACGCCATGAACACAGGTTTGGGTAACA 99943 | | || |||||||||| ||| | ||||||| Sbjct 2813 CTACTGAATGCCATGAACATGGGTCTCGGTAACA 2846 >seq78338 Length=1389 Score = 102 bits (112), Expect = 9e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||| | ||| || |||| ||||| || ||| || || ||||||||||| || Sbjct 938 CCTCCTCGCAGACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 879 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| || | || || ||||||||||| ||||| || | ||| || ||||| | || Sbjct 878 AGAGTACGACCATCCTCCAGCTGCTTGCCAGCGAAAATTAGGCGTTGTTGGTCTGGGGGA 819 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGC-GTCGCCACCGTGTCGCTCGATTCCAC 46545 | | ||| ||||| |||||| | ||| | | | | | ||||| | ||| || Sbjct 818 ATACCCTCTTTGTCTTGGATCTT-TGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAAC 760 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||||| |||||||| || || || || |||||||| ||||| Sbjct 759 TTCTAATGTGATAGTTTTGCCTGTGAGTGTCTTTACAAAGATCTGCAT 712 Score = 102 bits (112), Expect = 9e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 46390 ATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTG 46449 |||||| ||| || |||||||| |||||||| || |||||||| | || || | ||| Sbjct 1143 ATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAACTG 1084 Query 46450 CTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTT 46509 || || || || || | ||||| ||||| | || | || ||||||||| |||||| Sbjct 1083 TTTACCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTT 1024 Query 46510 CTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 ||| | | | | |||||| | ||||| |||| |||||||| || || || Sbjct 1023 AGCCTTAACATTTTCGATGGTGTCGGATGGCTCCACTTCCAATGTGATGGTCTTCCCAGT 964 Query 46570 CAGCGTTTTAACAAAGATTTGCAT 46593 || || ||||||||||| ||||| Sbjct 963 AAGTGTCTTAACAAAGATCTGCAT 940 >seq78339 Length=2434 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 |||||| |||| || | ||| || ||||| || ||||||||||| |||||||| | Sbjct 1496 ACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCC 1437 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| || | ||||| || || || ||||| || || || || | || | || ||||| Sbjct 1436 GTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTT 1377 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| || ||| || | | | | |||||| | ||| || |||| || || Sbjct 1376 GTCTTGAATTTTCGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAAT 1317 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 |||||| ||||| || ||||| || || || ||||||||| Sbjct 1316 GGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCATTTTG 1277 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||| | ||||| |||| ||| | ||| || ||||| ||||||||||| || Sbjct 1963 CCTCCTCTCAGACGCAGTACCAAATGAAGTGTCGATTCTTTTTGAATATTGTAGTCAGAC 1904 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || | |||||||| ||||| || | || || || || | || Sbjct 1903 AGGGTGCGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGA 1844 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || || ||||| ||| || ||| | | | | ||||| | ||| || Sbjct 1843 ATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACT 1784 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||| || ||||| || || || |||||||||||||||||||| Sbjct 1783 TCTAACGTAATAGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 1737 Score = 89.7 bits (98), Expect = 6e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || |||| ||||||| || ||||| | || |||||||||||| |||||||| ||| Sbjct 2191 CCACCTCGCAAACGCAGTACTAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCTGAT 2132 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | ||| ||| | || || | ||||||||||| || || | || || || || | || Sbjct 2131 AAAGTACGCCCATCTTCCAATTGCTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGGA 2072 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||| || || ||||| ||| | | | | ||||| | ||||| Sbjct 2071 ATGCCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACC 2012 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || || || ||||| || || || |||||||| |||||||| Sbjct 2011 TCCAGGGTTATAGTCTTGCCTGTTAGGGTCTTAACAAATATTTGCAT 1965 Score = 89.7 bits (98), Expect = 6e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || |||||||||||||| || |||||||| | || || || |||||||| || || Sbjct 2384 CTCTTTCTGGATATTGTAGTCAGACAGAGTGCGGCCATCTTCCAGTTGCTTGCCTGCAAA 2325 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | || || ||||| | || | | |||||| ||| ||||| ||| | | Sbjct 2324 GATGAGACGTTGTTGGTCAGGGGGGATACCCTCCTTATCCTGTATCTTAGCCTTCACATT 2265 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||| | ||| || |||| || ||||| || || |||| ||||| || Sbjct 2264 CTCAATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTTTCCTGTCAATGTTTTGAC 2205 Query 46582 AAAGATTTGCAT 46593 ||| |||||||| Sbjct 2204 AAATATTTGCAT 2193 >seq26980 Length=2195 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || || | ||||| ||| | ||||| ||| ||||| |||||||| ||||| ||| Sbjct 1184 CCACCCCTGAGACGCAGCACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCCGAT 1125 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || ||| | || || || ||||| |||||||| || | | ||| || || | || Sbjct 1124 AGTGTCCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATTAGTCTCTGTTGATCTGGAGGA 1065 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || |||||||| ||||| ||| | || | | || || | ||| || Sbjct 1064 ATGCCTTCCTTGTCTTGAATCTTTGCCTTCACGTTCTCGATTGTATCAGAAGCTTCTACT 1005 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| ||||||||||| || || | ||||| || || |||||||| Sbjct 1004 TCCAATGTGATGGTTTTCCCAGTTAAGGTTTTTACGAAAATTTGCAT 958 >seq26979 Length=899 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || |||| ||||||||| | ||||| ||| |||||||||||||| || || || Sbjct 305 CCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCCTTTTGGATATTATAATCTGAC 246 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || || ||||| || ||||| |||| | || || || | || Sbjct 245 AGTGTGCGTCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCTGGAGGA 186 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || |||||||| ||||| ||| | | | | || || | |||||| Sbjct 185 ATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACT 126 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || || ||||| || ||||| ||||| ||||| |||||||| Sbjct 125 TCTAAAGTAATCGTTTTTCCAGTCAGTGTTTTTACAAAAATTTGCAT 79 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560771773115520