Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq227148 145 9e-30 >seq227148 Length=2115 Score = 145 bits (160), Expect = 9e-30 Identities = 897/1427 (63%), Gaps = 37/1427 (3%) Strand=Plus/Minus Query 105907 AAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTC 105966 ||| ||||| | | | |||||| | || || || | || |||||||||| |||| Sbjct 1468 AAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAAAGATTC 1409 Query 105967 ATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTT 106026 | | ||||| | |||||||| || ||||| || ||||| || || ||||| ||| || Sbjct 1408 AGTGTTACCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGGGCTATCAACAGAGAATT 1349 Query 106027 ACGAAGACCCT--TTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTG 106084 || | ||| | |||||| || || ||||| || ||||||| | || | Sbjct 1348 GCGCAAACCGTGTTTTCCT--ATCTTGTCTTTGAGGGCAGCCCAGTCCCAA---AGGTCT 1294 Query 106085 GTTTCACCTT---CCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCA 106141 || | || ||||||||||| | || || | |||||| | ||| || | | Sbjct 1293 GTAGGAGTTTTGTCCCACATATCATACTGTAGGATACCTTGGCTTGCTGGACTCCCTTGA 1234 Query 106142 AATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGA 106201 |||| || | |||| ||| || |||||||| || || || | | | | | Sbjct 1233 TATGTGCTGTATGTGCCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCACCATAA 1174 Query 106202 TACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAG 106261 || || |||||||| || | ||| | | | |||| || || | | ||| Sbjct 1173 TAAATTGTTTCAAATATTTGTTGATTGAGATGTATTGCTTTTTCACTTTCGTAAG-GTAT 1115 Query 106262 CGGCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCG 106320 || ||| | ||| |||| || | || |||||||| | ||||||||||||||||| Sbjct 1114 TCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCTGTGTCT 1055 Query 106321 CATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTT 106377 |||||| || || || ||| || |||||||| || ||||||||| ||| Sbjct 1054 CATATTTGAAGTTTTTGCT---TCAGGGACAGGATAAAAGTTAACATCAATGACTTTGTT 998 Query 106378 TAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGT 106437 || ||||| || ||||||||||||||||| | | |||| | ||| ||| | Sbjct 997 TAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAACTTTTTAAAATTAAA--------T 946 Query 106438 CTCTTCATT--GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCA 106495 ||||| || ||| || | ||| || || || || | || ||||| ||| || Sbjct 945 CTCTTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTACAAACTGCCACTTCT 886 Query 106496 TCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAA 106555 || | ||||| | | || || || || | ||| || ||||| || || | | Sbjct 885 TCTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATTGTGCCAAGA 826 Query 106556 TTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTC 106615 || ||||| |||||||| |||| || |||||||| || | |||||| || || || ||| Sbjct 825 TTTTTTTGATTACTCTTCCTGTTACAAGCATCCTTATATAACATGTATGGTGTACCAGTC 766 Query 106616 TCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCGGCTGGTACAATGGCGT-TGGC 106674 || || | | | ||||| |||||| | || ||| | || || | | Sbjct 765 TCTACTTGGGCTTCTATAATTGACTTCCATAACTCTTGAGCTCGGAC-TTGTTTTATAAA 707 Query 106675 CCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGA 106734 ||| || | || || || || || || |||| || ||||| || ||| | Sbjct 706 TCGTGTTTCTTCTTCATATTTGGTATATAGTTCTTCGAATTCCTCTCCATAACAGTCAGC 647 Query 106735 GAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTT 106794 ||| || || | | ||||| | ||| ||| || | | || || | || Sbjct 646 GAGGCCGGGACAATCATGAGGACACATGAGACTCCAAACGTCATCATTTTCTACTCTTTT 587 Query 106795 CATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTC 106854 ||| || || || |||||||| | | |||| || |||||| | ||||| | Sbjct 586 CATAAACAGATCAGGAATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTT 527 Query 106855 ACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATA 106914 |||| || ||| || | |||||| | || ||||| ||||| ||||| | ||| Sbjct 526 ACCTGTATTCTTCTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCTCTAAATA 467 Query 106915 GACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGT 106970 | ||| | | || | || | ||| |||||| |||||| | || || || Sbjct 466 AATTGCAAATGCACCAGGGCGTTTG-TTTCCACCTTGATCTACATATCTGGCAGTATTGT 408 Query 106971 TAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAG 107030 || | || | | |||||| | | ||||| || ||||| || || || || Sbjct 407 TATACACTCTCAACATTGGCACTAGACCATTCGAGACGCCATTAGTGCCAGCTATGTAAG 348 Query 107031 ATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTT 107090 | | ||||| | ||| | || | || || || ||||| | || || ||| Sbjct 347 AACCCTGAGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATTA 288 Query 107091 GCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAA 107150 ||||||| | | ||| || | ||||| | || || || || | || |||| Sbjct 287 ATGCACACTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCATAGCTATAA 228 Query 107151 GGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGT 107210 |||||||| ||| | ||| || | ||||||| | || ||| || || || |||||| Sbjct 227 GGAAGCAAGAGGAAAGCTGTGGCCGTGGTGTAGCTGCTGAGAACAGTGTAGGGCTTGCGT 168 Query 107211 GAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCC 107269 | | || ||| | | |||||| | | || || | | || |||||||||||| Sbjct 167 GTGT-AAAATATTTCTCCGACATCATATTATAAGTATTGATTGCACTATCAATGTCTTCA 109 Query 107270 CCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTC 107316 ||||| || || || | || | ||||| ||||| ||| ||| |||| Sbjct 108 CCGTGAATACCTATTGAGACTCTCATAAGCATGTGTTGAGGTCTTTC 62 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 585318653722240