Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq227148 511 5e-140 seq36366 132 5e-26 seq242670 91.5 2e-13 >seq227148 Length=2115 Score = 511 bits (566), Expect = 5e-140 Identities = 1186/1786 (66%), Gaps = 33/1786 (2%) Strand=Plus/Minus Query 46972 CTTTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATAC 47031 |||| || |||||||||| ||| | ||| |||| |||||| ||||| || ||||| | Sbjct 1829 CTTTATCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTCCGTAAGTAGTACATTC 1770 Query 47032 CAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAG 47091 | || |||||||| | |||| | | |||||| ||| |||| ||| ||| ||| Sbjct 1769 CTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATAGACGTTAGTTTCCCATAGTTAG 1710 Query 47092 GTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTG 47151 ||| | || ||| || |||| |||||| || || || ||||| || ||||||||||| | Sbjct 1709 GTTTAGCAACATGTATGTTAAAAGATTGGCTTTGGTCTATAAACGCTCCTCTATCAGCCG 1650 Query 47152 CCATATCTAAAATAACCCTTT--GTGGTATCTCCCATACTGTTTTATAAATTTGTTTAAT 47209 |||| | || | ||| ||| ||||||||||| ||||| || | | | | || Sbjct 1649 CCATCTGTATGG--ATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCTCTTAT 1592 Query 47210 GTCTTCTGGGAGATTAG---TATTTTGAATAGATCCTCCgttttctataattttgttttt 47266 |||| || | || | ||| ||| |||||||| ||| | || || ||||| Sbjct 1591 TTCTTTAGGAATTTTTGCAATATCTTGTATAGATCCATTGTTGTAAATTATAAGATTTTT 1532 Query 47267 taattcatttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAAT 47326 | || | ||| | | ||| || | | ||| ||| | || || | Sbjct 1531 CATATCTTCATCCCATAAATCAGCCCGAGTCAAATCAGTGAGAAGGTGATGGTTCACTAC 1472 Query 47327 TTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGA 47386 ||||||||||||||| ||||| | || ||||| |||| | ||||| | ||| Sbjct 1471 AGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAAAGA 1412 Query 47387 TTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCT 47446 |||| | || |||| |||||| ||||| || || || ||||| | || | || | Sbjct 1411 TTCAGTGTTACCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGGGCTATCAACAGAGA 1352 Query 47447 ATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGA 47506 ||| | | || | |||| ||||| ||| |||||||| |||| Sbjct 1351 ATTGCGCAAACCGTGTTTTCCTATCTTGTCTTTGAGGGCAGCCCAGTCCCAAAGGTCTGT 1292 Query 47507 TGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATA 47566 ||| | ||| | |||||| || || || |||| ||| ||| || | ||| Sbjct 1291 AGGAGTTTTGTCCCACATATCATACTGTAGGATACCTTGGCTTGCTGGACTCCCTTGATA 1232 Query 47567 TGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATA 47626 ||| | || | || | | || || | ||||||||| ||||| ||||||| |||||| Sbjct 1231 TGTGCTGTATGTGCCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCACCATAATA 1172 Query 47627 TATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGATGATTCAAAAGGATANNN 47686 |||||||||||||||| | || |||| |||||| | ||| |||| Sbjct 1171 AATTGTTTCAAATATTTGTTGATTGAGATGTATTGCTTTTTCACTTTCGTAAGGTATTCT 1112 Query 47687 NNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTTTT 47746 || | |||||||| || ||||||||||||||||| ||||| || | | Sbjct 1111 CATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCTGTGTCTCAT 1052 Query 47747 ATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAGANN 47806 ||| ||| | ||||| || | ||||| ||| | ||| || | ||| |||| | Sbjct 1051 ATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTTTGTTTAAATT 992 Query 47807 NNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAACTTGTTATTTATAAC 47866 |||||| |||| || ||||||| ||| | |||||| ||| Sbjct 991 TTGAGTTACAATCTTTGTGATTTCTTTTAACTTTTTAAAATTAAATCTCTTATTTTCAAC 932 Query 47867 AAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATA 47926 |||| | ||||||||||| || || || ||||| || || || || | | ||| || Sbjct 931 AAACATGTTAAGTGCTATGGAAGCAAGGTTACAAACTGCCACTTCTTCTTCTGAAGTGTA 872 Query 47927 TTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATT 47986 ||| | | |||| || ||||| | |||||| || || || | ||||| |||||| | Sbjct 871 TTGCACAACCTCAGTGCAAAGATTGCTACATTTAATTGTGCCAAGATTTTTTTGATTACT 812 Query 47987 NNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTC 48046 ||||||| || ||||| || | ||| | ||||| ||||| |||| || | ||| Sbjct 811 CTTCCTGTTACAAGCATCCTTATATAACATGTATGGTGTACCAGTCTCTACTTGGGCTTC 752 Query 48047 AATGATAGATTTCCAAACAGTCCT-AGC-----CTT-TATAACAGCTCTAGCTTTATTAT 48099 || || || ||||| | | || | ||| ||| | | | | || | || Sbjct 751 TATAATTGACTTCCATA-ACTCTTGAGCTCGGACTTGTTTTATAAATCGTGTTT------ 699 Query 48100 CATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATT-ATCTAACCCA 48158 | | ||| ||||| ||||||| | || ||||| || ||||| ||| | | | | || Sbjct 698 CTTCTTCATATTTGGTATATAGTTCTTCGAATTCCTCTCCATA-ACAGTCAGCGAGGCCG 640 Query 48159 GGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAAT 48218 ||||| |||| ||||||||| | |||| | |||||||||| |||||| ||||||| Sbjct 639 GGACAATCATGAGGACACATGAGACTCCAAACGTCATCATTTTCTACTCTTTTCATAAAC 580 Query 48219 ATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTA 48278 | ||| || ||||| | ||| ||| | || |||| ||| | |||||| || || || Sbjct 579 AGATCAGGAATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTA 520 Query 48279 TTCCT-TTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGC 48337 ||| | ||||| | ||||| || | ||| || |||||||| || |||||||| ||||| Sbjct 519 TTCTTCTTTAAATCTAAGAAC-TCAAATATGTCCGCATGCCAAGGCTCTAAATAAATTGC 461 Query 48338 CATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAAC 48397 | | |||| || ||||| || || |||||||||| ||||||||||||||||||||| || Sbjct 460 AAATGCACCAGGGCGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTATACAC 401 Query 48398 TCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACT 48457 ||| |||||||| || | |||||| || | ||||| || || | || ||| || Sbjct 400 TCTCAACATTGGCACTAGACCATTCGAGACGCCATTAGTGCCAGCTATGTAAGAACCCTG 341 Query 48458 AGCTCTTAT---ATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGC 48514 |||||| || || || || || |||||| ||||| || |||||| |||| || Sbjct 340 AGCTCTGATGCAATGTGTA--TGTAA-ACCTATGCCACCAGCAGATTTAGAAATTAATGC 284 Query 48515 ACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAA 48574 |||| |||| | |||||| |||| ||||| || ||||| ||| ||||| || || || Sbjct 283 ACACTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAA 224 Query 48575 ACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAAT 48634 ||| || | || || | || ||| || | ||| || ||| || | Sbjct 223 GCAAGAGGAAAGCTGTGGCCGTGGTGTAGCTGCTGAGAACAGTGTAGGGCTTGCGTGTGT 164 Query 48635 AAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATC-CCATTGAT 48693 ||| ||||||| || | || ||||| || | || || ||| || || || | | Sbjct 163 AAAATATTTCTCCGACATCATATTATAAGTATTGATTGCACTATCAATGTCTTCACCG-T 105 Query 48694 GTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAAC 48739 | |||||||| || || | ||| | ||| | ||||||||||||||| Sbjct 104 GAATACCTATTGAGACTCTCATAAGCATGTGTTGAGGTCTTTCAAC 59 >seq36366 Length=4232 Score = 132 bits (146), Expect = 5e-26 Identities = 156/210 (74%), Gaps = 6/210 (3%) Strand=Plus/Plus Query 19233 ATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAA 19292 ||||| || || |||||| |||||| |||||||||| |||||| ||||| || ||||| Sbjct 3243 ATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGAAA 3302 Query 19293 TCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATT 19352 || || || || || ||||| || | || || || | || | || || || || Sbjct 3303 ACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCTACTAAGTT 3362 Query 19353 TTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTT 19412 |||||||| || |||||| ||| ||||| |||||||| ||||| || ||||||||||| Sbjct 3363 CTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGCTTGATAAAATGTTT 3422 Query 19413 TTC---ATCTGAGGTTAATGTATTCCAATC 19439 ||| |||| ||||||| | |||||| Sbjct 3423 TTCACAATCT---TTTAATGTCTCCCAATC 3449 Score = 93.3 bits (102), Expect = 5e-14 Identities = 83/103 (81%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 19442 TAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTAT 19501 ||||| ||| ||||| ||||||||||| | |||||||| || || || |||||||||| Sbjct 3600 TAATACCTTG-GATAAGTCTACTTCTTCCGCAGTCCAAAACGATGCTTCAGCTTTTTTAT 3658 Query 19502 ACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAA 19544 |||| | |||||| || ||||||| || || |||||||| || Sbjct 3659 ACATCTGCCATATGTCTGGATATTGGATTGGGAATATAACGAA 3701 >seq242670 Length=698 Score = 91.5 bits (100), Expect = 2e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 48744 TTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTAT 48803 || || | ||| ||||| | ||||||| ||||||| |||||||||||||||||||||||| Sbjct 391 TTATTGTCTATCTTCAACAAATATGATCTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 450 Query 48804 GAAAAGTCGTTATCATTAATAATTGATGAATTTATTCTTTCCTTATGTTT 48853 ||| || |||||| || ||| | || | || | | ||||||| ||| Sbjct 451 TTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTATTTTT 500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557666903840640