Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27]
632,176 sequences; 365,010,054 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq227148 511 5e-140
seq36366 132 5e-26
seq242670 91.5 2e-13
>seq227148
Length=2115
Score = 511 bits (566), Expect = 5e-140
Identities = 1186/1786 (66%), Gaps = 33/1786 (2%)
Strand=Plus/Minus
Query 46972 CTTTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATAC 47031
|||| || |||||||||| ||| | ||| |||| |||||| ||||| || ||||| |
Sbjct 1829 CTTTATCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTCCGTAAGTAGTACATTC 1770
Query 47032 CAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAG 47091
| || |||||||| | |||| | | |||||| ||| |||| ||| ||| |||
Sbjct 1769 CTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATAGACGTTAGTTTCCCATAGTTAG 1710
Query 47092 GTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTG 47151
||| | || ||| || |||| |||||| || || || ||||| || ||||||||||| |
Sbjct 1709 GTTTAGCAACATGTATGTTAAAAGATTGGCTTTGGTCTATAAACGCTCCTCTATCAGCCG 1650
Query 47152 CCATATCTAAAATAACCCTTT--GTGGTATCTCCCATACTGTTTTATAAATTTGTTTAAT 47209
|||| | || | ||| ||| ||||||||||| ||||| || | | | | ||
Sbjct 1649 CCATCTGTATGG--ATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCTCTTAT 1592
Query 47210 GTCTTCTGGGAGATTAG---TATTTTGAATAGATCCTCCgttttctataattttgttttt 47266
|||| || | || | ||| ||| |||||||| ||| | || || |||||
Sbjct 1591 TTCTTTAGGAATTTTTGCAATATCTTGTATAGATCCATTGTTGTAAATTATAAGATTTTT 1532
Query 47267 taattcatttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAAT 47326
| || | ||| | | ||| || | | ||| ||| | || || |
Sbjct 1531 CATATCTTCATCCCATAAATCAGCCCGAGTCAAATCAGTGAGAAGGTGATGGTTCACTAC 1472
Query 47327 TTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGA 47386
||||||||||||||| ||||| | || ||||| |||| | ||||| | |||
Sbjct 1471 AGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAAAGA 1412
Query 47387 TTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCT 47446
|||| | || |||| |||||| ||||| || || || ||||| | || | || |
Sbjct 1411 TTCAGTGTTACCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGGGCTATCAACAGAGA 1352
Query 47447 ATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGA 47506
||| | | || | |||| ||||| ||| |||||||| ||||
Sbjct 1351 ATTGCGCAAACCGTGTTTTCCTATCTTGTCTTTGAGGGCAGCCCAGTCCCAAAGGTCTGT 1292
Query 47507 TGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATA 47566
||| | ||| | |||||| || || || |||| ||| ||| || | |||
Sbjct 1291 AGGAGTTTTGTCCCACATATCATACTGTAGGATACCTTGGCTTGCTGGACTCCCTTGATA 1232
Query 47567 TGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATA 47626
||| | || | || | | || || | ||||||||| ||||| ||||||| ||||||
Sbjct 1231 TGTGCTGTATGTGCCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCACCATAATA 1172
Query 47627 TATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGATGATTCAAAAGGATANNN 47686
|||||||||||||||| | || |||| |||||| | ||| ||||
Sbjct 1171 AATTGTTTCAAATATTTGTTGATTGAGATGTATTGCTTTTTCACTTTCGTAAGGTATTCT 1112
Query 47687 NNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTTTT 47746
|| | |||||||| || ||||||||||||||||| ||||| || | |
Sbjct 1111 CATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCTGTGTCTCAT 1052
Query 47747 ATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAGANN 47806
||| ||| | ||||| || | ||||| ||| | ||| || | ||| |||| |
Sbjct 1051 ATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTTTGTTTAAATT 992
Query 47807 NNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAACTTGTTATTTATAAC 47866
|||||| |||| || ||||||| ||| | |||||| |||
Sbjct 991 TTGAGTTACAATCTTTGTGATTTCTTTTAACTTTTTAAAATTAAATCTCTTATTTTCAAC 932
Query 47867 AAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATA 47926
|||| | ||||||||||| || || || ||||| || || || || | | ||| ||
Sbjct 931 AAACATGTTAAGTGCTATGGAAGCAAGGTTACAAACTGCCACTTCTTCTTCTGAAGTGTA 872
Query 47927 TTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATT 47986
||| | | |||| || ||||| | |||||| || || || | ||||| |||||| |
Sbjct 871 TTGCACAACCTCAGTGCAAAGATTGCTACATTTAATTGTGCCAAGATTTTTTTGATTACT 812
Query 47987 NNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTC 48046
||||||| || ||||| || | ||| | ||||| ||||| |||| || | |||
Sbjct 811 CTTCCTGTTACAAGCATCCTTATATAACATGTATGGTGTACCAGTCTCTACTTGGGCTTC 752
Query 48047 AATGATAGATTTCCAAACAGTCCT-AGC-----CTT-TATAACAGCTCTAGCTTTATTAT 48099
|| || || ||||| | | || | ||| ||| | | | | || | ||
Sbjct 751 TATAATTGACTTCCATA-ACTCTTGAGCTCGGACTTGTTTTATAAATCGTGTTT------ 699
Query 48100 CATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATT-ATCTAACCCA 48158
| | ||| ||||| ||||||| | || ||||| || ||||| ||| | | | | ||
Sbjct 698 CTTCTTCATATTTGGTATATAGTTCTTCGAATTCCTCTCCATA-ACAGTCAGCGAGGCCG 640
Query 48159 GGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAAT 48218
||||| |||| ||||||||| | |||| | |||||||||| |||||| |||||||
Sbjct 639 GGACAATCATGAGGACACATGAGACTCCAAACGTCATCATTTTCTACTCTTTTCATAAAC 580
Query 48219 ATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTA 48278
| ||| || ||||| | ||| ||| | || |||| ||| | |||||| || || ||
Sbjct 579 AGATCAGGAATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTA 520
Query 48279 TTCCT-TTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGC 48337
||| | ||||| | ||||| || | ||| || |||||||| || |||||||| |||||
Sbjct 519 TTCTTCTTTAAATCTAAGAAC-TCAAATATGTCCGCATGCCAAGGCTCTAAATAAATTGC 461
Query 48338 CATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAAC 48397
| | |||| || ||||| || || |||||||||| ||||||||||||||||||||| ||
Sbjct 460 AAATGCACCAGGGCGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTATACAC 401
Query 48398 TCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACT 48457
||| |||||||| || | |||||| || | ||||| || || | || ||| ||
Sbjct 400 TCTCAACATTGGCACTAGACCATTCGAGACGCCATTAGTGCCAGCTATGTAAGAACCCTG 341
Query 48458 AGCTCTTAT---ATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGC 48514
|||||| || || || || || |||||| ||||| || |||||| |||| ||
Sbjct 340 AGCTCTGATGCAATGTGTA--TGTAA-ACCTATGCCACCAGCAGATTTAGAAATTAATGC 284
Query 48515 ACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAA 48574
|||| |||| | |||||| |||| ||||| || ||||| ||| ||||| || || ||
Sbjct 283 ACACTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAA 224
Query 48575 ACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAAT 48634
||| || | || || | || ||| || | ||| || ||| || |
Sbjct 223 GCAAGAGGAAAGCTGTGGCCGTGGTGTAGCTGCTGAGAACAGTGTAGGGCTTGCGTGTGT 164
Query 48635 AAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATC-CCATTGAT 48693
||| ||||||| || | || ||||| || | || || ||| || || || | |
Sbjct 163 AAAATATTTCTCCGACATCATATTATAAGTATTGATTGCACTATCAATGTCTTCACCG-T 105
Query 48694 GTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAAC 48739
| |||||||| || || | ||| | ||| | |||||||||||||||
Sbjct 104 GAATACCTATTGAGACTCTCATAAGCATGTGTTGAGGTCTTTCAAC 59
>seq36366
Length=4232
Score = 132 bits (146), Expect = 5e-26
Identities = 156/210 (74%), Gaps = 6/210 (3%)
Strand=Plus/Plus
Query 19233 ATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAA 19292
||||| || || |||||| |||||| |||||||||| |||||| ||||| || |||||
Sbjct 3243 ATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGAAA 3302
Query 19293 TCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATT 19352
|| || || || || ||||| || | || || || | || | || || || ||
Sbjct 3303 ACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCTACTAAGTT 3362
Query 19353 TTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTT 19412
|||||||| || |||||| ||| ||||| |||||||| ||||| || |||||||||||
Sbjct 3363 CTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGCTTGATAAAATGTTT 3422
Query 19413 TTC---ATCTGAGGTTAATGTATTCCAATC 19439
||| |||| ||||||| | ||||||
Sbjct 3423 TTCACAATCT---TTTAATGTCTCCCAATC 3449
Score = 93.3 bits (102), Expect = 5e-14
Identities = 83/103 (81%), Gaps = 1/103 (1%)
Strand=Plus/Plus
Query 19442 TAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTAT 19501
||||| ||| ||||| ||||||||||| | |||||||| || || || ||||||||||
Sbjct 3600 TAATACCTTG-GATAAGTCTACTTCTTCCGCAGTCCAAAACGATGCTTCAGCTTTTTTAT 3658
Query 19502 ACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAA 19544
|||| | |||||| || ||||||| || || |||||||| ||
Sbjct 3659 ACATCTGCCATATGTCTGGATATTGGATTGGGAATATAACGAA 3701
>seq242670
Length=698
Score = 91.5 bits (100), Expect = 2e-13
Identities = 86/110 (78%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 48744 TTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTAT 48803
|| || | ||| ||||| | ||||||| ||||||| ||||||||||||||||||||||||
Sbjct 391 TTATTGTCTATCTTCAACAAATATGATCTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 450
Query 48804 GAAAAGTCGTTATCATTAATAATTGATGAATTTATTCTTTCCTTATGTTT 48853
||| || |||||| || ||| | || | || | | ||||||| |||
Sbjct 451 TTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTATTTTT 500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 557666903840640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |