Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq36366 149 7e-31 seq171781 95.1 1e-14 >seq36366 Length=4232 Score = 149 bits (164), Expect = 7e-31 Identities = 162/213 (76%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 37444 TTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCT 37503 ||||||| || ||||||| |||| ||||| || || |||| |||||| ||||| || | Sbjct 3239 TTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTT 3298 Query 37504 GAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATC--GTTAAAAAACCTCTTAGC 37561 |||||||||| || ||||| ||||||| | |||||| || || | ||| |||| | Sbjct 3299 GAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCT--AC 3356 Query 37562 TAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAA 37621 |||||| |||||||| || |||||| ||| |||||||| || | |||| || ||||| Sbjct 3357 TAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGCTTGATAAA 3416 Query 37622 ATGTCTTTCATCATTTGATAATTTTTTCCAATC 37654 |||| ||||| || | |||| | | |||||| Sbjct 3417 ATGTTTTTCACAATCTTTTAATGTCTCCCAATC 3449 Score = 86.0 bits (94), Expect = 7e-12 Identities = 115/159 (72%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 37170 AATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAG 37229 |||||| || ||||| || | || |||| |||| ||| || | |||||| || Sbjct 2329 AATAAAAATAAAAAATTACTAAATATACCT-CATCCCTAGAAATAAGTTCATTGCTGAAA 2387 Query 37230 GTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAA 37289 || ||||| ||||| | ||| | |||||| | ||||||||||| ||||| || || Sbjct 2388 GTCAATCCGGGCATCAGACCACGTTTTTTCAACCAAAATATTGAAGCAAAGCTGCCTGAG 2447 Query 37290 AAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGT 37328 || || || ||||||||||| ||||| || | || |||| Sbjct 2448 AAAAATATTCCTTCAACTGCCGCAAAAGCAATAATACGT 2486 >seq171781 Length=988 Score = 95.1 bits (104), Expect = 1e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 153288 GGTGTTTTACATACAAAATTTTGGATAGTTGATAATAAACATGTATATATAGGAAGTGCT 153347 || || ||||||||||| || |||||||| ||| |||||| | ||||| || |||||| Sbjct 501 GGAGTGTTACATACAAAGTTCTGGATAGTCGATCGAAAACATTTCTATATTGGTAGTGCT 560 Query 153348 AATATGGATTGGAGATCACTAACTCAAGTAAA 153379 |||||||| ||||| ||||| ||||| ||||| Sbjct 561 AATATGGACTGGAGGTCACTCACTCAGGTAAA 592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587636194183040