Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq227148 188 4e-43 >seq227148 Length=2115 Score = 188 bits (208), Expect = 4e-43 Identities = 279/395 (71%), Gaps = 3/395 (1%) Strand=Plus/Minus Query 25910 TCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAA 25969 ||| |||||| | ||| | | |||||| | ||| |||||||| | |||||||| | Sbjct 606 TCATCATTTT---CTACTCTTTTCATAAACAGATCAGGAATCCATAAAGCATAAAACAGT 550 Query 25970 TCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATA 26029 ||||| |||||||||||||| || || |||||| |||| ||||||||| ||||| || Sbjct 549 TCTCTAGCTCTCATTTCTTCCTTACCTGTATTCTTCTTTAAATCTAAGAACTCAAATATG 490 Query 26030 TCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGA 26089 || | ||||| || |||||||| || ||||| ||| | ||| |||||||||| Sbjct 489 TCCGCATGCCAAGGCTCTAAATAAATTGCAAATGCACCAGGGCGTTTGTTTCCACCTTGA 430 Query 26090 TCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAAT 26149 ||||| ||||| ||||| | || | ||| |||||||||| |||| ||| | || | Sbjct 429 TCTACATATCTGGCAGTATTGTTATACACTCTCAACATTGGCACTAGACCATTCGAGACG 370 Query 26150 CCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATT 26209 || || |||| | || | || || | ||| || || | ||| | ||| || Sbjct 369 CCATTAGTGCCAGCTATGTAAGAACCCTGAGCTCTGATGCAATGTGTATGTAAACCTATG 310 Query 26210 CCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATG 26269 |||||||| |||| ||||| |||||| | | | ||||| ||||| |||| ||| Sbjct 309 CCACCAGCAGATTTAGAAATTAATGCACACTGTTTTAAAGTATCAAAAATACCTTCAATG 250 Query 26270 CTATCACCTTTCATTCCTAATAAAAAACAAGAAGA 26304 ||||| ||||||| ||| | || ||||| || Sbjct 249 CTATCGTCTTTCATAGCTATAAGGAAGCAAGAGGA 215 Score = 109 bits (120), Expect = 3e-19 Identities = 342/519 (66%), Gaps = 18/519 (3%) Strand=Plus/Minus Query 24649 ATTTT--CTTTTTCTAATGTAAATTGCTTAGCTGATACTGCTGGTTTAGTTC-TAAGATA 24705 ||||| |||| |||| ||||| || |||| | |||||||||| || | |||| || Sbjct 1836 ATTTTACCTTTATCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTCCGTAAG-TA 1778 Query 24706 ATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTTTTGC 24765 |||||||| ||||| || | | |||||| ||| ||||| || || |||||||| | Sbjct 1777 GTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATAGACGTTAGTTTCCC 1718 Query 24766 AATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTTGTCT 24825 | ||| | | | | | | ||| | ||||| |||| | ||| | ||| Sbjct 1717 ATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGGCTTTGGTCTATAAACGCTCCTCT 1658 Query 24826 ATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTGTTTTGTATCTCTC 24885 ||| || || | | ||| ||||||| || || || | | |||||||| || Sbjct 1657 ATCAGCCGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATC 1598 Query 24886 TTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATTTTCTCTCAAT----A 24941 | |||| || | ||||| ||||||||| ||| | |||||||| | | | ||| | Sbjct 1597 TCTTATTTCTTTAGGAATTTTTGCAATATCTTGTATAGATCCATTGT-TGTAAATTATAA 1539 Query 24942 GATTCAATCTCATATTCGGTGTCCAAAGATTAATTTTT-TCAAGATCTCTAATCAAGTGT 25000 |||| | |||||| ||| | || | |||| ||| | | | ||| Sbjct 1538 GATT---TTTCATATCTTCATCCCATAAATCAGCCCGAGTCAA-ATCAGTGAGAAGGTGA 1483 Query 25001 TTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAA--GTTTGAAGTGA 25058 | || | | | |||||||||||| || |||||||| ||| ||| ||||| || | Sbjct 1482 TGGTTCACTACAGGAAATTCTCCAGATAAGACTCTTCT--TTGGTAAATATTTGATGTAA 1425 Query 25059 ATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATG 25118 | ||||||||| ||||| | || || | ||||| | |||||| || || ||||| | Sbjct 1424 AGGGTTCAAAAGATTCAGTGTTACCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGGG 1365 Query 25119 CTATTAATAGCGAATTTCTCAAACCATATTTAACAATCT 25157 |||| || || ||||| | |||||| | ||| | |||| Sbjct 1364 CTATCAACAGAGAATTGCGCAAACCGTGTTTTCCTATCT 1326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 251090416629200