Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27]
632,176 sequences; 365,010,054 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq227148 188 4e-43
>seq227148
Length=2115
Score = 188 bits (208), Expect = 4e-43
Identities = 279/395 (71%), Gaps = 3/395 (1%)
Strand=Plus/Minus
Query 25910 TCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAA 25969
||| |||||| | ||| | | |||||| | ||| |||||||| | |||||||| |
Sbjct 606 TCATCATTTT---CTACTCTTTTCATAAACAGATCAGGAATCCATAAAGCATAAAACAGT 550
Query 25970 TCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATA 26029
||||| |||||||||||||| || || |||||| |||| ||||||||| ||||| ||
Sbjct 549 TCTCTAGCTCTCATTTCTTCCTTACCTGTATTCTTCTTTAAATCTAAGAACTCAAATATG 490
Query 26030 TCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGA 26089
|| | ||||| || |||||||| || ||||| ||| | ||| ||||||||||
Sbjct 489 TCCGCATGCCAAGGCTCTAAATAAATTGCAAATGCACCAGGGCGTTTGTTTCCACCTTGA 430
Query 26090 TCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAAT 26149
||||| ||||| ||||| | || | ||| |||||||||| |||| ||| | || |
Sbjct 429 TCTACATATCTGGCAGTATTGTTATACACTCTCAACATTGGCACTAGACCATTCGAGACG 370
Query 26150 CCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATT 26209
|| || |||| | || | || || | ||| || || | ||| | ||| ||
Sbjct 369 CCATTAGTGCCAGCTATGTAAGAACCCTGAGCTCTGATGCAATGTGTATGTAAACCTATG 310
Query 26210 CCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATG 26269
|||||||| |||| ||||| |||||| | | | ||||| ||||| |||| |||
Sbjct 309 CCACCAGCAGATTTAGAAATTAATGCACACTGTTTTAAAGTATCAAAAATACCTTCAATG 250
Query 26270 CTATCACCTTTCATTCCTAATAAAAAACAAGAAGA 26304
||||| ||||||| ||| | || ||||| ||
Sbjct 249 CTATCGTCTTTCATAGCTATAAGGAAGCAAGAGGA 215
Score = 109 bits (120), Expect = 3e-19
Identities = 342/519 (66%), Gaps = 18/519 (3%)
Strand=Plus/Minus
Query 24649 ATTTT--CTTTTTCTAATGTAAATTGCTTAGCTGATACTGCTGGTTTAGTTC-TAAGATA 24705
||||| |||| |||| ||||| || |||| | |||||||||| || | |||| ||
Sbjct 1836 ATTTTACCTTTATCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTCCGTAAG-TA 1778
Query 24706 ATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTTTTGC 24765
|||||||| ||||| || | | |||||| ||| ||||| || || |||||||| |
Sbjct 1777 GTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATAGACGTTAGTTTCCC 1718
Query 24766 AATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTTGTCT 24825
| ||| | | | | | | ||| | ||||| |||| | ||| | |||
Sbjct 1717 ATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGGCTTTGGTCTATAAACGCTCCTCT 1658
Query 24826 ATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTGTTTTGTATCTCTC 24885
||| || || | | ||| ||||||| || || || | | |||||||| ||
Sbjct 1657 ATCAGCCGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATC 1598
Query 24886 TTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATTTTCTCTCAAT----A 24941
| |||| || | ||||| ||||||||| ||| | |||||||| | | | ||| |
Sbjct 1597 TCTTATTTCTTTAGGAATTTTTGCAATATCTTGTATAGATCCATTGT-TGTAAATTATAA 1539
Query 24942 GATTCAATCTCATATTCGGTGTCCAAAGATTAATTTTT-TCAAGATCTCTAATCAAGTGT 25000
|||| | |||||| ||| | || | |||| ||| | | | |||
Sbjct 1538 GATT---TTTCATATCTTCATCCCATAAATCAGCCCGAGTCAA-ATCAGTGAGAAGGTGA 1483
Query 25001 TTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAA--GTTTGAAGTGA 25058
| || | | | |||||||||||| || |||||||| ||| ||| ||||| || |
Sbjct 1482 TGGTTCACTACAGGAAATTCTCCAGATAAGACTCTTCT--TTGGTAAATATTTGATGTAA 1425
Query 25059 ATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATG 25118
| ||||||||| ||||| | || || | ||||| | |||||| || || ||||| |
Sbjct 1424 AGGGTTCAAAAGATTCAGTGTTACCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGGG 1365
Query 25119 CTATTAATAGCGAATTTCTCAAACCATATTTAACAATCT 25157
|||| || || ||||| | |||||| | ||| | ||||
Sbjct 1364 CTATCAACAGAGAATTGCGCAAACCGTGTTTTCCTATCT 1326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 251090416629200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |